RNA–Protein interactions for RNA: ENST00000551424.5

CNTN1-209, Transcript of contactin 1, human

TSL 3

Gene CNTN1, Length 555 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN1-209	ENST00000551424	USP17L20	D6RJB6	530 aa		27.76	■■■□□ 2.03
CNTN1-209	ENST00000551424	POLR3D	P05423	398 aa	Predicted RBP	27.76	■■■□□ 2.03
CNTN1-209	ENST00000551424	PLCD1	P51178	756 aa		27.76	■■■□□ 2.03
CNTN1-209	ENST00000551424	USP17L24	Q0WX57	530 aa		27.76	■■■□□ 2.03
CNTN1-209	ENST00000551424	POTEE	Q6S8J3	1075 aa		27.76	■■■□□ 2.03
CNTN1-209	ENST00000551424	PLEKHH3	Q7Z736	793 aa		27.76	■■■□□ 2.03
CNTN1-209	ENST00000551424	ACER1	Q8TDN7	264 aa		27.76	■■■□□ 2.03
CNTN1-209	ENST00000551424	C12orf42	Q96LP6	360 aa		27.76	■■■□□ 2.03
CNTN1-209	ENST00000551424	DNAJC2	Q99543	621 aa	Known RBP	27.76	■■■□□ 2.03
CNTN1-209	ENST00000551424	CABP5	Q9NP86	173 aa		27.76	■■■□□ 2.03
CNTN1-209	ENST00000551424	STAP2	Q9UGK3	403 aa		27.76	■■■□□ 2.03
CNTN1-209	ENST00000551424	ZBED9	Q6R2W3	1325 aa		27.75	■■■□□ 2.03
CNTN1-209	ENST00000551424	XRCC5	P13010	732 aa	Known RBP	27.75	■■■□□ 2.03
CNTN1-209	ENST00000551424	PDE6A	P16499	860 aa		27.75	■■■□□ 2.03
CNTN1-209	ENST00000551424	RGS2	P41220	211 aa		27.75	■■■□□ 2.03
CNTN1-209	ENST00000551424	TTF1	Q15361	905 aa	Predicted RBP	27.75	■■■□□ 2.03
CNTN1-209	ENST00000551424	CCL14	Q16627	93 aa		27.75	■■■□□ 2.03
CNTN1-209	ENST00000551424	MAP3K21	Q5TCX8	1036 aa		27.75	■■■□□ 2.03
CNTN1-209	ENST00000551424	WDR78	Q5VTH9	848 aa		27.75	■■■□□ 2.03
CNTN1-209	ENST00000551424	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	27.75	■■■□□ 2.03
CNTN1-209	ENST00000551424	SHMT1	P34896	483 aa		27.74	■■■□□ 2.03
CNTN1-209	ENST00000551424	USP14	P54578	494 aa		27.74	■■■□□ 2.03
CNTN1-209	ENST00000551424	SLC9C2	Q5TAH2	1124 aa		27.74	■■■□□ 2.03
CNTN1-209	ENST00000551424	DIEXF	Q68CQ4	756 aa	Known RBP	27.74	■■■□□ 2.03
CNTN1-209	ENST00000551424	TMED8	Q6PL24	325 aa	Predicted RBP	27.74	■■■□□ 2.03
CNTN1-209	ENST00000551424	CLASRP	Q8N2M8	674 aa	Known RBP	27.74	■■■□□ 2.03
CNTN1-209	ENST00000551424	CRNKL1	Q9BZJ0	848 aa	Known RBP	27.74	■■■□□ 2.03
CNTN1-209	ENST00000551424	C11orf49	Q9H6J7	331 aa		27.74	■■■□□ 2.03
CNTN1-209	ENST00000551424	GOLIM4	O00461	696 aa		27.73	■■■□□ 2.03
CNTN1-209	ENST00000551424	VCAM1	P19320	739 aa		27.73	■■■□□ 2.03
CNTN1-209	ENST00000551424	CACNB2	Q08289	660 aa	Predicted RBP	27.73	■■■□□ 2.03
CNTN1-209	ENST00000551424	MORN1	Q5T089	497 aa		27.73	■■■□□ 2.03
CNTN1-209	ENST00000551424	TRMT44	Q8IYL2	757 aa	Known RBP	27.73	■■■□□ 2.03
CNTN1-209	ENST00000551424	USP6NL	Q92738	828 aa		27.73	■■■□□ 2.03
CNTN1-209	ENST00000551424	APBA2	Q99767	749 aa		27.73	■■■□□ 2.03
CNTN1-209	ENST00000551424	KIAA1683	Q9H0B3	1180 aa		27.73	■■■□□ 2.03
CNTN1-209	ENST00000551424	OGDHL	Q9ULD0	1010 aa		27.73	■■■□□ 2.03
CNTN1-209	ENST00000551424	RABGAP1	Q9Y3P9	1069 aa		27.73	■■■□□ 2.03
CNTN1-209	ENST00000551424	MPHOSPH10	O00566	681 aa	Known RBP	27.72	■■■□□ 2.03
CNTN1-209	ENST00000551424	CNMD	O75829	334 aa		27.72	■■■□□ 2.03
CNTN1-209	ENST00000551424	MNX1	P50219	401 aa	Predicted RBP	27.72	■■■□□ 2.03
CNTN1-209	ENST00000551424	CCNA1	P78396	465 aa		27.72	■■■□□ 2.03
CNTN1-209	ENST00000551424	EVX2	Q03828	476 aa		27.72	■■■□□ 2.03
CNTN1-209	ENST00000551424	KIF1BP	Q96EK5	621 aa		27.72	■■■□□ 2.03
CNTN1-209	ENST00000551424	MCM9	Q9NXL9	1143 aa		27.72	■■■□□ 2.03
CNTN1-209	ENST00000551424	ZNF532	Q9HCE3	1301 aa		27.71	■■■□□ 2.03
CNTN1-209	ENST00000551424	IFIT2	P09913	472 aa	Known RBP	27.71	■■■□□ 2.03
CNTN1-209	ENST00000551424	SEPT2	Q15019	361 aa		27.71	■■■□□ 2.03
CNTN1-209	ENST00000551424	CATSPERG	Q6ZRH7	1159 aa		27.71	■■■□□ 2.03
CNTN1-209	ENST00000551424	MS4A1	P11836	297 aa		27.7	■■■□□ 2.02
CNTN1-209	ENST00000551424	CCND3	P30281	292 aa	Predicted RBP	27.7	■■■□□ 2.02
CNTN1-209	ENST00000551424	SDR42E1	Q8WUS8	393 aa		27.7	■■■□□ 2.02
CNTN1-209	ENST00000551424	EDC3	Q96F86	508 aa	Known RBP	27.7	■■■□□ 2.02
CNTN1-209	ENST00000551424	RPAP3	Q9H6T3	665 aa	Predicted RBP	27.7	■■■□□ 2.02
CNTN1-209	ENST00000551424	COG6	Q9Y2V7	657 aa		27.7	■■■□□ 2.02
CNTN1-209	ENST00000551424	HMMR	O75330	724 aa		27.69	■■■□□ 2.02
CNTN1-209	ENST00000551424	GLRX3	O76003	335 aa	Known RBP	27.69	■■■□□ 2.02
CNTN1-209	ENST00000551424	SYN1	P17600	705 aa		27.69	■■■□□ 2.02
CNTN1-209	ENST00000551424	GUCY1A2	P33402	732 aa		27.69	■■■□□ 2.02
CNTN1-209	ENST00000551424	MAP2K5	Q13163	448 aa		27.69	■■■□□ 2.02
CNTN1-209	ENST00000551424	LCORL	Q8N3X6	602 aa		27.69	■■■□□ 2.02
CNTN1-209	ENST00000551424		A0A1W2PPC1	479 aa		27.68	■■■□□ 2.02
CNTN1-209	ENST00000551424	CYP2D6	P10635	497 aa		27.68	■■■□□ 2.02
CNTN1-209	ENST00000551424	GABPA	Q06546	454 aa		27.68	■■■□□ 2.02
CNTN1-209	ENST00000551424	BTBD7	Q9P203	1132 aa		27.68	■■■□□ 2.02
CNTN1-209	ENST00000551424	RPAP2	Q8IXW5	612 aa	Predicted RBP	27.67	■■■□□ 2.02
CNTN1-209	ENST00000551424	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	27.67	■■■□□ 2.02
CNTN1-209	ENST00000551424	ARMT1	Q9H993	441 aa		27.67	■■■□□ 2.02
CNTN1-209	ENST00000551424	IVNS1ABP	Q9Y6Y0	642 aa		27.67	■■■□□ 2.02
CNTN1-209	ENST00000551424	PFAS	O15067	1338 aa		27.67	■■■□□ 2.02
CNTN1-209	ENST00000551424	SPDYE16	A6NNV3	312 aa	Predicted RBP	27.66	■■■□□ 2.02
CNTN1-209	ENST00000551424	SOX1	O00570	391 aa	Predicted RBP	27.66	■■■□□ 2.02
CNTN1-209	ENST00000551424	SIRT2	Q8IXJ6	389 aa		27.66	■■■□□ 2.02
CNTN1-209	ENST00000551424	SLC44A5	Q8NCS7	719 aa		27.66	■■■□□ 2.02
CNTN1-209	ENST00000551424	DCP1A	Q9NPI6	582 aa	Predicted RBP	27.66	■■■□□ 2.02
CNTN1-209	ENST00000551424	DDX19B	Q9UMR2	479 aa		27.66	■■■□□ 2.02
CNTN1-209	ENST00000551424	MYH8	P13535	1937 aa		27.66	■■■□□ 2.02
CNTN1-209	ENST00000551424	RANBP2	P49792	3224 aa	Known RBP	27.66	■■■□□ 2.02
CNTN1-209	ENST00000551424	TCRBV5S4A2T	A0A5A2	114 aa		27.65	■■■□□ 2.02
CNTN1-209	ENST00000551424	SLC15A5	A6NIM6	579 aa		27.65	■■■□□ 2.02
CNTN1-209	ENST00000551424	PTPRE	P23469	700 aa		27.65	■■■□□ 2.02
CNTN1-209	ENST00000551424	MFSD14C	Q5VZR4	134 aa		27.65	■■■□□ 2.02
CNTN1-209	ENST00000551424	LRCH3	Q96II8	777 aa		27.65	■■■□□ 2.02
CNTN1-209	ENST00000551424	FRMPD3	Q5JV73	1810 aa		27.64	■■■□□ 2.02
CNTN1-209	ENST00000551424		A0A1W2PRG0	241 aa		27.64	■■■□□ 2.02
CNTN1-209	ENST00000551424	SLFNL1	Q499Z3	407 aa		27.64	■■■□□ 2.02
CNTN1-209	ENST00000551424	DYNLL2	Q96FJ2	89 aa		27.64	■■■□□ 2.02
CNTN1-209	ENST00000551424	GDF15	Q99988	308 aa		27.64	■■■□□ 2.02
CNTN1-209	ENST00000551424	TANGO6	Q9C0B7	1094 aa		27.64	■■■□□ 2.02
CNTN1-209	ENST00000551424	BOLA2	Q9H3K6	86 aa		27.64	■■■□□ 2.02
CNTN1-209	ENST00000551424	PAG1	Q9NWQ8	432 aa		27.64	■■■□□ 2.02
CNTN1-209	ENST00000551424	FLRT1	Q9NZU1	646 aa		27.64	■■■□□ 2.02
CNTN1-209	ENST00000551424	MBD4	O95243	580 aa		27.63	■■■□□ 2.01
CNTN1-209	ENST00000551424	LHX8	Q68G74	356 aa		27.63	■■■□□ 2.01
CNTN1-209	ENST00000551424	LBX2	Q6XYB7	198 aa		27.63	■■■□□ 2.01
CNTN1-209	ENST00000551424	ZBTB40	Q9NUA8	1239 aa		27.63	■■■□□ 2.01
CNTN1-209	ENST00000551424	BAZ2A	Q9UIF9	1905 aa	Known RBP	27.63	■■■□□ 2.01
CNTN1-209	ENST00000551424	PRKAB2	O43741	272 aa		27.62	■■■□□ 2.01
CNTN1-209	ENST00000551424	RAB11FIP3	O75154	756 aa		27.62	■■■□□ 2.01
CNTN1-209	ENST00000551424	ATP2B2	Q01814	1243 aa		27.62	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms