RNA–Protein interactions for RNA: ENST00000552259.5

CPNE8-209, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-209ENST00000552259 RNF141Q8WVD5 230 aa5.68□□□□□ -1.5
CPNE8-209ENST00000552259 REV1Q9UBZ9 1251 aa5.68□□□□□ -1.5
CPNE8-209ENST00000552259 U3KQE9 123 aa5.68□□□□□ -1.5
CPNE8-209ENST00000552259 RBM47A0AV96 593 aaKnown RBP5.67□□□□□ -1.5
CPNE8-209ENST00000552259 HTR3BO95264 441 aa5.67□□□□□ -1.5
CPNE8-209ENST00000552259 CBX7O95931 251 aa5.67□□□□□ -1.5
CPNE8-209ENST00000552259 GARTP22102 1010 aa5.67□□□□□ -1.5
CPNE8-209ENST00000552259 ZNF76P36508 570 aa5.67□□□□□ -1.5
CPNE8-209ENST00000552259 TNNI2P48788 182 aa5.67□□□□□ -1.5
CPNE8-209ENST00000552259 FAM160A1Q05DH4 1040 aa5.67□□□□□ -1.5
CPNE8-209ENST00000552259 LRRFIP1Q32MZ4 808 aaKnown RBP5.67□□□□□ -1.5
CPNE8-209ENST00000552259 CDH24Q86UP0 819 aa5.67□□□□□ -1.5
CPNE8-209ENST00000552259 TMEM87AQ8NBN3 555 aa5.67□□□□□ -1.5
CPNE8-209ENST00000552259 FLAD1Q8NFF5 587 aa5.67□□□□□ -1.5
CPNE8-209ENST00000552259 DNAJB8Q8NHS0 232 aa5.67□□□□□ -1.5
CPNE8-209ENST00000552259 CCDC74BQ96LY2 380 aa5.67□□□□□ -1.5
CPNE8-209ENST00000552259 HSPA12BQ96MM6 686 aa5.67□□□□□ -1.5
CPNE8-209ENST00000552259 ASPNQ9BXN1 380 aa5.67□□□□□ -1.5
CPNE8-209ENST00000552259 SEMA3GQ9NS98 782 aa5.67□□□□□ -1.5
CPNE8-209ENST00000552259 ST14Q9Y5Y6 855 aa5.67□□□□□ -1.5
CPNE8-209ENST00000552259 GREM1O60565 184 aa5.66□□□□□ -1.5
CPNE8-209ENST00000552259 ATE1O95260 518 aa5.66□□□□□ -1.5
CPNE8-209ENST00000552259 RNASE1P07998 156 aaKnown RBP5.66□□□□□ -1.5
CPNE8-209ENST00000552259 VAMP1P23763 118 aa5.66□□□□□ -1.5
CPNE8-209ENST00000552259 RNF4P78317 190 aa5.66□□□□□ -1.5
CPNE8-209ENST00000552259 RAD51AP2Q09MP3 1159 aa5.66□□□□□ -1.5
CPNE8-209ENST00000552259 CDKAL1Q5VV42 579 aa5.66□□□□□ -1.5
CPNE8-209ENST00000552259 REXO1Q8N1G1 1221 aaKnown RBP5.66□□□□□ -1.5
CPNE8-209ENST00000552259 DPH2Q9BQC3 489 aaPredicted RBP5.66□□□□□ -1.5
CPNE8-209ENST00000552259 MBNL3Q9NUK0 354 aaKnown RBP5.66□□□□□ -1.5
CPNE8-209ENST00000552259 GPATCH2Q9NW75 528 aa5.66□□□□□ -1.5
CPNE8-209ENST00000552259 CORINQ9Y5Q5 1042 aa5.66□□□□□ -1.5
CPNE8-209ENST00000552259 F6X3S4 739 aa5.65□□□□□ -1.5
CPNE8-209ENST00000552259 H3BS24 57 aa5.65□□□□□ -1.5
CPNE8-209ENST00000552259 CCNFP41002 786 aa5.65□□□□□ -1.5
CPNE8-209ENST00000552259 AFMP43652 599 aa5.65□□□□□ -1.5
CPNE8-209ENST00000552259 ZNF165P49910 485 aa5.65□□□□□ -1.5
CPNE8-209ENST00000552259 TNK2Q07912 1038 aa5.65□□□□□ -1.5
CPNE8-209ENST00000552259 APOBRQ0VD83 1088 aa5.65□□□□□ -1.5
CPNE8-209ENST00000552259 FBXL19Q6PCT2 694 aa5.65□□□□□ -1.5
CPNE8-209ENST00000552259 PHACTR4Q8IZ21 702 aa5.65□□□□□ -1.5
CPNE8-209ENST00000552259 RIN3Q8TB24 985 aa5.65□□□□□ -1.5
CPNE8-209ENST00000552259 ZNF296Q8WUU4 475 aaPredicted RBP5.65□□□□□ -1.5
CPNE8-209ENST00000552259 SYTL4Q96C24 671 aaPredicted RBP5.65□□□□□ -1.5
CPNE8-209ENST00000552259 NT5C1AQ9BXI3 368 aa5.65□□□□□ -1.5
CPNE8-209ENST00000552259 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.65□□□□□ -1.5
CPNE8-209ENST00000552259 GMIPQ9P107 970 aa5.65□□□□□ -1.5
CPNE8-209ENST00000552259 KLHL3Q9UH77 587 aa5.65□□□□□ -1.5
CPNE8-209ENST00000552259 PRR33A8MZF0 331 aa5.64□□□□□ -1.51
CPNE8-209ENST00000552259 PAPLNO95428 1278 aa5.64□□□□□ -1.51
CPNE8-209ENST00000552259 IMPDH2P12268 514 aa5.64□□□□□ -1.51
CPNE8-209ENST00000552259 RAG1P15918 1043 aa5.64□□□□□ -1.51
CPNE8-209ENST00000552259 KIAA0825Q8IV33 1275 aa5.64□□□□□ -1.51
CPNE8-209ENST00000552259 LRRN4CLQ8ND94 238 aa5.64□□□□□ -1.51
CPNE8-209ENST00000552259 GPR62Q9BZJ7 368 aa5.64□□□□□ -1.51
CPNE8-209ENST00000552259 ASCC2Q9H1I8 757 aaPredicted RBP5.64□□□□□ -1.51
CPNE8-209ENST00000552259 FAM53CQ9NYF3 392 aa5.64□□□□□ -1.51
CPNE8-209ENST00000552259 POLR3KQ9Y2Y1 108 aaPredicted RBP5.64□□□□□ -1.51
CPNE8-209ENST00000552259 RGS13O14921 159 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 GRIN3BO60391 1043 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 RAC2P15153 192 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 GBP1P32455 592 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 CD96P40200 585 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 ENOX1Q8TC92 643 aaKnown RBP5.63□□□□□ -1.51
CPNE8-209ENST00000552259 PPP1R13LQ8WUF5 828 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 TMEM40Q8WWA1 233 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 UBE2FQ969M7 185 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 SPATA32Q96LK8 384 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 SPON2Q9BUD6 331 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 EHMT1Q9H9B1 1298 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 CARS2Q9HA77 564 aaKnown RBP5.63□□□□□ -1.51
CPNE8-209ENST00000552259 ATP13A1Q9HD20 1204 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 COPRSQ9NQ92 184 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 ZSWIM5Q9P217 1185 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 ADAMTS6Q9UKP5 1117 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 PCDHB14Q9Y5E9 798 aa5.63□□□□□ -1.51
CPNE8-209ENST00000552259 SCAMP3O14828 347 aaKnown RBP5.62□□□□□ -1.51
CPNE8-209ENST00000552259 TLR3O15455 904 aaKnown RBP5.62□□□□□ -1.51
CPNE8-209ENST00000552259 GDNFP39905 211 aa5.62□□□□□ -1.51
CPNE8-209ENST00000552259 USP48Q86UV5 1035 aa5.62□□□□□ -1.51
CPNE8-209ENST00000552259 SLITRK4Q8IW52 837 aa5.62□□□□□ -1.51
CPNE8-209ENST00000552259 DTWD2Q8NBA8 298 aa5.62□□□□□ -1.51
CPNE8-209ENST00000552259 FAM168AQ92567 244 aa5.62□□□□□ -1.51
CPNE8-209ENST00000552259 NKD1Q969G9 470 aa5.62□□□□□ -1.51
CPNE8-209ENST00000552259 RNF34Q969K3 372 aa5.62□□□□□ -1.51
CPNE8-209ENST00000552259 KREMEN1Q96MU8 473 aa5.62□□□□□ -1.51
CPNE8-209ENST00000552259 ALPK1Q96QP1 1244 aa5.62□□□□□ -1.51
CPNE8-209ENST00000552259 BRMS1Q9HCU9 246 aa5.62□□□□□ -1.51
CPNE8-209ENST00000552259 ADAMTS1Q9UHI8 967 aa5.62□□□□□ -1.51
CPNE8-209ENST00000552259 UPK3BL1B0FP48 263 aa5.61□□□□□ -1.51
CPNE8-209ENST00000552259 CHURC1-FNTBB4DL54 471 aa5.61□□□□□ -1.51
CPNE8-209ENST00000552259 UPK3BL2E5RIL1 263 aa5.61□□□□□ -1.51
CPNE8-209ENST00000552259 SRFP11831 508 aa5.61□□□□□ -1.51
CPNE8-209ENST00000552259 YBX3P16989 372 aaKnown RBP eCLIP5.61□□□□□ -1.51
CPNE8-209ENST00000552259 TPP2P29144 1249 aaPredicted RBP5.61□□□□□ -1.51
CPNE8-209ENST00000552259 SEZ6Q53EL9 994 aa5.61□□□□□ -1.51
CPNE8-209ENST00000552259 CDCP2Q5VXM1 449 aa5.61□□□□□ -1.51
CPNE8-209ENST00000552259 TSPYL5Q86VY4 417 aaPredicted RBP5.61□□□□□ -1.51
CPNE8-209ENST00000552259 ZSWIM9Q86XI8 627 aa5.61□□□□□ -1.51
CPNE8-209ENST00000552259 POU5F2Q8N7G0 328 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms