RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 RASA1P20936 1047 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 C16orf86Q6ZW13 317 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 RRAGDQ9NQL2 400 aaPredicted RBP9.56□□□□□ -0.88
RAB5B-210ENST00000553116 DACT1Q9NYF0 836 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 V9GY48 417 aaPredicted RBP9.56□□□□□ -0.88
RAB5B-210ENST00000553116 NT5C2P49902 561 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 CACNB3P54284 484 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 TCP10Q12799 353 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 CDC42EP5Q6NZY7 148 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 HHIPL2Q6UWX4 724 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 DGKHQ86XP1 1220 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 DIS3L2Q8IYB7 885 aaKnown RBP9.56□□□□□ -0.88
RAB5B-210ENST00000553116 RTKN2Q8IZC4 609 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 TRIM34Q9BYJ4 488 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 CLIC4Q9Y696 253 aa9.56□□□□□ -0.88
RAB5B-210ENST00000553116 DACT2Q5SW24 774 aa9.55□□□□□ -0.88
RAB5B-210ENST00000553116 TMTC3Q6ZXV5 915 aa9.55□□□□□ -0.88
RAB5B-210ENST00000553116 PGBD1Q96JS3 809 aa9.55□□□□□ -0.88
RAB5B-210ENST00000553116 TNMDQ9H2S6 317 aa9.55□□□□□ -0.88
RAB5B-210ENST00000553116 BRMS1Q9HCU9 246 aa9.55□□□□□ -0.88
RAB5B-210ENST00000553116 DDX4Q9NQI0 724 aaKnown RBP9.55□□□□□ -0.88
RAB5B-210ENST00000553116 ZNF277Q9NRM2 450 aaPredicted RBP9.55□□□□□ -0.88
RAB5B-210ENST00000553116 IL17RBQ9NRM6 502 aa9.55□□□□□ -0.88
RAB5B-210ENST00000553116 VPS54Q9P1Q0 977 aa9.55□□□□□ -0.88
RAB5B-210ENST00000553116 FOCADQ5VW36 1801 aa9.55□□□□□ -0.88
RAB5B-210ENST00000553116 MPHOSPH10O00566 681 aaKnown RBP9.55□□□□□ -0.88
RAB5B-210ENST00000553116 WDHD1O75717 1129 aaPredicted RBP9.55□□□□□ -0.88
RAB5B-210ENST00000553116 ATP2B1P20020 1258 aa9.55□□□□□ -0.88
RAB5B-210ENST00000553116 NBPF11Q86T75 865 aa9.55□□□□□ -0.88
RAB5B-210ENST00000553116 CCAR1Q8IX12 1150 aaKnown RBP9.55□□□□□ -0.88
RAB5B-210ENST00000553116 KCNG4Q8TDN1 519 aa9.55□□□□□ -0.88
RAB5B-210ENST00000553116 C7orf43Q8WVR3 580 aa9.55□□□□□ -0.88
RAB5B-210ENST00000553116 DDX19AQ9NUU7 478 aaKnown RBP9.55□□□□□ -0.88
RAB5B-210ENST00000553116 RCOR1Q9UKL0 485 aa9.55□□□□□ -0.88
RAB5B-210ENST00000553116 BTBD18B2RXH4 712 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 SPTLC2O15270 562 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 MMP1P03956 469 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 ANO1Q5XXA6 986 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 FSIP1Q8NA03 581 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 RTEL1Q9NZ71 1219 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 SERPINB13Q9UIV8 391 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 DDX60LQ5H9U9 1706 aaKnown RBP9.54□□□□□ -0.88
RAB5B-210ENST00000553116 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.54□□□□□ -0.88
RAB5B-210ENST00000553116 RAD17O75943 681 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 ATP2B2Q01814 1243 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 MAP3K11Q16584 847 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 RCSD1Q6JBY9 416 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 APOBEC3HQ6NTF7 200 aaKnown RBP9.54□□□□□ -0.88
RAB5B-210ENST00000553116 CCDC125Q86Z20 511 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 OSBPL5Q9H0X9 879 aaPredicted RBP9.54□□□□□ -0.88
RAB5B-210ENST00000553116 RBSNQ9H1K0 784 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 PCDHAC2Q9Y5I4 1007 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 PRPF3O43395 683 aaKnown RBP9.54□□□□□ -0.88
RAB5B-210ENST00000553116 KINO60870 393 aaKnown RBP9.54□□□□□ -0.88
RAB5B-210ENST00000553116 NR1I2O75469 434 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 NPM3O75607 178 aaKnown RBP9.54□□□□□ -0.88
RAB5B-210ENST00000553116 YEATS4O95619 227 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 MARCKSP29966 332 aaPredicted RBP9.54□□□□□ -0.88
RAB5B-210ENST00000553116 RBM10P98175 930 aaKnown RBP9.54□□□□□ -0.88
RAB5B-210ENST00000553116 NFIAQ12857 509 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 NOSTRINQ8IVI9 506 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 CKAP2LQ8IYA6 745 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 ZDHHC15Q96MV8 337 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 TMEM47Q9BQJ4 181 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.54□□□□□ -0.88
RAB5B-210ENST00000553116 POLR3EQ9NVU0 708 aa9.54□□□□□ -0.88
RAB5B-210ENST00000553116 CNTNAP5Q8WYK1 1306 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 EIF6P56537 245 aaKnown RBP9.53□□□□□ -0.88
RAB5B-210ENST00000553116 GRIPAP1Q4V328 841 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 SRBD1Q8N5C6 995 aaKnown RBP9.53□□□□□ -0.88
RAB5B-210ENST00000553116 LINC00301Q8NCQ3 95 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 CEP95Q96GE4 821 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 PIM2Q9P1W9 311 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 SNED1Q8TER0 1413 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 RAD21O60216 631 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 KRT2P35908 639 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 GNAQP50148 359 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 FKBP1AP62942 108 aaKnown RBP9.53□□□□□ -0.88
RAB5B-210ENST00000553116 NR5A1Q13285 461 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 R3HDM1Q15032 1099 aaKnown RBP9.53□□□□□ -0.88
RAB5B-210ENST00000553116 NIM1KQ8IY84 436 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 JMYQ8N9B5 988 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 RGS22Q8NE09 1264 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 NEDD1Q8NHV4 660 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 TCP11L1Q9NUJ3 509 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 PCDHA7Q9UN72 937 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 CFAP100Q494V2 611 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 SOGA3Q5TF21 947 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 MRPS27Q92552 414 aaKnown RBP9.53□□□□□ -0.88
RAB5B-210ENST00000553116 TMOD2Q9NZR1 351 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 SERPINA10Q9UK55 444 aa9.53□□□□□ -0.88
RAB5B-210ENST00000553116 YDJCA8MPS7 323 aa9.52□□□□□ -0.89
RAB5B-210ENST00000553116 GOLGA8HP0CJ92 632 aa9.52□□□□□ -0.89
RAB5B-210ENST00000553116 CCDC192P0DO97 292 aa9.52□□□□□ -0.89
RAB5B-210ENST00000553116 U2AF2P26368 475 aaKnown RBP eCLIP9.52□□□□□ -0.897e-6■■□□□ 14.4
RAB5B-210ENST00000553116 NLRP5P59047 1200 aa9.52□□□□□ -0.89
RAB5B-210ENST00000553116 STAG2Q8N3U4 1231 aa9.52□□□□□ -0.89
RAB5B-210ENST00000553116 OGFOD1Q8N543 542 aa9.52□□□□□ -0.89
RAB5B-210ENST00000553116 MTFR1LQ9H019 292 aa9.52□□□□□ -0.89
RAB5B-210ENST00000553116 FOXP1Q9H334 677 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms