RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 SCAND2PQ9GZW5 306 aaPredicted RBP14.61□□□□□ -0.07
CACNB3-217ENST00000550483 CFAP45Q9UL16 551 aa14.61□□□□□ -0.07
CACNB3-217ENST00000550483 SPDYE2BA6NHP3 402 aa14.6□□□□□ -0.07
CACNB3-217ENST00000550483 SLC34A2O95436 690 aa14.6□□□□□ -0.07
CACNB3-217ENST00000550483 SPDYE6P0CI01 402 aa14.6□□□□□ -0.07
CACNB3-217ENST00000550483 FDPSP14324 419 aaKnown RBP14.6□□□□□ -0.07
CACNB3-217ENST00000550483 CDC27P30260 824 aa14.6□□□□□ -0.07
CACNB3-217ENST00000550483 ADD1P35611 737 aaKnown RBP14.6□□□□□ -0.07
CACNB3-217ENST00000550483 EIF6P56537 245 aaKnown RBP14.6□□□□□ -0.07
CACNB3-217ENST00000550483 FBXO18Q8NFZ0 1043 aa14.6□□□□□ -0.07
CACNB3-217ENST00000550483 NUP133Q8WUM0 1156 aa14.6□□□□□ -0.07
CACNB3-217ENST00000550483 DYNLL2Q96FJ2 89 aa14.6□□□□□ -0.07
CACNB3-217ENST00000550483 TRIM34Q9BYJ4 488 aa14.6□□□□□ -0.07
CACNB3-217ENST00000550483 FAM217BQ9NTX9 383 aaPredicted RBP14.6□□□□□ -0.07
CACNB3-217ENST00000550483 MYH1P12882 1939 aa14.6□□□□□ -0.07
CACNB3-217ENST00000550483 ELP1O95163 1332 aa14.6□□□□□ -0.07
CACNB3-217ENST00000550483 ECM29Q5VYK3 1845 aa14.59□□□□□ -0.07
CACNB3-217ENST00000550483 RAD17O75943 681 aa14.59□□□□□ -0.07
CACNB3-217ENST00000550483 TOP1P11387 765 aaKnown RBP14.59□□□□□ -0.07
CACNB3-217ENST00000550483 SMARCA1P28370 1054 aa14.59□□□□□ -0.07
CACNB3-217ENST00000550483 CXCL9Q07325 125 aa14.59□□□□□ -0.07
CACNB3-217ENST00000550483 RESTQ13127 1097 aa14.59□□□□□ -0.07
CACNB3-217ENST00000550483 FAM47AQ5JRC9 791 aa14.59□□□□□ -0.07
CACNB3-217ENST00000550483 METTL16Q86W50 562 aaKnown RBP14.59□□□□□ -0.07
CACNB3-217ENST00000550483 CRACR2BQ8N4Y2 399 aaPredicted RBP14.59□□□□□ -0.07
CACNB3-217ENST00000550483 NKX2-3Q8TAU0 364 aa14.59□□□□□ -0.07
CACNB3-217ENST00000550483 DPF2Q92785 391 aa14.59□□□□□ -0.07
CACNB3-217ENST00000550483 ZNF396Q96N95 335 aaPredicted RBP14.59□□□□□ -0.07
CACNB3-217ENST00000550483 ALG1Q9BT22 464 aa14.59□□□□□ -0.07
CACNB3-217ENST00000550483 SENP2Q9HC62 589 aa14.59□□□□□ -0.07
CACNB3-217ENST00000550483 DDX4Q9NQI0 724 aaKnown RBP14.59□□□□□ -0.07
CACNB3-217ENST00000550483 LMBRD1Q9NUN5 540 aa14.59□□□□□ -0.07
CACNB3-217ENST00000550483 HERC5Q9UII4 1024 aaKnown RBP14.59□□□□□ -0.07
CACNB3-217ENST00000550483 PRPF3O43395 683 aaKnown RBP14.58□□□□□ -0.08
CACNB3-217ENST00000550483 VEGFAP15692 232 aaPredicted RBP14.58□□□□□ -0.08
CACNB3-217ENST00000550483 SAFBQ15424 915 aaKnown RBP eCLIP14.58□□□□□ -0.08
CACNB3-217ENST00000550483 SPDYE2Q495Y8 402 aa14.58□□□□□ -0.08
CACNB3-217ENST00000550483 FOXD4L5Q5VV16 416 aaPredicted RBP14.58□□□□□ -0.08
CACNB3-217ENST00000550483 RCSD1Q6JBY9 416 aa14.58□□□□□ -0.08
CACNB3-217ENST00000550483 TMTC3Q6ZXV5 915 aa14.58□□□□□ -0.08
CACNB3-217ENST00000550483 FAM83AQ86UY5 434 aa14.58□□□□□ -0.08
CACNB3-217ENST00000550483 PNMA1Q8ND90 353 aa14.58□□□□□ -0.08
CACNB3-217ENST00000550483 FOXD4L4Q8WXT5 416 aaPredicted RBP14.58□□□□□ -0.08
CACNB3-217ENST00000550483 SYNPO2Q9UMS6 1093 aa14.58□□□□□ -0.08
CACNB3-217ENST00000550483 COL4A5P29400 1685 aa14.58□□□□□ -0.08
CACNB3-217ENST00000550483 SBF1O95248 1867 aa14.57□□□□□ -0.08
CACNB3-217ENST00000550483 POTECB2RU33 542 aa14.57□□□□□ -0.08
CACNB3-217ENST00000550483 SMIM22K7EJ46 135 aa14.57□□□□□ -0.08
CACNB3-217ENST00000550483 FZD9O00144 591 aa14.57□□□□□ -0.08
CACNB3-217ENST00000550483 TNNI2P48788 182 aa14.57□□□□□ -0.08
CACNB3-217ENST00000550483 ZNF280AP59817 542 aaPredicted RBP14.57□□□□□ -0.08
CACNB3-217ENST00000550483 TNFAIP1Q13829 316 aa14.57□□□□□ -0.08
CACNB3-217ENST00000550483 GRM4Q14833 912 aa14.57□□□□□ -0.08
CACNB3-217ENST00000550483 FAM151AQ8WW52 585 aa14.57□□□□□ -0.08
CACNB3-217ENST00000550483 SYAP1Q96A49 352 aaPredicted RBP14.57□□□□□ -0.08
CACNB3-217ENST00000550483 MYL10Q9BUA6 226 aa14.57□□□□□ -0.08
CACNB3-217ENST00000550483 SLC26A6Q9BXS9 759 aa14.57□□□□□ -0.08
CACNB3-217ENST00000550483 IL17RBQ9NRM6 502 aa14.57□□□□□ -0.08
CACNB3-217ENST00000550483 FAM198AQ9UFP1 575 aa14.57□□□□□ -0.08
CACNB3-217ENST00000550483 ISY1Q9ULR0 285 aaKnown RBP14.57□□□□□ -0.08
CACNB3-217ENST00000550483 DDX49Q9Y6V7 483 aaKnown RBP14.57□□□□□ -0.08
CACNB3-217ENST00000550483 IGKV6D-41A0A0C4DH26 115 aa14.56□□□□□ -0.08
CACNB3-217ENST00000550483 GLTPD2A6NH11 291 aa14.56□□□□□ -0.08
CACNB3-217ENST00000550483 FOXN1O15353 648 aa14.56□□□□□ -0.08
CACNB3-217ENST00000550483 PRPF40AO75400 957 aaKnown RBP14.56□□□□□ -0.08
CACNB3-217ENST00000550483 RXRAP19793 462 aa14.56□□□□□ -0.08
CACNB3-217ENST00000550483 UBE2HP62256 183 aa14.56□□□□□ -0.08
CACNB3-217ENST00000550483 NFIAQ12857 509 aa14.56□□□□□ -0.08
CACNB3-217ENST00000550483 TATDN1Q6P1N9 297 aa14.56□□□□□ -0.08
CACNB3-217ENST00000550483 NBPF11Q86T75 865 aa14.56□□□□□ -0.08
CACNB3-217ENST00000550483 ZSCAN29Q8IWY8 852 aaPredicted RBP14.56□□□□□ -0.08
CACNB3-217ENST00000550483 SLC44A5Q8NCS7 719 aa14.56□□□□□ -0.08
CACNB3-217ENST00000550483 ZBED3Q96IU2 234 aaPredicted RBP14.56□□□□□ -0.08
CACNB3-217ENST00000550483 PRMT6Q96LA8 375 aaPredicted RBP14.56□□□□□ -0.08
CACNB3-217ENST00000550483 TDRD3Q9H7E2 651 aaKnown RBP14.56□□□□□ -0.08
CACNB3-217ENST00000550483 ZNF70Q9UC06 446 aaPredicted RBP14.56□□□□□ -0.08
CACNB3-217ENST00000550483 STX8Q9UNK0 236 aa14.56□□□□□ -0.08
CACNB3-217ENST00000550483 TTLL1O95922 423 aa14.55□□□□□ -0.08
CACNB3-217ENST00000550483 SHMT1P34896 483 aa14.55□□□□□ -0.08
CACNB3-217ENST00000550483 EVX2Q03828 476 aa14.55□□□□□ -0.08
CACNB3-217ENST00000550483 RAB11FIP4Q86YS3 637 aa14.55□□□□□ -0.08
CACNB3-217ENST00000550483 CCDC144CPQ8IYA2 1237 aa14.55□□□□□ -0.08
CACNB3-217ENST00000550483 TMEM47Q9BQJ4 181 aa14.55□□□□□ -0.08
CACNB3-217ENST00000550483 BRMS1Q9HCU9 246 aa14.55□□□□□ -0.08
CACNB3-217ENST00000550483 MTMR4Q9NYA4 1195 aa14.55□□□□□ -0.08
CACNB3-217ENST00000550483 TBC1D12O60347 775 aa14.54□□□□□ -0.08
CACNB3-217ENST00000550483 NMT2O60551 498 aa14.54□□□□□ -0.08
CACNB3-217ENST00000550483 LMNB1P20700 586 aa14.54□□□□□ -0.08
CACNB3-217ENST00000550483 DNM1Q05193 864 aaKnown RBP14.54□□□□□ -0.08
CACNB3-217ENST00000550483 GNL2Q13823 731 aaKnown RBP14.54□□□□□ -0.08
CACNB3-217ENST00000550483 SLC4A8Q2Y0W8 1093 aa14.54□□□□□ -0.08
CACNB3-217ENST00000550483 ASPRV1Q53RT3 343 aa14.54□□□□□ -0.08
CACNB3-217ENST00000550483 KRT40Q6A162 431 aa14.54□□□□□ -0.08
CACNB3-217ENST00000550483 TMEM179Q6ZVK1 233 aa14.54□□□□□ -0.08
CACNB3-217ENST00000550483 FERMT3Q86UX7 667 aa14.54□□□□□ -0.08
CACNB3-217ENST00000550483 PHKBQ93100 1093 aa14.54□□□□□ -0.08
CACNB3-217ENST00000550483 KANSL2Q9H9L4 492 aa14.54□□□□□ -0.08
CACNB3-217ENST00000550483 MYOZ2Q9NPC6 264 aa14.54□□□□□ -0.08
CACNB3-217ENST00000550483 SH3GLB2Q9NR46 395 aa14.54□□□□□ -0.08
CACNB3-217ENST00000550483 ADAMTSL1Q8N6G6 1762 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms