RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 ZBTB21Q9ULJ3 1066 aa10.47□□□□□ -0.73
CDK4-213ENST00000552713 PLXNA1Q9UIW2 1896 aa10.47□□□□□ -0.73
CDK4-213ENST00000552713 IGHA2P01877 340 aa10.46□□□□□ -0.73
CDK4-213ENST00000552713 CNGA1P29973 690 aa10.46□□□□□ -0.73
CDK4-213ENST00000552713 CYP2C19P33261 490 aa10.46□□□□□ -0.73
CDK4-213ENST00000552713 ZYXQ15942 572 aaKnown RBP10.46□□□□□ -0.73
CDK4-213ENST00000552713 GJC2Q5T442 439 aaPredicted RBP10.46□□□□□ -0.73
CDK4-213ENST00000552713 ANO1Q5XXA6 986 aa10.46□□□□□ -0.73
CDK4-213ENST00000552713 SH3RF1Q7Z6J0 888 aa10.46□□□□□ -0.73
CDK4-213ENST00000552713 CCAR1Q8IX12 1150 aaKnown RBP10.46□□□□□ -0.73
CDK4-213ENST00000552713 LPAR1Q92633 364 aa10.46□□□□□ -0.73
CDK4-213ENST00000552713 CDCA7LQ96GN5 454 aa10.46□□□□□ -0.73
CDK4-213ENST00000552713 SNRKQ9NRH2 765 aa10.46□□□□□ -0.73
CDK4-213ENST00000552713 SMC4Q9NTJ3 1288 aa10.46□□□□□ -0.73
CDK4-213ENST00000552713 BTBD7Q9P203 1132 aa10.46□□□□□ -0.73
CDK4-213ENST00000552713 SAP30BPQ9UHR5 308 aaKnown RBP10.46□□□□□ -0.73
CDK4-213ENST00000552713 NOB1Q9ULX3 412 aaKnown RBP10.46□□□□□ -0.73
CDK4-213ENST00000552713 AKAP2Q9Y2D5 859 aa10.46□□□□□ -0.73
CDK4-213ENST00000552713 ATP11BQ9Y2G3 1177 aa10.46□□□□□ -0.73
CDK4-213ENST00000552713 FLT1P17948 1338 aa10.46□□□□□ -0.73
CDK4-213ENST00000552713 MYH8P13535 1937 aa10.46□□□□□ -0.74
CDK4-213ENST00000552713 CDH23Q9H251 3354 aa10.45□□□□□ -0.74
CDK4-213ENST00000552713 ZNF236Q9UL36 1845 aa10.45□□□□□ -0.74
CDK4-213ENST00000552713 SRGAP3O43295 1099 aa10.45□□□□□ -0.74
CDK4-213ENST00000552713 GH2P01242 217 aa10.45□□□□□ -0.74
CDK4-213ENST00000552713 PTPREP23469 700 aa10.45□□□□□ -0.74
CDK4-213ENST00000552713 SLFN5Q08AF3 891 aa10.45□□□□□ -0.74
CDK4-213ENST00000552713 ALDH1L2Q3SY69 923 aa10.45□□□□□ -0.74
CDK4-213ENST00000552713 WDR78Q5VTH9 848 aa10.45□□□□□ -0.74
CDK4-213ENST00000552713 MFSD14CQ5VZR4 134 aa10.45□□□□□ -0.74
CDK4-213ENST00000552713 USP17L2Q6R6M4 530 aa10.45□□□□□ -0.74
CDK4-213ENST00000552713 SLC39A5Q6ZMH5 540 aa10.45□□□□□ -0.74
CDK4-213ENST00000552713 FOXP4Q8IVH2 680 aaPredicted RBP10.45□□□□□ -0.74
CDK4-213ENST00000552713 BADQ92934 168 aa10.45□□□□□ -0.74
CDK4-213ENST00000552713 DHX36Q9H2U1 1008 aaKnown RBP10.45□□□□□ -0.74
CDK4-213ENST00000552713 LRP2BPQ9P2M1 347 aa10.45□□□□□ -0.74
CDK4-213ENST00000552713 RABGAP1Q9Y3P9 1069 aa10.45□□□□□ -0.74
CDK4-213ENST00000552713 TCF20Q9UGU0 1960 aaKnown RBP10.45□□□□□ -0.74
CDK4-213ENST00000552713 GBF1Q92538 1859 aa10.44□□□□□ -0.74
CDK4-213ENST00000552713 A0A0G2JMZ2 1700 aa10.44□□□□□ -0.74
CDK4-213ENST00000552713 TRIM43BA6NCK2 446 aa10.44□□□□□ -0.74
CDK4-213ENST00000552713 SLC15A5A6NIM6 579 aa10.44□□□□□ -0.74
CDK4-213ENST00000552713 E9PSI1 815 aa10.44□□□□□ -0.74
CDK4-213ENST00000552713 DNM1LO00429 736 aa10.44□□□□□ -0.74
CDK4-213ENST00000552713 ANP32CO43423 234 aa10.44□□□□□ -0.74
CDK4-213ENST00000552713 CYBAP13498 195 aa10.44□□□□□ -0.74
CDK4-213ENST00000552713 ITGB8P26012 769 aa10.44□□□□□ -0.74
CDK4-213ENST00000552713 PPP4CP60510 307 aa10.44□□□□□ -0.74
CDK4-213ENST00000552713 DYNLL1P63167 89 aaKnown RBP10.44□□□□□ -0.74
CDK4-213ENST00000552713 GRB14Q14449 540 aa10.44□□□□□ -0.74
CDK4-213ENST00000552713 TRIM60Q495X7 471 aa10.44□□□□□ -0.74
CDK4-213ENST00000552713 NAA16Q6N069 864 aaPredicted RBP10.44□□□□□ -0.74
CDK4-213ENST00000552713 CRACR2BQ8N4Y2 399 aaPredicted RBP10.44□□□□□ -0.74
CDK4-213ENST00000552713 USP38Q8NB14 1042 aa10.44□□□□□ -0.74
CDK4-213ENST00000552713 ACER1Q8TDN7 264 aa10.44□□□□□ -0.74
CDK4-213ENST00000552713 TRIM43Q96BQ3 446 aaPredicted RBP10.44□□□□□ -0.74
CDK4-213ENST00000552713 CWC22Q9HCG8 908 aaKnown RBP10.44□□□□□ -0.74
CDK4-213ENST00000552713 PRDM5Q9NQX1 630 aaPredicted RBP10.44□□□□□ -0.74
CDK4-213ENST00000552713 RAPGEFL1Q9UHV5 662 aa10.44□□□□□ -0.74
CDK4-213ENST00000552713 FARP1Q9Y4F1 1045 aaPredicted RBP10.44□□□□□ -0.74
CDK4-213ENST00000552713 SPTBN5Q9NRC6 3674 aaKnown RBP10.44□□□□□ -0.74
CDK4-213ENST00000552713 USP17L15C9J2P7 530 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 USP17L13C9JLJ4 530 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 USP17L11C9JVI0 530 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 USP17L18D6R9N7 530 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 USP17L22D6RA61 530 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 USP17L17D6RBQ6 530 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 USP17L19D6RCP7 530 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 USP17L20D6RJB6 530 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 HOXC6P09630 235 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 EPHB4P54760 987 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 ATP2B2Q01814 1243 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 USP17L24Q0WX57 530 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 MTX1Q13505 466 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 GORABQ5T7V8 394 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 CATSPERGQ6ZRH7 1159 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 GTF3C2Q8WUA4 911 aaPredicted RBP10.43□□□□□ -0.74
CDK4-213ENST00000552713 C12orf42Q96LP6 360 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 PDLIM7Q9NR12 457 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 PRKAG2Q9UGJ0 569 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 MCM3APO60318 1980 aa10.43□□□□□ -0.74
CDK4-213ENST00000552713 NAV1Q8NEY1 1877 aa10.42□□□□□ -0.74
CDK4-213ENST00000552713 NCOR1O75376 2440 aa10.42□□□□□ -0.74
CDK4-213ENST00000552713 PNMA6EA0A0J9YXQ4 647 aa10.42□□□□□ -0.74
CDK4-213ENST00000552713 SPDYE16A6NNV3 312 aaPredicted RBP10.42□□□□□ -0.74
CDK4-213ENST00000552713 MSCO60682 206 aa10.42□□□□□ -0.74
CDK4-213ENST00000552713 BAG3O95817 575 aa10.42□□□□□ -0.74
CDK4-213ENST00000552713 CYP2E1P05181 493 aaPredicted RBP10.42□□□□□ -0.74
CDK4-213ENST00000552713 FOSL2P15408 326 aa10.42□□□□□ -0.74
CDK4-213ENST00000552713 VCAM1P19320 739 aa10.42□□□□□ -0.74
CDK4-213ENST00000552713 CCNA1P78396 465 aa10.42□□□□□ -0.74
CDK4-213ENST00000552713 SMAD3P84022 425 aaKnown RBP10.42□□□□□ -0.74
CDK4-213ENST00000552713 SNX17Q15036 470 aa10.42□□□□□ -0.74
CDK4-213ENST00000552713 PRAMEF19Q5SWL8 479 aa10.42□□□□□ -0.74
CDK4-213ENST00000552713 FERMT2Q96AC1 680 aa10.42□□□□□ -0.74
CDK4-213ENST00000552713 NOL10Q9BSC4 688 aaKnown RBP10.42□□□□□ -0.74
CDK4-213ENST00000552713 TRIM34Q9BYJ4 488 aa10.42□□□□□ -0.74
CDK4-213ENST00000552713 PIH1D3Q9NQM4 214 aaKnown RBP10.42□□□□□ -0.74
CDK4-213ENST00000552713 GINM1Q9NU53 330 aa10.42□□□□□ -0.74
CDK4-213ENST00000552713 TNNQ9UQP3 1299 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms