RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 CLUAP1Q96AJ1 413 aa17.33■□□□□ 0.36
CHMP1A-210ENST00000551981 EDC3Q96F86 508 aaKnown RBP17.33■□□□□ 0.36
CHMP1A-210ENST00000551981 C12orf42Q96LP6 360 aa17.33■□□□□ 0.36
CHMP1A-210ENST00000551981 SURF6O75683 361 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-210ENST00000551981 CYP7A1P22680 504 aa17.32■□□□□ 0.36
CHMP1A-210ENST00000551981 USP5P45974 858 aa17.32■□□□□ 0.36
CHMP1A-210ENST00000551981 DYNLL1P63167 89 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-210ENST00000551981 ZYXQ15942 572 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-210ENST00000551981 LRRC26Q2I0M4 334 aa17.32■□□□□ 0.36
CHMP1A-210ENST00000551981 WDR78Q5VTH9 848 aa17.32■□□□□ 0.36
CHMP1A-210ENST00000551981 TATDN1Q6P1N9 297 aa17.32■□□□□ 0.36
CHMP1A-210ENST00000551981 PIH1D3Q9NQM4 214 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-210ENST00000551981 MTMR10Q9NXD2 777 aa17.32■□□□□ 0.36
CHMP1A-210ENST00000551981 SERPINB13Q9UIV8 391 aa17.32■□□□□ 0.36
CHMP1A-210ENST00000551981 SLC15A5A6NIM6 579 aa17.31■□□□□ 0.36
CHMP1A-210ENST00000551981 MSCO60682 206 aa17.31■□□□□ 0.36
CHMP1A-210ENST00000551981 IDH1O75874 414 aaKnown RBP17.31■□□□□ 0.36
CHMP1A-210ENST00000551981 RAB3GAP1Q15042 981 aa17.31■□□□□ 0.36
CHMP1A-210ENST00000551981 SSH3Q8TE77 659 aa17.31■□□□□ 0.36
CHMP1A-210ENST00000551981 EHD4Q9H223 541 aa17.31■□□□□ 0.36
CHMP1A-210ENST00000551981 IVNS1ABPQ9Y6Y0 642 aa17.31■□□□□ 0.36
CHMP1A-210ENST00000551981 UNC80Q8N2C7 3258 aa17.31■□□□□ 0.36
CHMP1A-210ENST00000551981 BCAR3O75815 825 aa17.3■□□□□ 0.36
CHMP1A-210ENST00000551981 ATP8B2P98198 1209 aa17.3■□□□□ 0.36
CHMP1A-210ENST00000551981 MDM2Q00987 491 aaPredicted RBP17.3■□□□□ 0.36
CHMP1A-210ENST00000551981 ATP2B2Q01814 1243 aa17.3■□□□□ 0.36
CHMP1A-210ENST00000551981 TMED8Q6PL24 325 aaPredicted RBP17.3■□□□□ 0.36
CHMP1A-210ENST00000551981 POTEEQ6S8J3 1075 aa17.3■□□□□ 0.36
CHMP1A-210ENST00000551981 CATSPERGQ6ZRH7 1159 aa17.3■□□□□ 0.36
CHMP1A-210ENST00000551981 TTC6Q86TZ1 520 aa17.3■□□□□ 0.36
CHMP1A-210ENST00000551981 MIGA1Q8NAN2 632 aa17.3■□□□□ 0.36
CHMP1A-210ENST00000551981 LBHD1Q9BQE6 289 aaPredicted RBP17.3■□□□□ 0.36
CHMP1A-210ENST00000551981 KIAA1683Q9H0B3 1180 aa17.3■□□□□ 0.36
CHMP1A-210ENST00000551981 TNNQ9UQP3 1299 aa17.3■□□□□ 0.36
CHMP1A-210ENST00000551981 LAMA2P24043 3122 aaKnown RBP17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 CNMDO75829 334 aa17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 VCAM1P19320 739 aa17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 PTPREP23469 700 aa17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 CNGA1P29973 690 aa17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 ABCB5Q2M3G0 1257 aa17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 CERKLQ49MI3 558 aaPredicted RBP17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 ZKSCAN2Q63HK3 967 aa17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 LBX2Q6XYB7 198 aa17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 TMEM57Q8N5G2 664 aa17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 SENP6Q9GZR1 1112 aaPredicted RBP17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 CABP5Q9NP86 173 aa17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 PRKAG2Q9UGJ0 569 aa17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 DDX20Q9UHI6 824 aaKnown RBP17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 DBNLQ9UJU6 430 aaKnown RBP17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 NDUFB9Q9Y6M9 179 aa17.29■□□□□ 0.36
CHMP1A-210ENST00000551981 HOXC6P09630 235 aa17.28■□□□□ 0.36
CHMP1A-210ENST00000551981 MAP3K12Q12852 859 aa17.28■□□□□ 0.36
CHMP1A-210ENST00000551981 MAGEB6Q8N7X4 407 aa17.28■□□□□ 0.36
CHMP1A-210ENST00000551981 LPAR1Q92633 364 aa17.28■□□□□ 0.36
CHMP1A-210ENST00000551981 FLRT1Q9NZU1 646 aa17.28■□□□□ 0.36
CHMP1A-210ENST00000551981 GRB14Q14449 540 aa17.27■□□□□ 0.36
CHMP1A-210ENST00000551981 CCDC8Q9H0W5 538 aaPredicted RBP17.27■□□□□ 0.36
CHMP1A-210ENST00000551981 TLR7Q9NYK1 1049 aaKnown RBP17.27■□□□□ 0.36
CHMP1A-210ENST00000551981 NOP58Q9Y2X3 529 aaKnown RBP17.27■□□□□ 0.36
CHMP1A-210ENST00000551981 DNM1LO00429 736 aa17.26■□□□□ 0.35
CHMP1A-210ENST00000551981 FAM109BQ6ICB4 259 aaPredicted RBP17.26■□□□□ 0.35
CHMP1A-210ENST00000551981 ACER1Q8TDN7 264 aa17.26■□□□□ 0.35
CHMP1A-210ENST00000551981 RPAP3Q9H6T3 665 aaPredicted RBP17.26■□□□□ 0.35
CHMP1A-210ENST00000551981 BTBD7Q9P203 1132 aa17.26■□□□□ 0.35
CHMP1A-210ENST00000551981 NAV1Q8NEY1 1877 aa17.25■□□□□ 0.35
CHMP1A-210ENST00000551981 SPDYE16A6NNV3 312 aaPredicted RBP17.25■□□□□ 0.35
CHMP1A-210ENST00000551981 ATN1P54259 1190 aaPredicted RBP17.25■□□□□ 0.35
CHMP1A-210ENST00000551981 DPP9Q86TI2 863 aa17.25■□□□□ 0.35
CHMP1A-210ENST00000551981 FTSJ3Q8IY81 847 aaKnown RBP17.25■□□□□ 0.35
CHMP1A-210ENST00000551981 EAF2Q96CJ1 260 aaPredicted RBP17.25■□□□□ 0.35
CHMP1A-210ENST00000551981 C1orf115Q9H7X2 142 aa17.25■□□□□ 0.35
CHMP1A-210ENST00000551981 ZNF236Q9UL36 1845 aa17.25■□□□□ 0.35
CHMP1A-210ENST00000551981 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
CHMP1A-210ENST00000551981 POLR3DP05423 398 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-210ENST00000551981 CYP2C19P33261 490 aa17.24■□□□□ 0.35
CHMP1A-210ENST00000551981 SHMT1P34896 483 aa17.24■□□□□ 0.35
CHMP1A-210ENST00000551981 ARRDC4Q8NCT1 418 aa17.24■□□□□ 0.35
CHMP1A-210ENST00000551981 HOXC10Q9NYD6 342 aa17.24■□□□□ 0.35
CHMP1A-210ENST00000551981 POTEB2H3BUK9 544 aa17.23■□□□□ 0.35
CHMP1A-210ENST00000551981 STRNO43815 780 aa17.23■□□□□ 0.35
CHMP1A-210ENST00000551981 RTP1P59025 263 aa17.23■□□□□ 0.35
CHMP1A-210ENST00000551981 COG2Q14746 738 aa17.23■□□□□ 0.35
CHMP1A-210ENST00000551981 OLFML2BQ68BL8 750 aa17.23■□□□□ 0.35
CHMP1A-210ENST00000551981 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
CHMP1A-210ENST00000551981 NPLOC4Q8TAT6 608 aa17.23■□□□□ 0.35
CHMP1A-210ENST00000551981 TANGO6Q9C0B7 1094 aa17.23■□□□□ 0.35
CHMP1A-210ENST00000551981 SLC5A4Q9NY91 659 aa17.23■□□□□ 0.35
CHMP1A-210ENST00000551981 LTBP2Q14767 1821 aa17.23■□□□□ 0.35
CHMP1A-210ENST00000551981 RLFQ13129 1914 aa17.22■□□□□ 0.35
CHMP1A-210ENST00000551981 MAGEB6P1A0A0J9YX57 407 aa17.22■□□□□ 0.35
CHMP1A-210ENST00000551981 KBTBD13C9JR72 458 aa17.22■□□□□ 0.35
CHMP1A-210ENST00000551981 MPHOSPH10O00566 681 aaKnown RBP17.22■□□□□ 0.35
CHMP1A-210ENST00000551981 CYBAP13498 195 aa17.22■□□□□ 0.35
CHMP1A-210ENST00000551981 PLCD1P51178 756 aa17.22■□□□□ 0.35
CHMP1A-210ENST00000551981 SEPT2Q15019 361 aa17.22■□□□□ 0.35
CHMP1A-210ENST00000551981 ITPRIPQ8IWB1 547 aa17.22■□□□□ 0.35
CHMP1A-210ENST00000551981 CRNKL1Q9BZJ0 848 aaKnown RBP17.22■□□□□ 0.35
CHMP1A-210ENST00000551981 ANTXR1Q9H6X2 564 aa17.22■□□□□ 0.35
CHMP1A-210ENST00000551981 ATP11BQ9Y2G3 1177 aa17.22■□□□□ 0.35
CHMP1A-210ENST00000551981 ADORA2AP29274 412 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms