RNA–Protein interactions for RNA: ENST00000552197.5

SLC38A1-210, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC38A1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-210ENST00000552197 ALG1Q9BT22 464 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 TRIM34Q9BYJ4 488 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 TCP11L1Q9NUJ3 509 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 hCG_1642624A0A1W2PR95 340 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 DDAH1O94760 285 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 PLEKHA8P1O95397 391 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 CALM1P0DP23 149 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 CALM2P0DP24 149 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 CALM3P0DP25 149 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 GUCY1A2P33402 732 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 GMPSP49915 693 aaPredicted RBP12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 RCAN1P53805 252 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 CLEC10AQ8IUN9 316 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 CTCFLQ8NI51 663 aaPredicted RBP12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 TMEM47Q9BQJ4 181 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 DNAJC18Q9H819 358 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 MYOZ2Q9NPC6 264 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 SWAP70Q9UH65 585 aa12.85□□□□□ -0.35
SLC38A1-210ENST00000552197 FZD9O00144 591 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 WNT10BO00744 389 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 FMNL1O95466 1100 aaPredicted RBP12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 EGFRP00533 1210 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 NT5C2P49902 561 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 CCDC178Q5BJE1 867 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 TRIM22Q8IYM9 498 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 CSRNP1Q96S65 589 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 LMBRD1Q9NUN5 540 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 NID2Q14112 1375 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 ZNF541Q9H0D2 1346 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 FIBPO43427 364 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 MYO1BO43795 1136 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 ENTPD3O75355 529 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 NBPF11Q86T75 865 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 MYH6P13533 1939 aa12.84□□□□□ -0.35
SLC38A1-210ENST00000552197 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.35
SLC38A1-210ENST00000552197 PPP2R5BQ15173 497 aa12.83□□□□□ -0.35
SLC38A1-210ENST00000552197 SHROOM1Q2M3G4 852 aaPredicted RBP12.83□□□□□ -0.35
SLC38A1-210ENST00000552197 RASGRP2Q7LDG7 609 aa12.83□□□□□ -0.35
SLC38A1-210ENST00000552197 SAMD7Q7Z3H4 446 aa12.83□□□□□ -0.35
SLC38A1-210ENST00000552197 MICALL2Q8IY33 904 aa12.83□□□□□ -0.35
SLC38A1-210ENST00000552197 FBXO18Q8NFZ0 1043 aa12.83□□□□□ -0.35
SLC38A1-210ENST00000552197 PIBF1Q8WXW3 757 aa12.83□□□□□ -0.35
SLC38A1-210ENST00000552197 ANKS1AQ92625 1134 aa12.83□□□□□ -0.35
SLC38A1-210ENST00000552197 GZF1Q9H116 711 aaPredicted RBP12.83□□□□□ -0.35
SLC38A1-210ENST00000552197 EHD4Q9H223 541 aa12.83□□□□□ -0.35
SLC38A1-210ENST00000552197 RBM28Q9NW13 759 aaKnown RBP12.83□□□□□ -0.35
SLC38A1-210ENST00000552197 SIPA1L1O43166 1804 aa12.83□□□□□ -0.35
SLC38A1-210ENST00000552197 RESTQ13127 1097 aa12.83□□□□□ -0.36
SLC38A1-210ENST00000552197 TBC1D10BQ4KMP7 808 aaPredicted RBP12.83□□□□□ -0.36
SLC38A1-210ENST00000552197 USP48Q86UV5 1035 aa12.83□□□□□ -0.36
SLC38A1-210ENST00000552197 TFIP11Q9UBB9 837 aaKnown RBP12.83□□□□□ -0.36
SLC38A1-210ENST00000552197 CNOT7Q9UIV1 285 aaKnown RBP12.83□□□□□ -0.36
SLC38A1-210ENST00000552197 V9GY48 417 aaPredicted RBP12.83□□□□□ -0.36
SLC38A1-210ENST00000552197 LMNB1P20700 586 aa12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 ATP2B2Q01814 1243 aa12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 AKAP17AQ02040 695 aaKnown RBP12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 CERKLQ49MI3 558 aaPredicted RBP12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 FOXP4Q8IVH2 680 aaPredicted RBP12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 CDAN1Q8IWY9 1227 aa12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 STAG2Q8N3U4 1231 aa12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 SRBD1Q8N5C6 995 aaKnown RBP12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 MTMR14Q8NCE2 650 aa12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 TMEM39BQ9GZU3 492 aa12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 MTMR4Q9NYA4 1195 aa12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 DDX49Q9Y6V7 483 aaKnown RBP12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 GOLGA8HP0CJ92 632 aa12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 RPS12P25398 132 aaKnown RBP12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 TMTC3Q6ZXV5 915 aa12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 LRRC47Q8N1G4 583 aaKnown RBP12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 CLIP2Q9UDT6 1046 aa12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 STK36Q9NRP7 1315 aa12.82□□□□□ -0.36
SLC38A1-210ENST00000552197 GDF11O95390 407 aa12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 YBX3P16989 372 aaKnown RBP eCLIP12.81□□□□□ -0.366e-8■■□□□ 11.4
SLC38A1-210ENST00000552197 PTMSP20962 102 aa12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 TRIM29Q14134 588 aa12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 KRT40Q6A162 431 aa12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 FAM151AQ8WW52 585 aa12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 ZSCAN16Q9H4T2 348 aaPredicted RBP12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 CNTNAP1P78357 1384 aa12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 ATRNL1Q5VV63 1379 aa12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 GADD45BO75293 160 aaPredicted RBP12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 DEXIO95424 95 aa12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 TOP1P11387 765 aaKnown RBP12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 KIF5BP33176 963 aa12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 ZNF280AP59817 542 aaPredicted RBP12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 CEBPZQ03701 1054 aaKnown RBP12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 FUT2Q10981 343 aa12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 ZBED3Q96IU2 234 aaPredicted RBP12.81□□□□□ -0.36
SLC38A1-210ENST00000552197 SBF1O95248 1867 aa12.8□□□□□ -0.36
SLC38A1-210ENST00000552197 KRT85P78386 507 aa12.8□□□□□ -0.36
SLC38A1-210ENST00000552197 USP17L2Q6R6M4 530 aa12.8□□□□□ -0.36
SLC38A1-210ENST00000552197 WASF1Q92558 559 aa12.8□□□□□ -0.36
SLC38A1-210ENST00000552197 DPF2Q92785 391 aa12.8□□□□□ -0.36
SLC38A1-210ENST00000552197 RNF26Q9BY78 433 aaPredicted RBP12.8□□□□□ -0.36
SLC38A1-210ENST00000552197 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.8□□□□□ -0.36
SLC38A1-210ENST00000552197 MAD2L2Q9UI95 211 aa12.8□□□□□ -0.36
SLC38A1-210ENST00000552197 KCNJ14Q9UNX9 436 aa12.8□□□□□ -0.36
SLC38A1-210ENST00000552197 ASTN2O75129 1339 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms