RNA–Protein interactions for RNA: ENST00000552442.1

UBE2N-206, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 5 BASIC

Gene UBE2N, Length 607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-206ENST00000552442 ZKSCAN4Q969J2 545 aaPredicted RBP11.03□□□□□ -0.64
UBE2N-206ENST00000552442 BCL11AQ9H165 835 aa11.03□□□□□ -0.64
UBE2N-206ENST00000552442 DDX4Q9NQI0 724 aaKnown RBP11.03□□□□□ -0.64
UBE2N-206ENST00000552442 COL2A1P02458 1487 aaPredicted RBP11.03□□□□□ -0.64
UBE2N-206ENST00000552442 ATRNL1Q5VV63 1379 aa11.03□□□□□ -0.64
UBE2N-206ENST00000552442 IGF2BP3O00425 579 aaKnown RBP eCLIP11.02□□□□□ -0.65
UBE2N-206ENST00000552442 KDM4AO75164 1064 aa11.02□□□□□ -0.65
UBE2N-206ENST00000552442 IDH1O75874 414 aaKnown RBP11.02□□□□□ -0.65
UBE2N-206ENST00000552442 BAG3O95817 575 aa11.02□□□□□ -0.65
UBE2N-206ENST00000552442 IFIT2P09913 472 aaKnown RBP11.02□□□□□ -0.65
UBE2N-206ENST00000552442 INPP5BP32019 993 aa11.02□□□□□ -0.65
UBE2N-206ENST00000552442 USP46P62068 366 aa11.02□□□□□ -0.65
UBE2N-206ENST00000552442 OTUD7BQ6GQQ9 843 aa11.02□□□□□ -0.65
UBE2N-206ENST00000552442 ERO1BQ86YB8 467 aa11.02□□□□□ -0.65
UBE2N-206ENST00000552442 TEX11Q8IYF3 940 aa11.02□□□□□ -0.65
UBE2N-206ENST00000552442 DDRGK1Q96HY6 314 aa11.02□□□□□ -0.65
UBE2N-206ENST00000552442 AATFQ9NY61 560 aaKnown RBP eCLIP11.02□□□□□ -0.65
UBE2N-206ENST00000552442 NDUFB9Q9Y6M9 179 aa11.02□□□□□ -0.65
UBE2N-206ENST00000552442 CCL15-CCL14A0A0B4J2E2 113 aa11.01□□□□□ -0.65
UBE2N-206ENST00000552442 DDTLA6NHG4 134 aaPredicted RBP11.01□□□□□ -0.65
UBE2N-206ENST00000552442 GTF2A2P52657 109 aa11.01□□□□□ -0.65
UBE2N-206ENST00000552442 FUT2Q10981 343 aa11.01□□□□□ -0.65
UBE2N-206ENST00000552442 PPIL2Q13356 520 aa11.01□□□□□ -0.65
UBE2N-206ENST00000552442 DGKZQ13574 1117 aa11.01□□□□□ -0.65
UBE2N-206ENST00000552442 CCL15Q16663 113 aa11.01□□□□□ -0.65
UBE2N-206ENST00000552442 SH3BP5LQ7L8J4 393 aa11.01□□□□□ -0.65
UBE2N-206ENST00000552442 SH3RF3Q8TEJ3 882 aaPredicted RBP11.01□□□□□ -0.65
UBE2N-206ENST00000552442 ABHD8Q96I13 439 aa11.01□□□□□ -0.65
UBE2N-206ENST00000552442 CFHR5Q9BXR6 569 aa11.01□□□□□ -0.65
UBE2N-206ENST00000552442 ZNF112Q9UJU3 913 aa11.01□□□□□ -0.65
UBE2N-206ENST00000552442 BAZ2AQ9UIF9 1905 aaKnown RBP11.01□□□□□ -0.65
UBE2N-206ENST00000552442 DDX60LQ5H9U9 1706 aaKnown RBP11.01□□□□□ -0.65
UBE2N-206ENST00000552442 GPR25O00155 361 aa11□□□□□ -0.65
UBE2N-206ENST00000552442 CYP7A1P22680 504 aa11□□□□□ -0.65
UBE2N-206ENST00000552442 PPATQ06203 517 aa11□□□□□ -0.65
UBE2N-206ENST00000552442 MAP3K12Q12852 859 aa11□□□□□ -0.65
UBE2N-206ENST00000552442 NOM1Q5C9Z4 860 aaKnown RBP11□□□□□ -0.65
UBE2N-206ENST00000552442 NOL9Q5SY16 702 aaKnown RBP11□□□□□ -0.65
UBE2N-206ENST00000552442 ADGRA1Q86SQ6 560 aa11□□□□□ -0.65
UBE2N-206ENST00000552442 MAGEB6Q8N7X4 407 aa11□□□□□ -0.65
UBE2N-206ENST00000552442 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11□□□□□ -0.65
UBE2N-206ENST00000552442 ZNF296Q8WUU4 475 aaPredicted RBP11□□□□□ -0.65
UBE2N-206ENST00000552442 BRI3BPQ8WY22 251 aa11□□□□□ -0.65
UBE2N-206ENST00000552442 LRRCC1Q9C099 1032 aa11□□□□□ -0.65
UBE2N-206ENST00000552442 MCOLN1Q9GZU1 580 aa11□□□□□ -0.65
UBE2N-206ENST00000552442 OSBPL5Q9H0X9 879 aaPredicted RBP11□□□□□ -0.65
UBE2N-206ENST00000552442 ANTXR1Q9H6X2 564 aa11□□□□□ -0.65
UBE2N-206ENST00000552442 MGAMO43451 1857 aa11□□□□□ -0.65
UBE2N-206ENST00000552442 PHF20L1A8MW92 1017 aa10.99□□□□□ -0.65
UBE2N-206ENST00000552442 CETPP11597 493 aa10.99□□□□□ -0.65
UBE2N-206ENST00000552442 SNAPC2Q13487 334 aa10.99□□□□□ -0.65
UBE2N-206ENST00000552442 TTF1Q15361 905 aaPredicted RBP10.99□□□□□ -0.65
UBE2N-206ENST00000552442 CTU1Q7Z7A3 348 aaKnown RBP10.99□□□□□ -0.65
UBE2N-206ENST00000552442 DNAJC2Q99543 621 aaKnown RBP10.99□□□□□ -0.65
UBE2N-206ENST00000552442 PTPN18Q99952 460 aa10.99□□□□□ -0.65
UBE2N-206ENST00000552442 R3HDMLQ9H3Y0 253 aa10.99□□□□□ -0.65
UBE2N-206ENST00000552442 LOC285556D6RIA3 1793 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 ZSWIM8A7E2V4 1837 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 GOLIM4O00461 696 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 SMARCA5O60264 1052 aaPredicted RBP10.98□□□□□ -0.65
UBE2N-206ENST00000552442 FKTNO75072 461 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 SLURP2P0DP57 97 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 DYNLL1P63167 89 aaKnown RBP10.98□□□□□ -0.65
UBE2N-206ENST00000552442 MAP3K10Q02779 954 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 CRHR2Q13324 411 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 TAF1CQ15572 869 aaPredicted RBP10.98□□□□□ -0.65
UBE2N-206ENST00000552442 TMED8Q6PL24 325 aaPredicted RBP10.98□□□□□ -0.65
UBE2N-206ENST00000552442 BLOC1S3Q6QNY0 202 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 CERS3Q8IU89 383 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 MAPKAPK5Q8IW41 473 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 SCYL3Q8IZE3 742 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 MIGA1Q8NAN2 632 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 TGFBRAP1Q8WUH2 860 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 CRBNQ96SW2 442 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 MTRQ99707 1265 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 DCTPP1Q9H773 170 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 PICK1Q9NRD5 415 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 FLT1P17948 1338 aa10.98□□□□□ -0.65
UBE2N-206ENST00000552442 FAM196BA6NMK8 535 aa10.97□□□□□ -0.65
UBE2N-206ENST00000552442 HOXA2O43364 376 aa10.97□□□□□ -0.65
UBE2N-206ENST00000552442 ATP5JP18859 108 aa10.97□□□□□ -0.65
UBE2N-206ENST00000552442 COPS2P61201 443 aa10.97□□□□□ -0.65
UBE2N-206ENST00000552442 FAM43AQ8N2R8 423 aa10.97□□□□□ -0.65
UBE2N-206ENST00000552442 SPIRE2Q8WWL2 714 aa10.97□□□□□ -0.65
UBE2N-206ENST00000552442 FAM117AQ9C073 453 aa10.97□□□□□ -0.65
UBE2N-206ENST00000552442 DHX36Q9H2U1 1008 aaKnown RBP10.97□□□□□ -0.65
UBE2N-206ENST00000552442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.97□□□□□ -0.65
UBE2N-206ENST00000552442 IL21Q9HBE4 155 aa10.97□□□□□ -0.65
UBE2N-206ENST00000552442 PAG1Q9NWQ8 432 aa10.97□□□□□ -0.65
UBE2N-206ENST00000552442 KCNH4Q9UQ05 1017 aa10.97□□□□□ -0.65
UBE2N-206ENST00000552442 PCDHB15Q9Y5E8 787 aa10.97□□□□□ -0.65
UBE2N-206ENST00000552442 BTBD19C9JJ37 291 aa10.96□□□□□ -0.65
UBE2N-206ENST00000552442 CTNND1O60716 968 aaKnown RBP10.96□□□□□ -0.65
UBE2N-206ENST00000552442 NR1I2O75469 434 aa10.96□□□□□ -0.65
UBE2N-206ENST00000552442 PDE6AP16499 860 aa10.96□□□□□ -0.65
UBE2N-206ENST00000552442 USP5P45974 858 aa10.96□□□□□ -0.65
UBE2N-206ENST00000552442 PUS10Q3MIT2 529 aaKnown RBP10.96□□□□□ -0.65
UBE2N-206ENST00000552442 SLC9C2Q5TAH2 1124 aa10.96□□□□□ -0.65
UBE2N-206ENST00000552442 EDC3Q96F86 508 aaKnown RBP10.96□□□□□ -0.65
UBE2N-206ENST00000552442 HAUS7Q99871 368 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms