RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 GMPR2Q9P2T1 348 aaKnown RBP7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 USP20Q9Y2K6 914 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 MAP3K2Q9Y2U5 619 aa7.1□□□□□ -1.27
CHMP4A-210ENST00000552620 PHRF1Q9P1Y6 1649 aaKnown RBP7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 GRM8O00222 908 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 KCNQ3O43525 872 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 PHACTR2O75167 634 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 XYLBO75191 536 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 GADD45BO75293 160 aaPredicted RBP7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 MAP4K4O95819 1239 aaPredicted RBP7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 PTMAP06454 111 aaKnown RBP7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 CASTP20810 708 aaKnown RBP7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 PDCP20941 246 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 FIGNL1Q6PIW4 674 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 NOL8Q76FK4 1167 aaKnown RBP7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 MAP4K1Q92918 833 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 SETDB2Q96T68 719 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 IL25Q9H293 177 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 PDCL3Q9H2J4 239 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 ELP3Q9H9T3 547 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 BRD7Q9NPI1 651 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 DNMT3LQ9UJW3 386 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 KCNMB2Q9Y691 235 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 NFAT5O94916 1531 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 KDM3BQ7LBC6 1761 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 LMO7Q8WWI1 1683 aa7.09□□□□□ -1.27
CHMP4A-210ENST00000552620 CRYBG1Q9Y4K1 1723 aa7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 GCP02774 474 aa7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 PTH1RQ03431 593 aa7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 TRIP4Q15650 581 aaPredicted RBP7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 CREB3L3Q68CJ9 461 aa7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 PRPF40BQ6NWY9 871 aaKnown RBP7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 MPRIPQ6WCQ1 1025 aa7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 MTERF4Q7Z6M4 381 aaKnown RBP7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 AACSQ86V21 672 aa7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 JAKMIP1Q96N16 626 aaKnown RBP7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 CFHR5Q9BXR6 569 aa7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 NLRP2Q9NX02 1062 aa7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 HMG20BQ9P0W2 317 aa7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 FOXD3Q9UJU5 478 aaPredicted RBP7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 MTMR6Q9Y217 621 aa7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 PLEKHG2Q9H7P9 1386 aa7.08□□□□□ -1.28
CHMP4A-210ENST00000552620 CCDC171Q6TFL3 1326 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 DYNC1I1O14576 645 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 GIPC1O14908 333 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 SASH1O94885 1247 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 EGFRP00533 1210 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 EIF4BP23588 611 aaKnown RBP7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 GJB2P29033 226 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 KIAA2012Q0VF49 1180 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 NEXNQ0ZGT2 675 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 KRT32Q14532 448 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 SASS6Q6UVJ0 657 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 RNF214Q8ND24 703 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 ANKRD24Q8TF21 1146 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 PMEPA1Q969W9 287 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 CCDC74AQ96AQ1 378 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 CHAMP1Q96JM3 812 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 ZFYVE28Q9HCC9 887 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 METTL5Q9NRN9 209 aaKnown RBP7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 CNPY2Q9Y2B0 182 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 AK5Q9Y6K8 562 aa7.07□□□□□ -1.28
CHMP4A-210ENST00000552620 CHD2O14647 1828 aaKnown RBP7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 ELP1O95163 1332 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 FER1L4A9Z1Z3 1794 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 LTN1O94822 1766 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 H7C1W4 665 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 SLC27A2O14975 620 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 FAM157BP0CG42 384 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 KCNJ4P48050 445 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 ZC3H6P61129 1189 aaKnown RBP7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 KRT85P78386 507 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 TTC39BQ5VTQ0 682 aaPredicted RBP7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 LARP1BQ659C4 914 aaKnown RBP7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 BLOC1S2Q6QNY1 142 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 RIPOR1Q6ZS17 1223 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 CCDC83Q8IWF9 413 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 ZNF775Q96BV0 537 aaPredicted RBP7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 CHMP4CQ96CF2 233 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 CRELD1Q96HD1 420 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 SUCLG2Q96I99 432 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 C8orf37Q96NL8 207 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 FUCA2Q9BTY2 467 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 SCAND2PQ9GZW5 306 aaPredicted RBP7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 SENP2Q9HC62 589 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 COPRSQ9NQ92 184 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 RNF19AQ9NV58 838 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 ABI2Q9NYB9 513 aaPredicted RBP7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 USP25Q9UHP3 1055 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 KCNH4Q9UQ05 1017 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 R3HCC1Q9Y3T6 440 aaKnown RBP7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 RBM8AQ9Y5S9 174 aaKnown RBP7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 MST1RQ04912 1400 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 COL15A1P39059 1388 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 RFX7Q2KHR2 1363 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 SLIT3O75094 1523 aa7.06□□□□□ -1.28
CHMP4A-210ENST00000552620 NEURL1BA8MQ27 555 aa7.05□□□□□ -1.28
CHMP4A-210ENST00000552620 GOLGA6L6A8MZA4 724 aa7.05□□□□□ -1.28
CHMP4A-210ENST00000552620 ATXN7O15265 892 aaPredicted RBP7.05□□□□□ -1.28
CHMP4A-210ENST00000552620 ADCY5O95622 1261 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms