RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 H0YGN5 161 aa12.79□□□□□ -0.36
DDX23-217ENST00000553065 POLR3DP05423 398 aaPredicted RBP12.79□□□□□ -0.36
DDX23-217ENST00000553065 PABPC4Q13310 644 aaKnown RBP eCLIP12.79□□□□□ -0.36
DDX23-217ENST00000553065 RAB3GAP1Q15042 981 aa12.79□□□□□ -0.36
DDX23-217ENST00000553065 ZYXQ15942 572 aaKnown RBP12.79□□□□□ -0.36
DDX23-217ENST00000553065 TSHZ3Q63HK5 1081 aa12.79□□□□□ -0.36
DDX23-217ENST00000553065 COA7Q96BR5 231 aa12.79□□□□□ -0.36
DDX23-217ENST00000553065 LRRCC1Q9C099 1032 aa12.79□□□□□ -0.36
DDX23-217ENST00000553065 KIAA1683Q9H0B3 1180 aa12.79□□□□□ -0.36
DDX23-217ENST00000553065 CRISPLD2Q9H0B8 497 aa12.79□□□□□ -0.36
DDX23-217ENST00000553065 TMOD4Q9NZQ9 345 aa12.79□□□□□ -0.36
DDX23-217ENST00000553065 BTBD7Q9P203 1132 aa12.79□□□□□ -0.36
DDX23-217ENST00000553065 BIN2Q9UBW5 565 aaPredicted RBP12.79□□□□□ -0.36
DDX23-217ENST00000553065 MBD4O95243 580 aa12.78□□□□□ -0.36
DDX23-217ENST00000553065 IGHA2P01877 340 aa12.78□□□□□ -0.36
DDX23-217ENST00000553065 ERVK-9P63128 1117 aa12.78□□□□□ -0.36
DDX23-217ENST00000553065 ERVK-24P63145 666 aa12.78□□□□□ -0.36
DDX23-217ENST00000553065 UBE3CQ15386 1083 aa12.78□□□□□ -0.36
DDX23-217ENST00000553065 HABP4Q5JVS0 413 aaKnown RBP12.78□□□□□ -0.36
DDX23-217ENST00000553065 MORN1Q5T089 497 aa12.78□□□□□ -0.36
DDX23-217ENST00000553065 C12orf60Q5U649 245 aa12.78□□□□□ -0.36
DDX23-217ENST00000553065 CLEC10AQ8IUN9 316 aa12.78□□□□□ -0.36
DDX23-217ENST00000553065 GPRC5AQ8NFJ5 357 aa12.78□□□□□ -0.36
DDX23-217ENST00000553065 OTUD7AQ8TE49 926 aaPredicted RBP12.78□□□□□ -0.36
DDX23-217ENST00000553065 TRIB2Q92519 343 aa12.78□□□□□ -0.36
DDX23-217ENST00000553065 DEFB118Q96PH6 123 aa12.78□□□□□ -0.36
DDX23-217ENST00000553065 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.78□□□□□ -0.36
DDX23-217ENST00000553065 CRNKL1Q9BZJ0 848 aaKnown RBP12.78□□□□□ -0.36
DDX23-217ENST00000553065 COLQQ9Y215 455 aaPredicted RBP12.78□□□□□ -0.36
DDX23-217ENST00000553065 USP17L15C9J2P7 530 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 USP17L13C9JLJ4 530 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 USP17L12C9JPN9 530 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 USP17L11C9JVI0 530 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 USP17L21D6R901 530 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 USP17L18D6R9N7 530 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 USP17L22D6RA61 530 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 USP17L17D6RBQ6 530 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 USP17L19D6RCP7 530 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 USP17L20D6RJB6 530 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 AKR1B1P15121 316 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 VCAM1P19320 739 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 CYP2B6P20813 491 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 UBXN2AP68543 259 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.37
DDX23-217ENST00000553065 USP17L24Q0WX57 530 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 CCL14Q16627 93 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 MAP3K21Q5TCX8 1036 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 CTR9Q6PD62 1173 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 LBX2Q6XYB7 198 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 OSBP2Q969R2 916 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 STRBPQ96SI9 672 aaKnown RBP12.77□□□□□ -0.37
DDX23-217ENST00000553065 TRIM34Q9BYJ4 488 aa12.77□□□□□ -0.37
DDX23-217ENST00000553065 GSG1L2A8MUP6 293 aa12.76□□□□□ -0.37
DDX23-217ENST00000553065 CDK8P49336 464 aa12.76□□□□□ -0.37
DDX23-217ENST00000553065 GPR142Q7Z601 462 aa12.76□□□□□ -0.37
DDX23-217ENST00000553065 DIS3LQ8TF46 1054 aaKnown RBP12.76□□□□□ -0.37
DDX23-217ENST00000553065 PRO3102Q9H379 93 aa12.76□□□□□ -0.37
DDX23-217ENST00000553065 CHMP4BQ9H444 224 aaKnown RBP12.76□□□□□ -0.37
DDX23-217ENST00000553065 ATP8A2Q9NTI2 1148 aa12.76□□□□□ -0.37
DDX23-217ENST00000553065 ECHDC1Q9NTX5 307 aa12.76□□□□□ -0.37
DDX23-217ENST00000553065 FLRT1Q9NZU1 646 aa12.76□□□□□ -0.37
DDX23-217ENST00000553065 TAOK2Q9UL54 1235 aa12.76□□□□□ -0.37
DDX23-217ENST00000553065 RLFQ13129 1914 aa12.76□□□□□ -0.37
DDX23-217ENST00000553065 SPDYE16A6NNV3 312 aaPredicted RBP12.75□□□□□ -0.37
DDX23-217ENST00000553065 XRCC5P13010 732 aaKnown RBP12.75□□□□□ -0.37
DDX23-217ENST00000553065 NKX2-3Q8TAU0 364 aa12.75□□□□□ -0.37
DDX23-217ENST00000553065 PI4K2BQ8TCG2 481 aa12.75□□□□□ -0.37
DDX23-217ENST00000553065 PAGR1Q9BTK6 254 aa12.75□□□□□ -0.37
DDX23-217ENST00000553065 RPAP3Q9H6T3 665 aaPredicted RBP12.75□□□□□ -0.37
DDX23-217ENST00000553065 CABP5Q9NP86 173 aa12.75□□□□□ -0.37
DDX23-217ENST00000553065 RABGAP1Q9Y3P9 1069 aa12.75□□□□□ -0.37
DDX23-217ENST00000553065 RPTORQ8N122 1335 aa12.74□□□□□ -0.37
DDX23-217ENST00000553065 SALL3Q9BXA9 1300 aa12.74□□□□□ -0.37
DDX23-217ENST00000553065 TFRCP02786 760 aaKnown RBP12.74□□□□□ -0.37
DDX23-217ENST00000553065 HMGCRP04035 888 aa12.74□□□□□ -0.37
DDX23-217ENST00000553065 CACNB2Q08289 660 aaPredicted RBP12.74□□□□□ -0.37
DDX23-217ENST00000553065 LHX8Q68G74 356 aa12.74□□□□□ -0.37
DDX23-217ENST00000553065 C16orf86Q6ZW13 317 aa12.74□□□□□ -0.37
DDX23-217ENST00000553065 KBTBD3Q8NAB2 608 aa12.74□□□□□ -0.37
DDX23-217ENST00000553065 PAWRQ96IZ0 340 aaKnown RBP12.74□□□□□ -0.37
DDX23-217ENST00000553065 SEC62Q99442 399 aaKnown RBP12.74□□□□□ -0.37
DDX23-217ENST00000553065 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.74□□□□□ -0.37
DDX23-217ENST00000553065 PCDH10Q9P2E7 1040 aa12.74□□□□□ -0.37
DDX23-217ENST00000553065 TMX2Q9Y320 296 aa12.74□□□□□ -0.37
DDX23-217ENST00000553065 SLC4A4Q9Y6R1 1079 aa12.74□□□□□ -0.37
DDX23-217ENST00000553065 LAMA3Q16787 3333 aa12.74□□□□□ -0.37
DDX23-217ENST00000553065 BAZ2AQ9UIF9 1905 aaKnown RBP12.74□□□□□ -0.37
DDX23-217ENST00000553065 FARP2O94887 1054 aaPredicted RBP12.73□□□□□ -0.37
DDX23-217ENST00000553065 PTPREP23469 700 aa12.73□□□□□ -0.37
DDX23-217ENST00000553065 MAPK4P31152 587 aa12.73□□□□□ -0.37
DDX23-217ENST00000553065 FXR1P51114 621 aaKnown RBP eCLIP12.73□□□□□ -0.37
DDX23-217ENST00000553065 USP14P54578 494 aa12.73□□□□□ -0.37
DDX23-217ENST00000553065 PLEKHH3Q7Z736 793 aa12.73□□□□□ -0.37
DDX23-217ENST00000553065 NPLOC4Q8TAT6 608 aa12.73□□□□□ -0.37
DDX23-217ENST00000553065 NUDT12Q9BQG2 462 aa12.73□□□□□ -0.37
DDX23-217ENST00000553065 EPB41L4AQ9HCS5 686 aaPredicted RBP12.73□□□□□ -0.37
DDX23-217ENST00000553065 OGDHLQ9ULD0 1010 aa12.73□□□□□ -0.37
DDX23-217ENST00000553065 NAV1Q8NEY1 1877 aa12.73□□□□□ -0.37
DDX23-217ENST00000553065 M0R2C6 588 aa12.72□□□□□ -0.37
DDX23-217ENST00000553065 MPHOSPH10O00566 681 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms