RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 CDK8P49336 464 aa13.17□□□□□ -0.3
CACNB3-224ENST00000552812 GABPAQ06546 454 aa13.17□□□□□ -0.3
CACNB3-224ENST00000552812 TNIP1Q15025 636 aa13.17□□□□□ -0.3
CACNB3-224ENST00000552812 SLC4A8Q2Y0W8 1093 aa13.17□□□□□ -0.3
CACNB3-224ENST00000552812 CFAP100Q494V2 611 aa13.17□□□□□ -0.3
CACNB3-224ENST00000552812 ZNF654Q8IZM8 581 aa13.17□□□□□ -0.3
CACNB3-224ENST00000552812 MTMR6Q9Y217 621 aa13.17□□□□□ -0.3
CACNB3-224ENST00000552812 ATP6V1DQ9Y5K8 247 aa13.17□□□□□ -0.3
CACNB3-224ENST00000552812 COL2A1P02458 1487 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-224ENST00000552812 HLA-DOAP06340 250 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 CALM1P0DP23 149 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 CALM2P0DP24 149 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 CALM3P0DP25 149 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 HOXB1P14653 301 aaPredicted RBP13.16□□□□□ -0.3
CACNB3-224ENST00000552812 RASA1P20936 1047 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 TFAP4Q01664 338 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 DGKHQ86XP1 1220 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 MTMR14Q8NCE2 650 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 RGS22Q8NE09 1264 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 ANKS1AQ92625 1134 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 EHD4Q9H223 541 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 SWAP70Q9UH65 585 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 SERPINB13Q9UIV8 391 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 ENTPD3O75355 529 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 DDAH1O94760 285 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 F13A1P00488 732 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 TSPY3P0CV98 308 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 TSPY8P0CW00 308 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 RPS12P25398 132 aaKnown RBP13.16□□□□□ -0.3
CACNB3-224ENST00000552812 NFIAQ12857 509 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 FAM47AQ5JRC9 791 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 CATIPQ7Z7H3 387 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 SLC44A5Q8NCS7 719 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 DDX11Q96FC9 970 aa13.16□□□□□ -0.3
CACNB3-224ENST00000552812 GOLGB1Q14789 3259 aaKnown RBP13.16□□□□□ -0.3
CACNB3-224ENST00000552812 PLIN4Q96Q06 1357 aa13.15□□□□□ -0.3
CACNB3-224ENST00000552812 VPS37CA5D8V6 355 aaPredicted RBP13.15□□□□□ -0.3
CACNB3-224ENST00000552812 DLGAP5Q15398 846 aa13.15□□□□□ -0.3
CACNB3-224ENST00000552812 RTN1Q16799 776 aa13.15□□□□□ -0.3
CACNB3-224ENST00000552812 FANCBQ8NB91 859 aa13.15□□□□□ -0.3
CACNB3-224ENST00000552812 PRMT6Q96LA8 375 aaPredicted RBP13.15□□□□□ -0.3
CACNB3-224ENST00000552812 MYL10Q9BUA6 226 aa13.15□□□□□ -0.3
CACNB3-224ENST00000552812 FHDC1Q9C0D6 1143 aaPredicted RBP13.15□□□□□ -0.3
CACNB3-224ENST00000552812 FAM217BQ9NTX9 383 aaPredicted RBP13.15□□□□□ -0.3
CACNB3-224ENST00000552812 TMOD2Q9NZR1 351 aa13.15□□□□□ -0.3
CACNB3-224ENST00000552812 FAM198AQ9UFP1 575 aa13.15□□□□□ -0.3
CACNB3-224ENST00000552812 PCDHAC2Q9Y5I4 1007 aa13.15□□□□□ -0.3
CACNB3-224ENST00000552812 ATRNL1Q5VV63 1379 aa13.15□□□□□ -0.31
CACNB3-224ENST00000552812 STK36Q9NRP7 1315 aa13.14□□□□□ -0.31
CACNB3-224ENST00000552812 FZD9O00144 591 aa13.14□□□□□ -0.31
CACNB3-224ENST00000552812 FDPSP14324 419 aaKnown RBP13.14□□□□□ -0.31
CACNB3-224ENST00000552812 RXRAP19793 462 aa13.14□□□□□ -0.31
CACNB3-224ENST00000552812 CDC27P30260 824 aa13.14□□□□□ -0.31
CACNB3-224ENST00000552812 ADD1P35611 737 aaKnown RBP13.14□□□□□ -0.31
CACNB3-224ENST00000552812 RASSF7Q02833 373 aa13.14□□□□□ -0.31
CACNB3-224ENST00000552812 NTRK3Q16288 839 aa13.14□□□□□ -0.31
CACNB3-224ENST00000552812 RCSD1Q6JBY9 416 aa13.14□□□□□ -0.31
CACNB3-224ENST00000552812 RAB11FIP4Q86YS3 637 aa13.14□□□□□ -0.31
CACNB3-224ENST00000552812 NEDD1Q8NHV4 660 aa13.14□□□□□ -0.31
CACNB3-224ENST00000552812 SPOCK2Q92563 424 aa13.14□□□□□ -0.31
CACNB3-224ENST00000552812 TDRD3Q9H7E2 651 aaKnown RBP13.14□□□□□ -0.31
CACNB3-224ENST00000552812 IL17RBQ9NRM6 502 aa13.14□□□□□ -0.31
CACNB3-224ENST00000552812 ORC3Q9UBD5 711 aaPredicted RBP13.14□□□□□ -0.31
CACNB3-224ENST00000552812 MYH8P13535 1937 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 H3BQV1 296 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 NMT2O60551 498 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 DTNBO60941 627 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 IFNAR1P17181 557 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 TROAPQ12815 778 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 IFFO2Q5TF58 517 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 FOXD4L5Q5VV16 416 aaPredicted RBP13.13□□□□□ -0.31
CACNB3-224ENST00000552812 FKBP1CQ5VVH2 108 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 CDC37L1Q7L3B6 337 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 FOXD4L4Q8WXT5 416 aaPredicted RBP13.13□□□□□ -0.31
CACNB3-224ENST00000552812 RNF166Q96A37 237 aaPredicted RBP13.13□□□□□ -0.31
CACNB3-224ENST00000552812 RBM28Q9NW13 759 aaKnown RBP13.13□□□□□ -0.31
CACNB3-224ENST00000552812 PI4KBQ9UBF8 816 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 CACNB3P54284 484 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 EIF6P56537 245 aaKnown RBP13.13□□□□□ -0.31
CACNB3-224ENST00000552812 DPY19L2Q6NUT2 758 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 ILDR2Q71H61 639 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 CCDC144CPQ8IYA2 1237 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 NUP133Q8WUM0 1156 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 ZBED3Q96IU2 234 aaPredicted RBP13.13□□□□□ -0.31
CACNB3-224ENST00000552812 MAP3K14Q99558 947 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 KAT14Q9H8E8 782 aa13.13□□□□□ -0.31
CACNB3-224ENST00000552812 MYO1BO43795 1136 aa13.12□□□□□ -0.31
CACNB3-224ENST00000552812 NOVP48745 357 aa13.12□□□□□ -0.31
CACNB3-224ENST00000552812 PRELPP51888 382 aa13.12□□□□□ -0.31
CACNB3-224ENST00000552812 ZNF280AP59817 542 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-224ENST00000552812 TCP10Q12799 353 aa13.12□□□□□ -0.31
CACNB3-224ENST00000552812 METTL16Q86W50 562 aaKnown RBP13.12□□□□□ -0.31
CACNB3-224ENST00000552812 FOXP4Q8IVH2 680 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-224ENST00000552812 TRIM22Q8IYM9 498 aa13.12□□□□□ -0.31
CACNB3-224ENST00000552812 DPF2Q92785 391 aa13.12□□□□□ -0.31
CACNB3-224ENST00000552812 CCDC17Q96LX7 622 aa13.12□□□□□ -0.31
CACNB3-224ENST00000552812 ZSCAN16Q9H4T2 348 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-224ENST00000552812 BOLA1Q9Y3E2 137 aa13.12□□□□□ -0.31
CACNB3-224ENST00000552812 SIPA1L1O43166 1804 aa13.12□□□□□ -0.31
CACNB3-224ENST00000552812 DICER1Q9UPY3 1922 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms