RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 MYL5Q02045 173 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 SF3A3Q12874 501 aaKnown RBP eCLIP12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 RASGRP2Q7LDG7 609 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 WDR66Q8TBY9 1149 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 FAM212AQ96EL1 285 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 CRACR2AQ9BSW2 395 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 AKR1B10O60218 316 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 UBE2SQ16763 222 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 NCAPH2Q6IBW4 605 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 CCDC70Q6NSX1 233 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 RIPOR2Q9Y4F9 1068 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 ZBTB7AO95365 584 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 MYCLP12524 364 aaPredicted RBP12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 U2AF2P26368 475 aaKnown RBP eCLIP12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 POSTNQ15063 836 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 SYCP1Q15431 976 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 CCDC84Q86UT8 332 aaPredicted RBP12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 RUFY1Q96T51 708 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 RABEP2Q9H5N1 569 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 KIAA1468Q9P260 1216 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 ELP1O95163 1332 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 PPLO60437 1756 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 SPDYE3A6NKU9 549 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 PP2D1A8MPX8 630 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 TMCO5BA8MYB1 307 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 HSPA1LP34931 641 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 MCM6Q14566 821 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 HSP90B2PQ58FF3 399 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 SCLT1Q96NL6 688 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 CLEC11AQ9Y240 323 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 RIMS1Q86UR5 1692 aaKnown RBP12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 RTL9Q8NET4 1388 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 TECPR2O15040 1411 aa12.2□□□□□ -0.46
TGFBR1-209ENST00000552516 KIF5CO60282 957 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 EVX2Q03828 476 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 LLGL1Q15334 1064 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 LRRC41Q15345 812 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 NSMFQ6X4W1 530 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 DPH6Q7L8W6 267 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 SYMPKQ92797 1274 aaKnown RBP12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 CDCA7Q9BWT1 371 aaPredicted RBP12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 GINS2Q9Y248 185 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 RESTQ13127 1097 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 UBE3CQ15386 1083 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 UVSSAQ2YD98 709 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 RILPL1Q5EBL4 403 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 KIF23Q02241 960 aaPredicted RBP12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 JDP2Q8WYK2 163 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 LLPHQ9BRT6 129 aaKnown RBP12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 CIAO1O76071 339 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 NAA30Q147X3 362 aaPredicted RBP12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 ZMYM6O95789 1325 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 LAMC1P11047 1609 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 ARHGEF28Q8N1W1 1705 aaKnown RBP12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 SPA17Q15506 151 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 IQUBQ8NA54 791 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 SIGLEC1Q9BZZ2 1709 aa12.19□□□□□ -0.46
TGFBR1-209ENST00000552516 ZNF569Q5MCW4 686 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 KDM4FA0A1W2PPD8 638 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 SH2B2O14492 632 aaPredicted RBP12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 SLC4A9Q96Q91 983 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 PIGSQ96S52 555 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 SLC39A2Q9NP94 309 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 CPDO75976 1380 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 GSG1L2A8MUP6 293 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 KRT79Q5XKE5 535 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 ANKRD13CQ8N6S4 541 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 IGSF22Q8N9C0 903 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 FAM84BQ96KN1 310 aaPredicted RBP12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 NLRC4Q9NPP4 1024 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 FAM207AQ9NSI2 230 aaPredicted RBP12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 RTEL1Q9NZ71 1219 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 THRAP3Q9Y2W1 955 aaKnown RBP12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 CEMIPQ8WUJ3 1361 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 TRAF5O00463 557 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 MEIS1O00470 390 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 GJC1P36383 396 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 USP49Q70CQ1 688 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 STAG2Q8N3U4 1231 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 SNX29Q8TEQ0 813 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 SRRTQ9BXP5 876 aaKnown RBP12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 RAB34Q9BZG1 259 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 COL15A1P39059 1388 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 RAPGEF1Q13905 1077 aa12.18□□□□□ -0.46
TGFBR1-209ENST00000552516 EN1Q05925 392 aaPredicted RBP12.17□□□□□ -0.46
TGFBR1-209ENST00000552516 ADALQ6DHV7 355 aa12.17□□□□□ -0.46
TGFBR1-209ENST00000552516 YEATS4O95619 227 aa12.17□□□□□ -0.46
TGFBR1-209ENST00000552516 CCDC148Q8NFR7 591 aa12.17□□□□□ -0.46
TGFBR1-209ENST00000552516 TMEM110-MUSTN1A8MSY1 372 aa12.17□□□□□ -0.46
TGFBR1-209ENST00000552516 HOXA13P31271 388 aaPredicted RBP12.17□□□□□ -0.46
TGFBR1-209ENST00000552516 DNAJC21Q5F1R6 531 aaKnown RBP12.17□□□□□ -0.46
TGFBR1-209ENST00000552516 PRAMEF18Q5VWM3 479 aa12.17□□□□□ -0.46
TGFBR1-209ENST00000552516 CACTINQ8WUQ7 758 aaKnown RBP12.17□□□□□ -0.46
TGFBR1-209ENST00000552516 SH2D3AQ9BRG2 576 aa12.17□□□□□ -0.46
TGFBR1-209ENST00000552516 SAMSN1Q9NSI8 373 aaKnown RBP12.17□□□□□ -0.46
TGFBR1-209ENST00000552516 MRPS25P82663 173 aaKnown RBP12.17□□□□□ -0.46
TGFBR1-209ENST00000552516 LINC00301Q8NCQ3 95 aa12.17□□□□□ -0.46
TGFBR1-209ENST00000552516 PRR16Q569H4 304 aa12.16□□□□□ -0.46
TGFBR1-209ENST00000552516 SLF1Q9BQI6 1058 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms