RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 AGTPBP1Q9UPW5 1226 aa11.73□□□□□ -0.53
PFDN5-218ENST00000552742 CCDC171Q6TFL3 1326 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 A0A1W2PRG0 241 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 HIP1O00291 1037 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 PRDM1O75626 825 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 FGAP02671 866 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 HSPD1P10809 573 aaKnown RBP11.72□□□□□ -0.53
PFDN5-218ENST00000552742 RASA1P20936 1047 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 CTDSPL2Q05D32 466 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 PPARAQ07869 468 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 ZYXQ15942 572 aaKnown RBP11.72□□□□□ -0.53
PFDN5-218ENST00000552742 USP17L2Q6R6M4 530 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 C17orf99Q6UX52 265 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 TMEM179Q6ZVK1 233 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 CLEC10AQ8IUN9 316 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 CD99L2Q8TCZ2 262 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.72□□□□□ -0.53
PFDN5-218ENST00000552742 TMOD4Q9NZQ9 345 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 SLC45A1Q9Y2W3 748 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 DOCK3Q8IZD9 2030 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 LOC285556D6RIA3 1793 aa11.72□□□□□ -0.53
PFDN5-218ENST00000552742 ADGRA2Q96PE1 1338 aa11.71□□□□□ -0.53
PFDN5-218ENST00000552742 ECM2O94769 699 aaPredicted RBP11.71□□□□□ -0.53
PFDN5-218ENST00000552742 CTU1Q7Z7A3 348 aaKnown RBP11.71□□□□□ -0.53
PFDN5-218ENST00000552742 ZNF444Q8N0Y2 327 aaPredicted RBP11.71□□□□□ -0.53
PFDN5-218ENST00000552742 PARK7Q99497 189 aaKnown RBP11.71□□□□□ -0.53
PFDN5-218ENST00000552742 P2RX7Q99572 595 aaKnown RBP11.71□□□□□ -0.53
PFDN5-218ENST00000552742 FEZ1Q99689 392 aa11.71□□□□□ -0.53
PFDN5-218ENST00000552742 MCOLN1Q9GZU1 580 aa11.71□□□□□ -0.53
PFDN5-218ENST00000552742 KIAA1683Q9H0B3 1180 aa11.71□□□□□ -0.53
PFDN5-218ENST00000552742 ASCC2Q9H1I8 757 aaPredicted RBP11.71□□□□□ -0.53
PFDN5-218ENST00000552742 TACC3Q9Y6A5 838 aa11.71□□□□□ -0.53
PFDN5-218ENST00000552742 ROBO3Q96MS0 1386 aa11.7□□□□□ -0.54
PFDN5-218ENST00000552742 SLC3A2P08195 630 aaKnown RBP11.7□□□□□ -0.54
PFDN5-218ENST00000552742 OSBPP22059 807 aa11.7□□□□□ -0.54
PFDN5-218ENST00000552742 CHMLP26374 656 aa11.7□□□□□ -0.54
PFDN5-218ENST00000552742 HOXA7P31268 230 aaPredicted RBP11.7□□□□□ -0.54
PFDN5-218ENST00000552742 MFAP1P55081 439 aaKnown RBP11.7□□□□□ -0.54
PFDN5-218ENST00000552742 ATP2B2Q01814 1243 aa11.7□□□□□ -0.54
PFDN5-218ENST00000552742 PDE4BQ07343 736 aa11.7□□□□□ -0.54
PFDN5-218ENST00000552742 PABPC4Q13310 644 aaKnown RBP eCLIP11.7□□□□□ -0.542e-11■■■■□ 23.3
PFDN5-218ENST00000552742 KIAA1755Q5JYT7 1200 aa11.7□□□□□ -0.54
PFDN5-218ENST00000552742 ERO1AQ96HE7 468 aa11.7□□□□□ -0.54
PFDN5-218ENST00000552742 ARHGAP39Q9C0H5 1083 aa11.7□□□□□ -0.54
PFDN5-218ENST00000552742 KANSL2Q9H9L4 492 aa11.7□□□□□ -0.54
PFDN5-218ENST00000552742 ZSWIM8A7E2V4 1837 aa11.7□□□□□ -0.54
PFDN5-218ENST00000552742 BCRP11274 1271 aa11.69□□□□□ -0.54
PFDN5-218ENST00000552742 EEF2P13639 858 aaKnown RBP11.69□□□□□ -0.54
PFDN5-218ENST00000552742 USP14P54578 494 aa11.69□□□□□ -0.54
PFDN5-218ENST00000552742 HAND2P61296 217 aa11.69□□□□□ -0.54
PFDN5-218ENST00000552742 ICA1Q05084 483 aa11.69□□□□□ -0.54
PFDN5-218ENST00000552742 FAM47AQ5JRC9 791 aa11.69□□□□□ -0.54
PFDN5-218ENST00000552742 OTOP1Q7RTM1 612 aa11.69□□□□□ -0.54
PFDN5-218ENST00000552742 SMCR8Q8TEV9 937 aaPredicted RBP11.69□□□□□ -0.54
PFDN5-218ENST00000552742 IL25Q9H293 177 aa11.69□□□□□ -0.54
PFDN5-218ENST00000552742 EFCC1Q9HA90 598 aa11.69□□□□□ -0.54
PFDN5-218ENST00000552742 ZNF287Q9HBT7 754 aa11.69□□□□□ -0.54
PFDN5-218ENST00000552742 ANAPC4Q9UJX5 808 aa11.69□□□□□ -0.54
PFDN5-218ENST00000552742 TRIM17Q9Y577 477 aa11.69□□□□□ -0.54
PFDN5-218ENST00000552742 MYH4Q9Y623 1939 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 MGAMO43451 1857 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 USP17L15C9J2P7 530 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 USP17L13C9JLJ4 530 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 USP17L11C9JVI0 530 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 USP17L18D6R9N7 530 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 USP17L22D6RA61 530 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 USP17L17D6RBQ6 530 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 USP17L19D6RCP7 530 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 USP17L20D6RJB6 530 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 PEX10O60683 326 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 CTGFP29279 349 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 IRX3P78415 501 aaPredicted RBP11.68□□□□□ -0.54
PFDN5-218ENST00000552742 LACTBP83111 547 aaPredicted RBP11.68□□□□□ -0.54
PFDN5-218ENST00000552742 TFAP4Q01664 338 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 USP17L24Q0WX57 530 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 ANKRD13CQ8N6S4 541 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 ABHD8Q96I13 439 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 C12orf42Q96LP6 360 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 ARHGEF10LQ9HCE6 1279 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 PPP4R2Q9NY27 417 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 PNMA3Q9UL41 463 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.68□□□□□ -0.54
PFDN5-218ENST00000552742 TMX2Q9Y320 296 aa11.68□□□□□ -0.54
PFDN5-218ENST00000552742 GREB1LQ9C091 1923 aaPredicted RBP11.68□□□□□ -0.54
PFDN5-218ENST00000552742 IGKV6D-41A0A0C4DH26 115 aa11.67□□□□□ -0.54
PFDN5-218ENST00000552742 RANBP6O60518 1105 aaKnown RBP11.67□□□□□ -0.54
PFDN5-218ENST00000552742 VCAM1P19320 739 aa11.67□□□□□ -0.54
PFDN5-218ENST00000552742 PSMC4P43686 418 aa11.67□□□□□ -0.54
PFDN5-218ENST00000552742 HERVK_113P62684 666 aa11.67□□□□□ -0.54
PFDN5-218ENST00000552742 KIF22Q14807 665 aa11.67□□□□□ -0.54
PFDN5-218ENST00000552742 POTEEQ6S8J3 1075 aa11.67□□□□□ -0.54
PFDN5-218ENST00000552742 CATSPERGQ6ZRH7 1159 aa11.67□□□□□ -0.54
PFDN5-218ENST00000552742 SPICE1Q8N0Z3 855 aa11.67□□□□□ -0.54
PFDN5-218ENST00000552742 NEDD1Q8NHV4 660 aa11.67□□□□□ -0.54
PFDN5-218ENST00000552742 RUFY2Q8WXA3 655 aa11.67□□□□□ -0.54
PFDN5-218ENST00000552742 TRIM47Q96LD4 638 aa11.67□□□□□ -0.54
PFDN5-218ENST00000552742 NBPF3Q9H094 633 aa11.67□□□□□ -0.54
PFDN5-218ENST00000552742 RPAP3Q9H6T3 665 aaPredicted RBP11.67□□□□□ -0.54
PFDN5-218ENST00000552742 RBPJLQ9UBG7 517 aa11.67□□□□□ -0.54
PFDN5-218ENST00000552742 CLIP2Q9UDT6 1046 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms