RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 PRDM10Q9NQV6 1147 aa13.96□□□□□ -0.17
TRAFD1-209ENST00000552896 TSKSQ9UJT2 592 aa13.96□□□□□ -0.17
TRAFD1-209ENST00000552896 SLC45A1Q9Y2W3 748 aa13.96□□□□□ -0.17
TRAFD1-209ENST00000552896 SLC3A2P08195 630 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-209ENST00000552896 GUCY1A2P33402 732 aa13.95□□□□□ -0.18
TRAFD1-209ENST00000552896 LBX1P52954 281 aa13.95□□□□□ -0.18
TRAFD1-209ENST00000552896 SPP2Q13103 211 aa13.95□□□□□ -0.18
TRAFD1-209ENST00000552896 MTMR2Q13614 643 aa13.95□□□□□ -0.18
TRAFD1-209ENST00000552896 RAB3GAP1Q15042 981 aa13.95□□□□□ -0.18
TRAFD1-209ENST00000552896 SH3D19Q5HYK7 790 aa13.95□□□□□ -0.18
TRAFD1-209ENST00000552896 DSCC1Q9BVC3 393 aa13.95□□□□□ -0.18
TRAFD1-209ENST00000552896 ANAPC4Q9UJX5 808 aa13.95□□□□□ -0.18
TRAFD1-209ENST00000552896 COL11A1P12107 1806 aaPredicted RBP13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 C19orf81C9J6K1 198 aa13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 USP17L10C9JJH3 530 aa13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 MPHOSPH10O00566 681 aaKnown RBP13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 AKR1B1P15121 316 aa13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 RASA1P20936 1047 aa13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 HMGCS2P54868 508 aa13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 BACE1P56817 501 aa13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 PDE4BQ07343 736 aa13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 CRHR2Q13324 411 aa13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 SEPT2Q15019 361 aa13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 TAF1CQ15572 869 aaPredicted RBP13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 GADL1Q6ZQY3 521 aa13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 FEZ1Q99689 392 aa13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 IL25Q9H293 177 aa13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 AGTPBP1Q9UPW5 1226 aa13.94□□□□□ -0.18
TRAFD1-209ENST00000552896 ADGRA2Q96PE1 1338 aa13.93□□□□□ -0.18
TRAFD1-209ENST00000552896 PDHXO00330 501 aa13.93□□□□□ -0.18
TRAFD1-209ENST00000552896 FGAP02671 866 aa13.93□□□□□ -0.18
TRAFD1-209ENST00000552896 ICA1Q05084 483 aa13.93□□□□□ -0.18
TRAFD1-209ENST00000552896 GPAT2Q6NUI2 795 aa13.93□□□□□ -0.18
TRAFD1-209ENST00000552896 C12orf42Q96LP6 360 aa13.93□□□□□ -0.18
TRAFD1-209ENST00000552896 PARK7Q99497 189 aaKnown RBP13.93□□□□□ -0.18
TRAFD1-209ENST00000552896 KIAA1683Q9H0B3 1180 aa13.93□□□□□ -0.18
TRAFD1-209ENST00000552896 MKNK2Q9HBH9 465 aa13.93□□□□□ -0.18
TRAFD1-209ENST00000552896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRAFD1-209ENST00000552896 SGSM2O43147 1006 aa13.92□□□□□ -0.18
TRAFD1-209ENST00000552896 TBC1D8O95759 1140 aa13.92□□□□□ -0.18
TRAFD1-209ENST00000552896 PCP11498 1178 aaKnown RBP13.92□□□□□ -0.18
TRAFD1-209ENST00000552896 USP14P54578 494 aa13.92□□□□□ -0.18
TRAFD1-209ENST00000552896 SH2D4AQ9H788 454 aa13.92□□□□□ -0.18
TRAFD1-209ENST00000552896 ZFYVE28Q9HCC9 887 aa13.92□□□□□ -0.18
TRAFD1-209ENST00000552896 ARHGEF10LQ9HCE6 1279 aa13.92□□□□□ -0.18
TRAFD1-209ENST00000552896 TMOD4Q9NZQ9 345 aa13.92□□□□□ -0.18
TRAFD1-209ENST00000552896 PNMA3Q9UL41 463 aa13.92□□□□□ -0.18
TRAFD1-209ENST00000552896 ORC4O43929 436 aa13.91□□□□□ -0.18
TRAFD1-209ENST00000552896 FGRP09769 529 aa13.91□□□□□ -0.18
TRAFD1-209ENST00000552896 CTDSPL2Q05D32 466 aa13.91□□□□□ -0.18
TRAFD1-209ENST00000552896 PABPC4Q13310 644 aaKnown RBP eCLIP13.91□□□□□ -0.18
TRAFD1-209ENST00000552896 TREML2Q5T2D2 321 aa13.91□□□□□ -0.18
TRAFD1-209ENST00000552896 USP17L2Q6R6M4 530 aa13.91□□□□□ -0.18
TRAFD1-209ENST00000552896 STK11IPQ8N1F8 1099 aa13.91□□□□□ -0.18
TRAFD1-209ENST00000552896 R3HDMLQ9H3Y0 253 aa13.91□□□□□ -0.18
TRAFD1-209ENST00000552896 KANSL2Q9H9L4 492 aa13.91□□□□□ -0.18
TRAFD1-209ENST00000552896 HTTP42858 3142 aa13.9□□□□□ -0.18
TRAFD1-209ENST00000552896 IGKV6D-41A0A0C4DH26 115 aa13.9□□□□□ -0.18
TRAFD1-209ENST00000552896 GPR25O00155 361 aa13.9□□□□□ -0.18
TRAFD1-209ENST00000552896 TLR2O60603 784 aa13.9□□□□□ -0.18
TRAFD1-209ENST00000552896 PRDM1O75626 825 aa13.9□□□□□ -0.18
TRAFD1-209ENST00000552896 DGKZQ13574 1117 aa13.9□□□□□ -0.18
TRAFD1-209ENST00000552896 CLEC10AQ8IUN9 316 aa13.9□□□□□ -0.18
TRAFD1-209ENST00000552896 ACER1Q8TDN7 264 aa13.9□□□□□ -0.18
TRAFD1-209ENST00000552896 STAG1Q8WVM7 1258 aa13.9□□□□□ -0.18
TRAFD1-209ENST00000552896 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRAFD1-209ENST00000552896 NBPF3Q9H094 633 aa13.9□□□□□ -0.18
TRAFD1-209ENST00000552896 CTNNA3Q9UI47 895 aa13.9□□□□□ -0.18
TRAFD1-209ENST00000552896 DOCK3Q8IZD9 2030 aa13.9□□□□□ -0.18
TRAFD1-209ENST00000552896 FKTNO75072 461 aa13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 CDC45O75419 566 aa13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 TSPY3P0CV98 308 aa13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 TSPY8P0CW00 308 aa13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 VCAM1P19320 739 aa13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 NT5C2P49902 561 aa13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 ZYXQ15942 572 aaKnown RBP13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 IMMTQ16891 758 aaKnown RBP13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 CASC1Q6TDU7 716 aa13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 TBC1D10CQ8IV04 446 aa13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 ZNF444Q8N0Y2 327 aaPredicted RBP13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 NEDD1Q8NHV4 660 aa13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 ZNF296Q8WUU4 475 aaPredicted RBP13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 ESYT1Q9BSJ8 1104 aa13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 RNF41Q9H4P4 317 aaPredicted RBP13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 EMILIN3Q9NT22 766 aa13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 SYNPO2Q9UMS6 1093 aa13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 PLXNB2O15031 1838 aa13.89□□□□□ -0.19
TRAFD1-209ENST00000552896 A0A1W2PRG0 241 aa13.88□□□□□ -0.19
TRAFD1-209ENST00000552896 ZNF213O14771 459 aa13.88□□□□□ -0.19
TRAFD1-209ENST00000552896 EEF2P13639 858 aaKnown RBP13.88□□□□□ -0.19
TRAFD1-209ENST00000552896 HOXA7P31268 230 aaPredicted RBP13.88□□□□□ -0.19
TRAFD1-209ENST00000552896 HAND2P61296 217 aa13.88□□□□□ -0.19
TRAFD1-209ENST00000552896 PPP4R3BQ5MIZ7 849 aa13.88□□□□□ -0.19
TRAFD1-209ENST00000552896 AKNAD1Q5T1N1 836 aa13.88□□□□□ -0.19
TRAFD1-209ENST00000552896 SMCR8Q8TEV9 937 aaPredicted RBP13.88□□□□□ -0.19
TRAFD1-209ENST00000552896 LPAR1Q92633 364 aa13.88□□□□□ -0.19
TRAFD1-209ENST00000552896 NYAP2Q9P242 653 aa13.88□□□□□ -0.19
TRAFD1-209ENST00000552896 TMX2Q9Y320 296 aa13.88□□□□□ -0.19
TRAFD1-209ENST00000552896 TACC3Q9Y6A5 838 aa13.88□□□□□ -0.19
TRAFD1-209ENST00000552896 NEDD4P46934 1319 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms