RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 OGDHLQ9ULD0 1010 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 RABGAP1Q9Y3P9 1069 aa25.1■■□□□ 1.61
CACNB3-218ENST00000550771 PLXNB2O15031 1838 aa25.09■■□□□ 1.61
CACNB3-218ENST00000550771 PRKAR2AP13861 404 aaKnown RBP25.09■■□□□ 1.61
CACNB3-218ENST00000550771 RGS2P41220 211 aa25.09■■□□□ 1.61
CACNB3-218ENST00000550771 RAB3GAP1Q15042 981 aa25.09■■□□□ 1.61
CACNB3-218ENST00000550771 MORN1Q5T089 497 aa25.09■■□□□ 1.61
CACNB3-218ENST00000550771 PLEKHH3Q7Z736 793 aa25.09■■□□□ 1.61
CACNB3-218ENST00000550771 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.09■■□□□ 1.61
CACNB3-218ENST00000550771 IL1RAPL2Q9NP60 686 aa25.09■■□□□ 1.61
CACNB3-218ENST00000550771 CABP5Q9NP86 173 aa25.09■■□□□ 1.61
CACNB3-218ENST00000550771 MAGEB6P1A0A0J9YX57 407 aa25.08■■□□□ 1.61
CACNB3-218ENST00000550771 ZKSCAN1P17029 563 aaPredicted RBP25.08■■□□□ 1.61
CACNB3-218ENST00000550771 SHMT1P34896 483 aa25.08■■□□□ 1.61
CACNB3-218ENST00000550771 MNX1P50219 401 aaPredicted RBP25.08■■□□□ 1.61
CACNB3-218ENST00000550771 PLCD1P51178 756 aa25.08■■□□□ 1.61
CACNB3-218ENST00000550771 CLASRPQ8N2M8 674 aaKnown RBP25.08■■□□□ 1.61
CACNB3-218ENST00000550771 MYH1P12882 1939 aa25.08■■□□□ 1.6
CACNB3-218ENST00000550771 RANBP2P49792 3224 aaKnown RBP25.07■■□□□ 1.6
CACNB3-218ENST00000550771 CCNA1P78396 465 aa25.07■■□□□ 1.6
CACNB3-218ENST00000550771 GABPAQ06546 454 aa25.07■■□□□ 1.6
CACNB3-218ENST00000550771 ZYXQ15942 572 aaKnown RBP25.07■■□□□ 1.6
CACNB3-218ENST00000550771 SLC9C2Q5TAH2 1124 aa25.07■■□□□ 1.6
CACNB3-218ENST00000550771 CATSPERGQ6ZRH7 1159 aa25.07■■□□□ 1.6
CACNB3-218ENST00000550771 RPAP2Q8IXW5 612 aaPredicted RBP25.07■■□□□ 1.6
CACNB3-218ENST00000550771 KIF1BPQ96EK5 621 aa25.07■■□□□ 1.6
CACNB3-218ENST00000550771 APBA2Q99767 749 aa25.07■■□□□ 1.6
CACNB3-218ENST00000550771 POLR3DP05423 398 aaPredicted RBP25.06■■□□□ 1.6
CACNB3-218ENST00000550771 PDE6AP16499 860 aa25.06■■□□□ 1.6
CACNB3-218ENST00000550771 VCAM1P19320 739 aa25.06■■□□□ 1.6
CACNB3-218ENST00000550771 LBX2Q6XYB7 198 aa25.06■■□□□ 1.6
CACNB3-218ENST00000550771 ACER1Q8TDN7 264 aa25.06■■□□□ 1.6
CACNB3-218ENST00000550771 CRNKL1Q9BZJ0 848 aaKnown RBP25.06■■□□□ 1.6
CACNB3-218ENST00000550771 C11orf49Q9H6J7 331 aa25.06■■□□□ 1.6
CACNB3-218ENST00000550771 HMMRO75330 724 aa25.05■■□□□ 1.6
CACNB3-218ENST00000550771 CNMDO75829 334 aa25.05■■□□□ 1.6
CACNB3-218ENST00000550771 GLRX3O76003 335 aaKnown RBP25.05■■□□□ 1.6
CACNB3-218ENST00000550771 CACNB2Q08289 660 aaPredicted RBP25.05■■□□□ 1.6
CACNB3-218ENST00000550771 DIEXFQ68CQ4 756 aaKnown RBP25.05■■□□□ 1.6
CACNB3-218ENST00000550771 GUCY1A2P33402 732 aa25.04■■□□□ 1.6
CACNB3-218ENST00000550771 CWC22Q9HCG8 908 aaKnown RBP25.04■■□□□ 1.6
CACNB3-218ENST00000550771 STAP2Q9UGK3 403 aa25.04■■□□□ 1.6
CACNB3-218ENST00000550771 IFIT2P09913 472 aaKnown RBP25.03■■□□□ 1.6
CACNB3-218ENST00000550771 MAP2K5Q13163 448 aa25.03■■□□□ 1.6
CACNB3-218ENST00000550771 CCL14Q16627 93 aa25.03■■□□□ 1.6
CACNB3-218ENST00000550771 C7orf61Q8IZ16 206 aa25.03■■□□□ 1.6
CACNB3-218ENST00000550771 MCM9Q9NXL9 1143 aa25.03■■□□□ 1.6
CACNB3-218ENST00000550771 DDX19BQ9UMR2 479 aa25.03■■□□□ 1.6
CACNB3-218ENST00000550771 ZNF532Q9HCE3 1301 aa25.03■■□□□ 1.6
CACNB3-218ENST00000550771 SZT2Q5T011 3432 aa25.02■■□□□ 1.6
CACNB3-218ENST00000550771 TCRBV5S4A2TA0A5A2 114 aa25.02■■□□□ 1.6
CACNB3-218ENST00000550771 GOLIM4O00461 696 aa25.02■■□□□ 1.6
CACNB3-218ENST00000550771 RAB11FIP3O75154 756 aa25.02■■□□□ 1.6
CACNB3-218ENST00000550771 BMP8BP34820 402 aa25.02■■□□□ 1.6
CACNB3-218ENST00000550771 EDC3Q96F86 508 aaKnown RBP25.02■■□□□ 1.6
CACNB3-218ENST00000550771 RPAP3Q9H6T3 665 aaPredicted RBP25.02■■□□□ 1.6
CACNB3-218ENST00000550771 ZBTB40Q9NUA8 1239 aa25.02■■□□□ 1.6
CACNB3-218ENST00000550771 DDX60LQ5H9U9 1706 aaKnown RBP25.01■■□□□ 1.59
CACNB3-218ENST00000550771 SEPT2Q15019 361 aa25.01■■□□□ 1.59
CACNB3-218ENST00000550771 LHX8Q68G74 356 aa25.01■■□□□ 1.59
CACNB3-218ENST00000550771 SIRT2Q8IXJ6 389 aa25.01■■□□□ 1.59
CACNB3-218ENST00000550771 DNAJC2Q99543 621 aaKnown RBP25.01■■□□□ 1.59
CACNB3-218ENST00000550771 GDF15Q99988 308 aa25.01■■□□□ 1.59
CACNB3-218ENST00000550771 DCP1AQ9NPI6 582 aaPredicted RBP25.01■■□□□ 1.59
CACNB3-218ENST00000550771 SLC15A5A6NIM6 579 aa25■■□□□ 1.59
CACNB3-218ENST00000550771 SPDYE16A6NNV3 312 aaPredicted RBP25■■□□□ 1.59
CACNB3-218ENST00000550771 APBB1O00213 710 aa25■■□□□ 1.59
CACNB3-218ENST00000550771 PTPREP23469 700 aa25■■□□□ 1.59
CACNB3-218ENST00000550771 CCND3P30281 292 aaPredicted RBP25■■□□□ 1.59
CACNB3-218ENST00000550771 SDR42E1Q8WUS8 393 aa25■■□□□ 1.59
CACNB3-218ENST00000550771 BTBD7Q9P203 1132 aa25■■□□□ 1.59
CACNB3-218ENST00000550771 ALPK3Q96L96 1907 aa25■■□□□ 1.59
CACNB3-218ENST00000550771 PFASO15067 1338 aa24.99■■□□□ 1.59
CACNB3-218ENST00000550771 HOXC6P09630 235 aa24.99■■□□□ 1.59
CACNB3-218ENST00000550771 COL6A1P12109 1028 aa24.99■■□□□ 1.59
CACNB3-218ENST00000550771 MFSD14CQ5VZR4 134 aa24.99■■□□□ 1.59
CACNB3-218ENST00000550771 LCORLQ8N3X6 602 aa24.99■■□□□ 1.59
CACNB3-218ENST00000550771 CHMP4BQ9H444 224 aaKnown RBP24.99■■□□□ 1.59
CACNB3-218ENST00000550771 SWAP70Q9UH65 585 aa24.99■■□□□ 1.59
CACNB3-218ENST00000550771 ZMYND8Q9ULU4 1186 aaPredicted RBP24.99■■□□□ 1.59
CACNB3-218ENST00000550771 IVNS1ABPQ9Y6Y0 642 aa24.99■■□□□ 1.59
CACNB3-218ENST00000550771 GRB14Q14449 540 aa24.98■■□□□ 1.59
CACNB3-218ENST00000550771 WDR78Q5VTH9 848 aa24.98■■□□□ 1.59
CACNB3-218ENST00000550771 HOXC10Q9NYD6 342 aa24.98■■□□□ 1.59
CACNB3-218ENST00000550771 COG6Q9Y2V7 657 aa24.98■■□□□ 1.59
CACNB3-218ENST00000550771 A0A1W2PRG0 241 aa24.97■■□□□ 1.59
CACNB3-218ENST00000550771 MPHOSPH10O00566 681 aaKnown RBP24.97■■□□□ 1.59
CACNB3-218ENST00000550771 EVX2Q03828 476 aa24.97■■□□□ 1.59
CACNB3-218ENST00000550771 COG2Q14746 738 aa24.97■■□□□ 1.59
CACNB3-218ENST00000550771 TMEM179Q6ZVK1 233 aa24.97■■□□□ 1.59
CACNB3-218ENST00000550771 PAG1Q9NWQ8 432 aa24.97■■□□□ 1.59
CACNB3-218ENST00000550771 ATP5JP18859 108 aa24.96■■□□□ 1.59
CACNB3-218ENST00000550771 ADD2P35612 726 aa24.96■■□□□ 1.59
CACNB3-218ENST00000550771 ATP8A2Q9NTI2 1148 aa24.96■■□□□ 1.59
CACNB3-218ENST00000550771 FLRT1Q9NZU1 646 aa24.96■■□□□ 1.59
CACNB3-218ENST00000550771 NAV1Q8NEY1 1877 aa24.96■■□□□ 1.59
CACNB3-218ENST00000550771 SOX1O00570 391 aaPredicted RBP24.95■■□□□ 1.58
CACNB3-218ENST00000550771 SLC44A5Q8NCS7 719 aa24.95■■□□□ 1.58
CACNB3-218ENST00000550771 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.95■■□□□ 1.58
CACNB3-218ENST00000550771 BOLA2Q9H3K6 86 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms