RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 ZFYP08048 801 aaPredicted RBP7.09□□□□□ -1.27
CCDC65-204ENST00000552188 ASNSP08243 561 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 SLURP2P0DP57 97 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 HOXB1P14653 301 aaPredicted RBP7.09□□□□□ -1.27
CCDC65-204ENST00000552188 PTPRAP18433 802 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 CAP2P40123 477 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 SP3Q02447 781 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 MAP3K10Q02779 954 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 PABPC4Q13310 644 aaKnown RBP eCLIP7.09□□□□□ -1.27
CCDC65-204ENST00000552188 CRHR2Q13324 411 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 KIF22Q14807 665 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 UBE3CQ15386 1083 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 CTU1Q7Z7A3 348 aaKnown RBP7.09□□□□□ -1.27
CCDC65-204ENST00000552188 LCORLQ8N3X6 602 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 KBTBD3Q8NAB2 608 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 SDR42E1Q8WUS8 393 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 BRI3BPQ8WY22 251 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 ERO1AQ96HE7 468 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 RIOK1Q9BRS2 568 aaKnown RBP7.09□□□□□ -1.27
CCDC65-204ENST00000552188 LNPKQ9C0E8 428 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 MCOLN1Q9GZU1 580 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 SERPINB13Q9UIV8 391 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 SLC4A4Q9Y6R1 1079 aa7.09□□□□□ -1.27
CCDC65-204ENST00000552188 LOC285556D6RIA3 1793 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 PCNTO95613 3336 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 DDX60LQ5H9U9 1706 aaKnown RBP7.08□□□□□ -1.28
CCDC65-204ENST00000552188 MYH4Q9Y623 1939 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 TCRBV5S4A2TA0A5A2 114 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 CCDC85CA6NKD9 419 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 BTBD19C9JJ37 291 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 PDHXO00330 501 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 MPHOSPH10O00566 681 aaKnown RBP7.08□□□□□ -1.28
CCDC65-204ENST00000552188 RNF113AO15541 343 aaKnown RBP7.08□□□□□ -1.28
CCDC65-204ENST00000552188 GDF11O95390 407 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 RAB3GAP1Q15042 981 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 CERKLQ49MI3 558 aaPredicted RBP7.08□□□□□ -1.28
CCDC65-204ENST00000552188 NOM1Q5C9Z4 860 aaKnown RBP7.08□□□□□ -1.28
CCDC65-204ENST00000552188 ANKRD23Q86SG2 305 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 FAM43AQ8N2R8 423 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 ZNF280CQ8ND82 737 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 APPBP2Q92624 585 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 RILPL2Q969X0 211 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 MARVELD3Q96A59 401 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 PTPN18Q99952 460 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 CFHR5Q9BXR6 569 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 ZCCHC17Q9NP64 241 aaKnown RBP7.08□□□□□ -1.28
CCDC65-204ENST00000552188 ATP8A2Q9NTI2 1148 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 GINM1Q9NU53 330 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 TMOD4Q9NZQ9 345 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 LHX6Q9UPM6 363 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 KCNH4Q9UQ05 1017 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 AFG3L2Q9Y4W6 797 aa7.08□□□□□ -1.28
CCDC65-204ENST00000552188 MINDY4BA8MYZ0 360 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 PRKAB2O43741 272 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 IGHDP01880 384 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 GNAT2P19087 354 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 OSBPP22059 807 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 TDO2P48775 406 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 PLCD1P51178 756 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 PDE1AP54750 535 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 SPP2Q13103 211 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 PKN2Q16513 984 aaKnown RBP7.07□□□□□ -1.28
CCDC65-204ENST00000552188 ABCB5Q2M3G0 1257 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 SLFNL1Q499Z3 407 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 SMYD5Q6GMV2 418 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.07□□□□□ -1.28
CCDC65-204ENST00000552188 CCDC84Q86UT8 332 aaPredicted RBP7.07□□□□□ -1.28
CCDC65-204ENST00000552188 CHD1LQ86WJ1 897 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 CD99L2Q8TCZ2 262 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 OTUD7AQ8TE49 926 aaPredicted RBP7.07□□□□□ -1.28
CCDC65-204ENST00000552188 SMCR8Q8TEV9 937 aaPredicted RBP7.07□□□□□ -1.28
CCDC65-204ENST00000552188 ABHD8Q96I13 439 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 PARK7Q99497 189 aaKnown RBP7.07□□□□□ -1.28
CCDC65-204ENST00000552188 FEZ1Q99689 392 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 NACAP1Q9BZK3 213 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 PUS7LQ9H0K6 701 aaKnown RBP7.07□□□□□ -1.28
CCDC65-204ENST00000552188 EHD4Q9H223 541 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 R3HDMLQ9H3Y0 253 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 EFCC1Q9HA90 598 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 DCP1AQ9NPI6 582 aaPredicted RBP7.07□□□□□ -1.28
CCDC65-204ENST00000552188 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.07□□□□□ -1.28
CCDC65-204ENST00000552188 SWAP70Q9UH65 585 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 PNMA3Q9UL41 463 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 ZBTB21Q9ULJ3 1066 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 TRIM17Q9Y577 477 aa7.07□□□□□ -1.28
CCDC65-204ENST00000552188 ZSWIM8A7E2V4 1837 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 A0A0G2JLL6 359 aaPredicted RBP7.06□□□□□ -1.28
CCDC65-204ENST00000552188 C19orf81C9J6K1 198 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 USP17L10C9JJH3 530 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 USP17L12C9JPN9 530 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 USP17L21D6R901 530 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 GPAA1O43292 621 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 TLR2O60603 784 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 GH2P01242 217 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 HMGCS2P54868 508 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 PRRT2Q7Z6L0 340 aaPredicted RBP7.06□□□□□ -1.28
CCDC65-204ENST00000552188 SMC5Q8IY18 1101 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 STK11IPQ8N1F8 1099 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 ZNF454Q8N9F8 522 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 PROCA1Q8NCQ7 364 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms