RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 GPAT2Q6NUI2 795 aa18■□□□□ 0.47
SMARCD1-211ENST00000551497 CASC1Q6TDU7 716 aa18■□□□□ 0.47
SMARCD1-211ENST00000551497 PRRT2Q7Z6L0 340 aaPredicted RBP18■□□□□ 0.47
SMARCD1-211ENST00000551497 FAM43AQ8N2R8 423 aa18■□□□□ 0.47
SMARCD1-211ENST00000551497 ZNF287Q9HBT7 754 aa18■□□□□ 0.47
SMARCD1-211ENST00000551497 TSKSQ9UJT2 592 aa18■□□□□ 0.47
SMARCD1-211ENST00000551497 A0A1W2PRG0 241 aa17.99■□□□□ 0.47
SMARCD1-211ENST00000551497 HMGCS2P54868 508 aa17.99■□□□□ 0.47
SMARCD1-211ENST00000551497 RRP12Q5JTH9 1297 aaKnown RBP17.99■□□□□ 0.47
SMARCD1-211ENST00000551497 AKNAD1Q5T1N1 836 aa17.99■□□□□ 0.47
SMARCD1-211ENST00000551497 GADL1Q6ZQY3 521 aa17.99■□□□□ 0.47
SMARCD1-211ENST00000551497 BEGAINQ9BUH8 593 aa17.99■□□□□ 0.47
SMARCD1-211ENST00000551497 TBC1D2Q9BYX2 928 aa17.99■□□□□ 0.47
SMARCD1-211ENST00000551497 R3HDMLQ9H3Y0 253 aa17.99■□□□□ 0.47
SMARCD1-211ENST00000551497 U3KPZ7 1027 aaPredicted RBP17.99■□□□□ 0.47
SMARCD1-211ENST00000551497 USP17L10C9JJH3 530 aa17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 FOXN1O15353 648 aa17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 ORC4O43929 436 aa17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 RANBP6O60518 1105 aaKnown RBP17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 TBC1D8O95759 1140 aa17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 EEF2P13639 858 aaKnown RBP17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 BACE1P56817 501 aa17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 ZYXQ15942 572 aaKnown RBP17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 IMMTQ16891 758 aaKnown RBP17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 MFSD6Q6ZSS7 791 aa17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 NEDD1Q8NHV4 660 aa17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 KANSL2Q9H9L4 492 aa17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 ANO2Q9NQ90 1003 aa17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 TOMM22Q9NS69 142 aa17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 EMILIN3Q9NT22 766 aa17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 RBM8AQ9Y5S9 174 aaKnown RBP17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 TAF6LQ9Y6J9 622 aa17.98■□□□□ 0.47
SMARCD1-211ENST00000551497 IGKV6D-41A0A0C4DH26 115 aa17.97■□□□□ 0.47
SMARCD1-211ENST00000551497 CYP21A2P08686 494 aa17.97■□□□□ 0.47
SMARCD1-211ENST00000551497 ATP2B2Q01814 1243 aa17.97■□□□□ 0.47
SMARCD1-211ENST00000551497 SH3D19Q5HYK7 790 aa17.97■□□□□ 0.47
SMARCD1-211ENST00000551497 TREML2Q5T2D2 321 aa17.97■□□□□ 0.47
SMARCD1-211ENST00000551497 FASTKD5Q7L8L6 764 aaKnown RBP17.97■□□□□ 0.47
SMARCD1-211ENST00000551497 STAG1Q8WVM7 1258 aa17.97■□□□□ 0.47
SMARCD1-211ENST00000551497 C19orf81C9J6K1 198 aa17.96■□□□□ 0.47
SMARCD1-211ENST00000551497 PDHXO00330 501 aa17.96■□□□□ 0.47
SMARCD1-211ENST00000551497 NMT2O60551 498 aa17.96■□□□□ 0.47
SMARCD1-211ENST00000551497 TSPY3P0CV98 308 aa17.96■□□□□ 0.47
SMARCD1-211ENST00000551497 TSPY8P0CW00 308 aa17.96■□□□□ 0.47
SMARCD1-211ENST00000551497 ICA1Q05084 483 aa17.96■□□□□ 0.47
SMARCD1-211ENST00000551497 OTUD7BQ6GQQ9 843 aa17.96■□□□□ 0.47
SMARCD1-211ENST00000551497 ANKRD23Q86SG2 305 aa17.96■□□□□ 0.47
SMARCD1-211ENST00000551497 FEZ1Q99689 392 aa17.96■□□□□ 0.47
SMARCD1-211ENST00000551497 IL17RBQ9NRM6 502 aa17.96■□□□□ 0.47
SMARCD1-211ENST00000551497 PTPRFP10586 1907 aa17.96■□□□□ 0.47
SMARCD1-211ENST00000551497 NEDD4P46934 1319 aa17.96■□□□□ 0.46
SMARCD1-211ENST00000551497 TSPY2A6NKD2 308 aa17.95■□□□□ 0.46
SMARCD1-211ENST00000551497 KIAA1755Q5JYT7 1200 aa17.95■□□□□ 0.46
SMARCD1-211ENST00000551497 USP17L2Q6R6M4 530 aa17.95■□□□□ 0.46
SMARCD1-211ENST00000551497 CEP95Q96GE4 821 aa17.95■□□□□ 0.46
SMARCD1-211ENST00000551497 KIAA1683Q9H0B3 1180 aa17.95■□□□□ 0.46
SMARCD1-211ENST00000551497 TMOD4Q9NZQ9 345 aa17.95■□□□□ 0.46
SMARCD1-211ENST00000551497 CLIP2Q9UDT6 1046 aa17.95■□□□□ 0.46
SMARCD1-211ENST00000551497 B4E1Z4 1266 aa17.94■□□□□ 0.46
SMARCD1-211ENST00000551497 ALDH1A1P00352 501 aa17.94■□□□□ 0.46
SMARCD1-211ENST00000551497 CRHR2Q13324 411 aa17.94■□□□□ 0.46
SMARCD1-211ENST00000551497 NECTIN1Q15223 517 aa17.94■□□□□ 0.46
SMARCD1-211ENST00000551497 RNF41Q9H4P4 317 aaPredicted RBP17.94■□□□□ 0.46
SMARCD1-211ENST00000551497 ARHGEF10LQ9HCE6 1279 aa17.94■□□□□ 0.46
SMARCD1-211ENST00000551497 MTMR4Q9NYA4 1195 aa17.94■□□□□ 0.46
SMARCD1-211ENST00000551497 AGTPBP1Q9UPW5 1226 aa17.94■□□□□ 0.46
SMARCD1-211ENST00000551497 TMX2Q9Y320 296 aa17.94■□□□□ 0.46
SMARCD1-211ENST00000551497 CA12O43570 354 aa17.93■□□□□ 0.46
SMARCD1-211ENST00000551497 HSPA8P11142 646 aaKnown RBP17.93■□□□□ 0.46
SMARCD1-211ENST00000551497 PCP11498 1178 aaKnown RBP17.93■□□□□ 0.46
SMARCD1-211ENST00000551497 TAF1CQ15572 869 aaPredicted RBP17.93■□□□□ 0.46
SMARCD1-211ENST00000551497 STOX1Q6ZVD7 989 aa17.93■□□□□ 0.46
SMARCD1-211ENST00000551497 PROCA1Q8NCQ7 364 aaPredicted RBP17.93■□□□□ 0.46
SMARCD1-211ENST00000551497 SAGE1Q9NXZ1 904 aa17.93■□□□□ 0.46
SMARCD1-211ENST00000551497 ZSWIM5Q9P217 1185 aa17.93■□□□□ 0.46
SMARCD1-211ENST00000551497 NYAP2Q9P242 653 aa17.93■□□□□ 0.46
SMARCD1-211ENST00000551497 GREB1LQ9C091 1923 aaPredicted RBP17.92■□□□□ 0.46
SMARCD1-211ENST00000551497 SLC27A2O14975 620 aa17.92■□□□□ 0.46
SMARCD1-211ENST00000551497 KDM4AO75164 1064 aa17.92■□□□□ 0.46
SMARCD1-211ENST00000551497 CYP2C8P10632 490 aa17.92■□□□□ 0.46
SMARCD1-211ENST00000551497 LBX1P52954 281 aa17.92■□□□□ 0.46
SMARCD1-211ENST00000551497 CREB3L3Q68CJ9 461 aa17.92■□□□□ 0.46
SMARCD1-211ENST00000551497 SPICE1Q8N0Z3 855 aa17.92■□□□□ 0.46
SMARCD1-211ENST00000551497 ZKSCAN3Q9BRR0 538 aa17.92■□□□□ 0.46
SMARCD1-211ENST00000551497 LAMA4Q16363 1823 aa17.91■□□□□ 0.46
SMARCD1-211ENST00000551497 E7EWF7 191 aa17.91■□□□□ 0.46
SMARCD1-211ENST00000551497 CTCFP49711 727 aaPredicted RBP17.91■□□□□ 0.46
SMARCD1-211ENST00000551497 USP14P54578 494 aa17.91■□□□□ 0.46
SMARCD1-211ENST00000551497 ESR2Q92731 530 aa17.91■□□□□ 0.46
SMARCD1-211ENST00000551497 MKL1Q969V6 931 aa17.91■□□□□ 0.46
SMARCD1-211ENST00000551497 C12orf42Q96LP6 360 aa17.91■□□□□ 0.46
SMARCD1-211ENST00000551497 ZCCHC17Q9NP64 241 aaKnown RBP17.91■□□□□ 0.46
SMARCD1-211ENST00000551497 PLIN4Q96Q06 1357 aa17.91■□□□□ 0.46
SMARCD1-211ENST00000551497 TTLL1O95922 423 aa17.9■□□□□ 0.46
SMARCD1-211ENST00000551497 VCAM1P19320 739 aa17.9■□□□□ 0.46
SMARCD1-211ENST00000551497 CYB5R4Q7L1T6 521 aa17.9■□□□□ 0.46
SMARCD1-211ENST00000551497 LRRC47Q8N1G4 583 aaKnown RBP17.9■□□□□ 0.46
SMARCD1-211ENST00000551497 CHMP4CQ96CF2 233 aa17.9■□□□□ 0.46
SMARCD1-211ENST00000551497 CFHR5Q9BXR6 569 aa17.9■□□□□ 0.46
SMARCD1-211ENST00000551497 KRT23Q9C075 422 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms