RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 USP17L22D6RA61 530 aa18.05■□□□□ 0.48
TMEM106C-216ENST00000551305 USP17L17D6RBQ6 530 aa18.05■□□□□ 0.48
TMEM106C-216ENST00000551305 USP17L19D6RCP7 530 aa18.05■□□□□ 0.48
TMEM106C-216ENST00000551305 USP17L20D6RJB6 530 aa18.05■□□□□ 0.48
TMEM106C-216ENST00000551305 IGSF3O75054 1194 aa18.05■□□□□ 0.48
TMEM106C-216ENST00000551305 PLCD1P51178 756 aa18.05■□□□□ 0.48
TMEM106C-216ENST00000551305 USP17L24Q0WX57 530 aa18.05■□□□□ 0.48
TMEM106C-216ENST00000551305 CATSPERGQ6ZRH7 1159 aa18.05■□□□□ 0.48
TMEM106C-216ENST00000551305 TRMT44Q8IYL2 757 aaKnown RBP18.05■□□□□ 0.48
TMEM106C-216ENST00000551305 SLC17A8Q8NDX2 589 aa18.05■□□□□ 0.48
TMEM106C-216ENST00000551305 GTF3C2Q8WUA4 911 aaPredicted RBP18.05■□□□□ 0.48
TMEM106C-216ENST00000551305 C12orf42Q96LP6 360 aa18.05■□□□□ 0.48
TMEM106C-216ENST00000551305 SERPINB13Q9UIV8 391 aa18.05■□□□□ 0.48
TMEM106C-216ENST00000551305 MAP2K5Q13163 448 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 ABCB5Q2M3G0 1257 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 CERKLQ49MI3 558 aaPredicted RBP18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 WDR78Q5VTH9 848 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 APBA2Q99767 749 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 CWC22Q9HCG8 908 aaKnown RBP18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 FLRT1Q9NZU1 646 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 EXOC6BQ9Y2D4 811 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 RABGAP1Q9Y3P9 1069 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 MYH1P12882 1939 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 COL6A1P12109 1028 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 VCAM1P19320 739 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 GUCY1A2P33402 732 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 EVX2Q03828 476 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 MAP3K12Q12852 859 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 LRRC26Q2I0M4 334 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 CEP85Q6P2H3 762 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 TTC6Q86TZ1 520 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 AACSQ86V21 672 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 EDC3Q96F86 508 aaKnown RBP18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 EHD4Q9H223 541 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 BTBD7Q9P203 1132 aa18.04■□□□□ 0.48
TMEM106C-216ENST00000551305 SHMT1P34896 483 aa18.03■□□□□ 0.48
TMEM106C-216ENST00000551305 Q7L0L9 218 aa18.03■□□□□ 0.48
TMEM106C-216ENST00000551305 RIOK1Q9BRS2 568 aaKnown RBP18.03■□□□□ 0.48
TMEM106C-216ENST00000551305 KIAA1683Q9H0B3 1180 aa18.03■□□□□ 0.48
TMEM106C-216ENST00000551305 PTPREP23469 700 aa18.02■□□□□ 0.47
TMEM106C-216ENST00000551305 USP14P54578 494 aa18.02■□□□□ 0.47
TMEM106C-216ENST00000551305 UBE2OQ9C0C9 1292 aaKnown RBP18.02■□□□□ 0.47
TMEM106C-216ENST00000551305 IL1RAPL2Q9NP60 686 aa18.02■□□□□ 0.47
TMEM106C-216ENST00000551305 CABP5Q9NP86 173 aa18.02■□□□□ 0.47
TMEM106C-216ENST00000551305 POLR3DP05423 398 aaPredicted RBP18.01■□□□□ 0.47
TMEM106C-216ENST00000551305 CCNA1P78396 465 aa18.01■□□□□ 0.47
TMEM106C-216ENST00000551305 SEPT2Q15019 361 aa18.01■□□□□ 0.47
TMEM106C-216ENST00000551305 CERS3Q8IU89 383 aa18.01■□□□□ 0.47
TMEM106C-216ENST00000551305 TDHQ8IZJ6 230 aa18.01■□□□□ 0.47
TMEM106C-216ENST00000551305 NPLOC4Q8TAT6 608 aa18.01■□□□□ 0.47
TMEM106C-216ENST00000551305 RPAP3Q9H6T3 665 aaPredicted RBP18.01■□□□□ 0.47
TMEM106C-216ENST00000551305 MAGEB6P1A0A0J9YX57 407 aa18■□□□□ 0.47
TMEM106C-216ENST00000551305 SLC15A5A6NIM6 579 aa18■□□□□ 0.47
TMEM106C-216ENST00000551305 SPDYE16A6NNV3 312 aaPredicted RBP18■□□□□ 0.47
TMEM106C-216ENST00000551305 DLL1O00548 723 aa18■□□□□ 0.47
TMEM106C-216ENST00000551305 GLRX3O76003 335 aaKnown RBP18■□□□□ 0.47
TMEM106C-216ENST00000551305 HNRNPUQ00839 825 aaKnown RBP eCLIP18■□□□□ 0.47
TMEM106C-216ENST00000551305 MDM2Q00987 491 aaPredicted RBP18■□□□□ 0.47
TMEM106C-216ENST00000551305 LRIT3Q3SXY7 679 aa18■□□□□ 0.47
TMEM106C-216ENST00000551305 MFSD14CQ5VZR4 134 aa18■□□□□ 0.47
TMEM106C-216ENST00000551305 DEFB123Q8N688 67 aa18■□□□□ 0.47
TMEM106C-216ENST00000551305 PANK1Q8TE04 598 aa18■□□□□ 0.47
TMEM106C-216ENST00000551305 A0A1W2PRG0 241 aa17.99■□□□□ 0.47
TMEM106C-216ENST00000551305 CNGA1P29973 690 aa17.99■□□□□ 0.47
TMEM106C-216ENST00000551305 ATP2B2Q01814 1243 aa17.99■□□□□ 0.47
TMEM106C-216ENST00000551305 GABPAQ06546 454 aa17.99■□□□□ 0.47
TMEM106C-216ENST00000551305 SENP6Q9GZR1 1112 aaPredicted RBP17.99■□□□□ 0.47
TMEM106C-216ENST00000551305 BCL11AQ9H165 835 aa17.99■□□□□ 0.47
TMEM106C-216ENST00000551305 LAMA3Q16787 3333 aa17.99■□□□□ 0.47
TMEM106C-216ENST00000551305 MPHOSPH10O00566 681 aaKnown RBP17.98■□□□□ 0.47
TMEM106C-216ENST00000551305 CYP2D6P10635 497 aa17.98■□□□□ 0.47
TMEM106C-216ENST00000551305 PDE6AP16499 860 aa17.98■□□□□ 0.47
TMEM106C-216ENST00000551305 CYP2C19P33261 490 aa17.98■□□□□ 0.47
TMEM106C-216ENST00000551305 GRB14Q14449 540 aa17.98■□□□□ 0.47
TMEM106C-216ENST00000551305 SLC9C2Q5TAH2 1124 aa17.98■□□□□ 0.47
TMEM106C-216ENST00000551305 LBX2Q6XYB7 198 aa17.98■□□□□ 0.47
TMEM106C-216ENST00000551305 ERC1Q8IUD2 1116 aa17.98■□□□□ 0.47
TMEM106C-216ENST00000551305 TRPV1Q8NER1 839 aa17.98■□□□□ 0.47
TMEM106C-216ENST00000551305 RHPN1Q8TCX5 695 aa17.98■□□□□ 0.47
TMEM106C-216ENST00000551305 MCM9Q9NXL9 1143 aa17.98■□□□□ 0.47
TMEM106C-216ENST00000551305 DDX20Q9UHI6 824 aaKnown RBP17.98■□□□□ 0.47
TMEM106C-216ENST00000551305 APBB1O00213 710 aa17.97■□□□□ 0.47
TMEM106C-216ENST00000551305 KIAA1755Q5JYT7 1200 aa17.97■□□□□ 0.47
TMEM106C-216ENST00000551305 GPR153Q6NV75 609 aa17.97■□□□□ 0.47
TMEM106C-216ENST00000551305 SDR42E1Q8WUS8 393 aa17.97■□□□□ 0.47
TMEM106C-216ENST00000551305 IVNS1ABPQ9Y6Y0 642 aa17.97■□□□□ 0.47
TMEM106C-216ENST00000551305 ZNF532Q9HCE3 1301 aa17.96■□□□□ 0.47
TMEM106C-216ENST00000551305 HOXC6P09630 235 aa17.96■□□□□ 0.47
TMEM106C-216ENST00000551305 ATN1P54259 1190 aaPredicted RBP17.96■□□□□ 0.47
TMEM106C-216ENST00000551305 SLFNL1Q499Z3 407 aa17.96■□□□□ 0.47
TMEM106C-216ENST00000551305 LCORLQ8N3X6 602 aa17.96■□□□□ 0.47
TMEM106C-216ENST00000551305 SLC44A5Q8NCS7 719 aa17.96■□□□□ 0.47
TMEM106C-216ENST00000551305 MOV10L1Q9BXT6 1211 aaKnown RBP17.96■□□□□ 0.47
TMEM106C-216ENST00000551305 CRNKL1Q9BZJ0 848 aaKnown RBP17.96■□□□□ 0.47
TMEM106C-216ENST00000551305 GOLIM4O00461 696 aa17.95■□□□□ 0.46
TMEM106C-216ENST00000551305 COG2Q14746 738 aa17.95■□□□□ 0.46
TMEM106C-216ENST00000551305 TTF1Q15361 905 aaPredicted RBP17.95■□□□□ 0.46
TMEM106C-216ENST00000551305 TMED8Q6PL24 325 aaPredicted RBP17.95■□□□□ 0.46
TMEM106C-216ENST00000551305 DPP9Q86TI2 863 aa17.95■□□□□ 0.46
TMEM106C-216ENST00000551305 LPAR1Q92633 364 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms