RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 FEZ1Q99689 392 aa18.41■□□□□ 0.54
PRPF40B-211ENST00000551063 KIAA1683Q9H0B3 1180 aa18.41■□□□□ 0.54
PRPF40B-211ENST00000551063 PTPRFP10586 1907 aa18.41■□□□□ 0.54
PRPF40B-211ENST00000551063 MINDY4BA8MYZ0 360 aa18.4■□□□□ 0.54
PRPF40B-211ENST00000551063 FOXP2O15409 715 aa18.4■□□□□ 0.54
PRPF40B-211ENST00000551063 AKR1B1P15121 316 aa18.4■□□□□ 0.54
PRPF40B-211ENST00000551063 SEPT2Q15019 361 aa18.4■□□□□ 0.54
PRPF40B-211ENST00000551063 ARHGEF6Q15052 776 aa18.4■□□□□ 0.54
PRPF40B-211ENST00000551063 USP17L2Q6R6M4 530 aa18.4■□□□□ 0.54
PRPF40B-211ENST00000551063 OTOP1Q7RTM1 612 aa18.4■□□□□ 0.54
PRPF40B-211ENST00000551063 CD99L2Q8TCZ2 262 aa18.4■□□□□ 0.54
PRPF40B-211ENST00000551063 ZNF287Q9HBT7 754 aa18.4■□□□□ 0.54
PRPF40B-211ENST00000551063 LOC285556D6RIA3 1793 aa18.4■□□□□ 0.54
PRPF40B-211ENST00000551063 BAZ2AQ9UIF9 1905 aaKnown RBP18.39■□□□□ 0.53
PRPF40B-211ENST00000551063 NEFLP07196 543 aa18.39■□□□□ 0.53
PRPF40B-211ENST00000551063 BCRP11274 1271 aa18.39■□□□□ 0.53
PRPF40B-211ENST00000551063 GSPT1P15170 499 aaKnown RBP18.39■□□□□ 0.53
PRPF40B-211ENST00000551063 HOXA7P31268 230 aaPredicted RBP18.39■□□□□ 0.53
PRPF40B-211ENST00000551063 MFAP1P55081 439 aaKnown RBP18.39■□□□□ 0.53
PRPF40B-211ENST00000551063 SMCR8Q8TEV9 937 aaPredicted RBP18.39■□□□□ 0.53
PRPF40B-211ENST00000551063 DIAPH3Q9NSV4 1193 aa18.39■□□□□ 0.53
PRPF40B-211ENST00000551063 EMILIN3Q9NT22 766 aa18.39■□□□□ 0.53
PRPF40B-211ENST00000551063 CPA4Q9UI42 421 aa18.39■□□□□ 0.53
PRPF40B-211ENST00000551063 ZMYM6O95789 1325 aa18.39■□□□□ 0.53
PRPF40B-211ENST00000551063 CCDC171Q6TFL3 1326 aa18.39■□□□□ 0.53
PRPF40B-211ENST00000551063 SLC3A2P08195 630 aaKnown RBP18.38■□□□□ 0.53
PRPF40B-211ENST00000551063 OSBPP22059 807 aa18.38■□□□□ 0.53
PRPF40B-211ENST00000551063 ICA1Q05084 483 aa18.38■□□□□ 0.53
PRPF40B-211ENST00000551063 PPARAQ07869 468 aa18.38■□□□□ 0.53
PRPF40B-211ENST00000551063 ALX1Q15699 326 aa18.38■□□□□ 0.53
PRPF40B-211ENST00000551063 VPS53Q5VIR6 699 aa18.38■□□□□ 0.53
PRPF40B-211ENST00000551063 ZNF589Q86UQ0 364 aaPredicted RBP18.38■□□□□ 0.53
PRPF40B-211ENST00000551063 ACER1Q8TDN7 264 aa18.38■□□□□ 0.53
PRPF40B-211ENST00000551063 EFCC1Q9HA90 598 aa18.38■□□□□ 0.53
PRPF40B-211ENST00000551063 MKNK2Q9HBH9 465 aa18.38■□□□□ 0.53
PRPF40B-211ENST00000551063 PTPN22Q9Y2R2 807 aa18.38■□□□□ 0.53
PRPF40B-211ENST00000551063 CENPBP07199 599 aaPredicted RBP18.37■□□□□ 0.53
PRPF40B-211ENST00000551063 RASA1P20936 1047 aa18.37■□□□□ 0.53
PRPF40B-211ENST00000551063 LACTBP83111 547 aaPredicted RBP18.37■□□□□ 0.53
PRPF40B-211ENST00000551063 KIF22Q14807 665 aa18.37■□□□□ 0.53
PRPF40B-211ENST00000551063 SH2D4AQ9H788 454 aa18.37■□□□□ 0.53
PRPF40B-211ENST00000551063 GCLCP48506 637 aaPredicted RBP18.36■□□□□ 0.53
PRPF40B-211ENST00000551063 IRX3P78415 501 aaPredicted RBP18.36■□□□□ 0.53
PRPF40B-211ENST00000551063 PDE4BQ07343 736 aa18.36■□□□□ 0.53
PRPF40B-211ENST00000551063 ASCC2Q9H1I8 757 aaPredicted RBP18.36■□□□□ 0.53
PRPF40B-211ENST00000551063 KANSL2Q9H9L4 492 aa18.36■□□□□ 0.53
PRPF40B-211ENST00000551063 ARHGEF10LQ9HCE6 1279 aa18.36■□□□□ 0.53
PRPF40B-211ENST00000551063 GNRH1P01148 92 aa18.35■□□□□ 0.53
PRPF40B-211ENST00000551063 HSPD1P10809 573 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-211ENST00000551063 VCAM1P19320 739 aa18.35■□□□□ 0.53
PRPF40B-211ENST00000551063 ZYXQ15942 572 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-211ENST00000551063 FAM110CQ1W6H9 321 aa18.35■□□□□ 0.53
PRPF40B-211ENST00000551063 GTF3C2Q8WUA4 911 aaPredicted RBP18.35■□□□□ 0.53
PRPF40B-211ENST00000551063 ANAPC4Q9UJX5 808 aa18.35■□□□□ 0.53
PRPF40B-211ENST00000551063 TMX2Q9Y320 296 aa18.35■□□□□ 0.53
PRPF40B-211ENST00000551063 PLIN4Q96Q06 1357 aa18.34■□□□□ 0.53
PRPF40B-211ENST00000551063 RAD50Q92878 1312 aa18.34■□□□□ 0.53
PRPF40B-211ENST00000551063 A0A1W2PRG0 241 aa18.34■□□□□ 0.53
PRPF40B-211ENST00000551063 CAP1Q01518 475 aa18.34■□□□□ 0.53
PRPF40B-211ENST00000551063 CWC27Q6UX04 472 aaKnown RBP18.34■□□□□ 0.53
PRPF40B-211ENST00000551063 CLEC10AQ8IUN9 316 aa18.34■□□□□ 0.53
PRPF40B-211ENST00000551063 ZNF444Q8N0Y2 327 aaPredicted RBP18.34■□□□□ 0.53
PRPF40B-211ENST00000551063 LPAR1Q92633 364 aa18.34■□□□□ 0.53
PRPF40B-211ENST00000551063 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.34■□□□□ 0.53
PRPF40B-211ENST00000551063 USP17L15C9J2P7 530 aa18.33■□□□□ 0.52
PRPF40B-211ENST00000551063 USP17L13C9JLJ4 530 aa18.33■□□□□ 0.52
PRPF40B-211ENST00000551063 USP17L11C9JVI0 530 aa18.33■□□□□ 0.52
PRPF40B-211ENST00000551063 USP17L18D6R9N7 530 aa18.33■□□□□ 0.52
PRPF40B-211ENST00000551063 USP17L22D6RA61 530 aa18.33■□□□□ 0.52
PRPF40B-211ENST00000551063 USP17L17D6RBQ6 530 aa18.33■□□□□ 0.52
PRPF40B-211ENST00000551063 USP17L19D6RCP7 530 aa18.33■□□□□ 0.52
PRPF40B-211ENST00000551063 USP17L20D6RJB6 530 aa18.33■□□□□ 0.52
PRPF40B-211ENST00000551063 FGAP02671 866 aa18.33■□□□□ 0.52
PRPF40B-211ENST00000551063 USP17L24Q0WX57 530 aa18.33■□□□□ 0.52
PRPF40B-211ENST00000551063 SIAH1Q8IUQ4 282 aa18.33■□□□□ 0.52
PRPF40B-211ENST00000551063 STK11IPQ8N1F8 1099 aa18.33■□□□□ 0.52
PRPF40B-211ENST00000551063 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.33■□□□□ 0.52
PRPF40B-211ENST00000551063 IGKV6D-41A0A0C4DH26 115 aa18.32■□□□□ 0.52
PRPF40B-211ENST00000551063 PRDM1O75626 825 aa18.32■□□□□ 0.52
PRPF40B-211ENST00000551063 SLC34A2O95436 690 aa18.32■□□□□ 0.52
PRPF40B-211ENST00000551063 PRMT2P55345 433 aa18.32■□□□□ 0.52
PRPF40B-211ENST00000551063 HERVK_113P62684 666 aa18.32■□□□□ 0.52
PRPF40B-211ENST00000551063 CCDC136Q96JN2 1154 aa18.32■□□□□ 0.52
PRPF40B-211ENST00000551063 ARHGAP39Q9C0H5 1083 aa18.32■□□□□ 0.52
PRPF40B-211ENST00000551063 VCPKMTQ9H867 229 aa18.32■□□□□ 0.52
PRPF40B-211ENST00000551063 MORF4L1Q9UBU8 362 aa18.32■□□□□ 0.52
PRPF40B-211ENST00000551063 PDE4DIPQ5VU43 2346 aa18.32■□□□□ 0.52
PRPF40B-211ENST00000551063 FGRP09769 529 aa18.31■□□□□ 0.52
PRPF40B-211ENST00000551063 EEF2P13639 858 aaKnown RBP18.31■□□□□ 0.52
PRPF40B-211ENST00000551063 PSMC4P43686 418 aa18.31■□□□□ 0.52
PRPF40B-211ENST00000551063 FCGRTP55899 365 aa18.31■□□□□ 0.52
PRPF40B-211ENST00000551063 PRPF38BQ5VTL8 546 aaKnown RBP18.31■□□□□ 0.52
PRPF40B-211ENST00000551063 CATSPERGQ6ZRH7 1159 aa18.31■□□□□ 0.52
PRPF40B-211ENST00000551063 ANKRD13CQ8N6S4 541 aa18.31■□□□□ 0.52
PRPF40B-211ENST00000551063 NEDD1Q8NHV4 660 aa18.31■□□□□ 0.52
PRPF40B-211ENST00000551063 P2RX7Q99572 595 aaKnown RBP18.31■□□□□ 0.52
PRPF40B-211ENST00000551063 DSCC1Q9BVC3 393 aa18.31■□□□□ 0.52
PRPF40B-211ENST00000551063 NYAP2Q9P242 653 aa18.31■□□□□ 0.52
PRPF40B-211ENST00000551063 SYNPO2Q9UMS6 1093 aa18.31■□□□□ 0.52
PRPF40B-211ENST00000551063 GREB1LQ9C091 1923 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms