RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 ZSWIM8A7E2V4 1837 aa24■■□□□ 1.43
GCN1-207ENST00000550471 HTTP42858 3142 aa23.99■■□□□ 1.43
GCN1-207ENST00000550471 CCL5P13501 91 aa23.99■■□□□ 1.43
GCN1-207ENST00000550471 RRP1P56182 461 aaKnown RBP23.99■■□□□ 1.43
GCN1-207ENST00000550471 KBTBD3Q8NAB2 608 aa23.99■■□□□ 1.43
GCN1-207ENST00000550471 DDX60LQ5H9U9 1706 aaKnown RBP23.98■■□□□ 1.43
GCN1-207ENST00000550471 NAV1Q8NEY1 1877 aa23.98■■□□□ 1.43
GCN1-207ENST00000550471 GLRX3O76003 335 aaKnown RBP23.98■■□□□ 1.43
GCN1-207ENST00000550471 GIMAP6Q6P9H5 292 aa23.98■■□□□ 1.43
GCN1-207ENST00000550471 RABGAP1Q9Y3P9 1069 aa23.98■■□□□ 1.43
GCN1-207ENST00000550471 SMARCA5O60264 1052 aaPredicted RBP23.97■■□□□ 1.43
GCN1-207ENST00000550471 MTFR1Q15390 333 aa23.97■■□□□ 1.43
GCN1-207ENST00000550471 LBX2Q6XYB7 198 aa23.97■■□□□ 1.43
GCN1-207ENST00000550471 ARPP21Q9UBL0 812 aaPredicted RBP23.97■■□□□ 1.43
GCN1-207ENST00000550471 MPHOSPH10O00566 681 aaKnown RBP23.96■■□□□ 1.43
GCN1-207ENST00000550471 XRCC5P13010 732 aaKnown RBP23.96■■□□□ 1.43
GCN1-207ENST00000550471 GNAT2P19087 354 aa23.96■■□□□ 1.43
GCN1-207ENST00000550471 ERVK-9P63128 1117 aa23.96■■□□□ 1.43
GCN1-207ENST00000550471 ERVK-24P63145 666 aa23.96■■□□□ 1.43
GCN1-207ENST00000550471 C12orf60Q5U649 245 aa23.96■■□□□ 1.43
GCN1-207ENST00000550471 CATSPERGQ6ZRH7 1159 aa23.96■■□□□ 1.43
GCN1-207ENST00000550471 NUDT12Q9BQG2 462 aa23.96■■□□□ 1.43
GCN1-207ENST00000550471 ARHGEF10LQ9HCE6 1279 aa23.96■■□□□ 1.43
GCN1-207ENST00000550471 SLC4A4Q9Y6R1 1079 aa23.96■■□□□ 1.43
GCN1-207ENST00000550471 MYCP01106 439 aaPredicted RBP23.95■■□□□ 1.42
GCN1-207ENST00000550471 HMGCRP04035 888 aa23.95■■□□□ 1.42
GCN1-207ENST00000550471 INHAP05111 366 aa23.95■■□□□ 1.42
GCN1-207ENST00000550471 APPBP2Q92624 585 aa23.95■■□□□ 1.42
GCN1-207ENST00000550471 LPAR1Q92633 364 aa23.95■■□□□ 1.42
GCN1-207ENST00000550471 HOXC10Q9NYD6 342 aa23.95■■□□□ 1.42
GCN1-207ENST00000550471 RBPJLQ9UBG7 517 aa23.95■■□□□ 1.42
GCN1-207ENST00000550471 GJD2Q9UKL4 321 aa23.95■■□□□ 1.42
GCN1-207ENST00000550471 SGPL1O95470 568 aa23.94■■□□□ 1.42
GCN1-207ENST00000550471 VCAM1P19320 739 aa23.94■■□□□ 1.42
GCN1-207ENST00000550471 SEPT2Q15019 361 aa23.94■■□□□ 1.42
GCN1-207ENST00000550471 SHROOM1Q2M3G4 852 aaPredicted RBP23.94■■□□□ 1.42
GCN1-207ENST00000550471 HTATIP2Q9BUP3 242 aa23.94■■□□□ 1.42
GCN1-207ENST00000550471 ZNF287Q9HBT7 754 aa23.94■■□□□ 1.42
GCN1-207ENST00000550471 USP17L12C9JPN9 530 aa23.93■■□□□ 1.42
GCN1-207ENST00000550471 USP17L21D6R901 530 aa23.93■■□□□ 1.42
GCN1-207ENST00000550471 RNF113AO15541 343 aaKnown RBP23.93■■□□□ 1.42
GCN1-207ENST00000550471 GUCY1A2P33402 732 aa23.93■■□□□ 1.42
GCN1-207ENST00000550471 SBK1Q52WX2 424 aa23.93■■□□□ 1.42
GCN1-207ENST00000550471 C16orf86Q6ZW13 317 aa23.93■■□□□ 1.42
GCN1-207ENST00000550471 U2AF1L4Q8WU68 220 aaKnown RBP23.93■■□□□ 1.42
GCN1-207ENST00000550471 CWC22Q9HCG8 908 aaKnown RBP23.93■■□□□ 1.42
GCN1-207ENST00000550471 PCDHB15Q9Y5E8 787 aa23.93■■□□□ 1.42
GCN1-207ENST00000550471 TNRC18O15417 2968 aaPredicted RBP23.93■■□□□ 1.42
GCN1-207ENST00000550471 MYH7P12883 1935 aa23.92■■□□□ 1.42
GCN1-207ENST00000550471 ELNP15502 786 aa23.92■■□□□ 1.42
GCN1-207ENST00000550471 ZYXQ15942 572 aaKnown RBP23.92■■□□□ 1.42
GCN1-207ENST00000550471 ACER1Q8TDN7 264 aa23.92■■□□□ 1.42
GCN1-207ENST00000550471 STRBPQ96SI9 672 aaKnown RBP23.92■■□□□ 1.42
GCN1-207ENST00000550471 PUS7LQ9H0K6 701 aaKnown RBP23.92■■□□□ 1.42
GCN1-207ENST00000550471 PAK6Q9NQU5 681 aaPredicted RBP23.92■■□□□ 1.42
GCN1-207ENST00000550471 PRKAB2O43741 272 aa23.91■■□□□ 1.42
GCN1-207ENST00000550471 RGS2P41220 211 aa23.91■■□□□ 1.42
GCN1-207ENST00000550471 CDK8P49336 464 aa23.91■■□□□ 1.42
GCN1-207ENST00000550471 COG2Q14746 738 aa23.91■■□□□ 1.42
GCN1-207ENST00000550471 PLEKHH3Q7Z736 793 aa23.91■■□□□ 1.42
GCN1-207ENST00000550471 TICAM2Q86XR7 235 aa23.91■■□□□ 1.42
GCN1-207ENST00000550471 MB21D1Q8N884 522 aa23.91■■□□□ 1.42
GCN1-207ENST00000550471 UNC93B1Q9H1C4 597 aa23.91■■□□□ 1.42
GCN1-207ENST00000550471 KANSL2Q9H9L4 492 aa23.91■■□□□ 1.42
GCN1-207ENST00000550471 TXNRD2Q9NNW7 524 aa23.91■■□□□ 1.42
GCN1-207ENST00000550471 RPTORQ8N122 1335 aa23.9■■□□□ 1.42
GCN1-207ENST00000550471 ICA1Q05084 483 aa23.9■■□□□ 1.42
GCN1-207ENST00000550471 PAGR1Q9BTK6 254 aa23.9■■□□□ 1.42
GCN1-207ENST00000550471 RPAP3Q9H6T3 665 aaPredicted RBP23.9■■□□□ 1.42
GCN1-207ENST00000550471 HMX1Q9NP08 348 aaPredicted RBP23.9■■□□□ 1.42
GCN1-207ENST00000550471 TMX2Q9Y320 296 aa23.9■■□□□ 1.42
GCN1-207ENST00000550471 CYP2D6P10635 497 aa23.89■■□□□ 1.41
GCN1-207ENST00000550471 HDAC1Q13547 482 aaPredicted RBP23.89■■□□□ 1.41
GCN1-207ENST00000550471 CTR9Q6PD62 1173 aa23.89■■□□□ 1.41
GCN1-207ENST00000550471 GPR142Q7Z601 462 aa23.89■■□□□ 1.41
GCN1-207ENST00000550471 ANKLE1Q8NAG6 615 aa23.89■■□□□ 1.41
GCN1-207ENST00000550471 SHISA4Q96DD7 197 aa23.89■■□□□ 1.41
GCN1-207ENST00000550471 NACAP1Q9BZK3 213 aa23.89■■□□□ 1.41
GCN1-207ENST00000550471 TFRCP02786 760 aaKnown RBP23.88■■□□□ 1.41
GCN1-207ENST00000550471 DYNLL2Q96FJ2 89 aa23.88■■□□□ 1.41
GCN1-207ENST00000550471 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.88■■□□□ 1.41
GCN1-207ENST00000550471 IVNS1ABPQ9Y6Y0 642 aa23.88■■□□□ 1.41
GCN1-207ENST00000550471 FARP2O94887 1054 aaPredicted RBP23.87■■□□□ 1.41
GCN1-207ENST00000550471 SLC34A2O95436 690 aa23.87■■□□□ 1.41
GCN1-207ENST00000550471 MX1P20591 662 aa23.87■■□□□ 1.41
GCN1-207ENST00000550471 Q3C1V9 767 aa23.87■■□□□ 1.41
GCN1-207ENST00000550471 UBE2Q1Q7Z7E8 422 aa23.87■■□□□ 1.41
GCN1-207ENST00000550471 SLC44A5Q8NCS7 719 aa23.87■■□□□ 1.41
GCN1-207ENST00000550471 APBA2Q99767 749 aa23.87■■□□□ 1.41
GCN1-207ENST00000550471 CRISPLD2Q9H0B8 497 aa23.87■■□□□ 1.41
GCN1-207ENST00000550471 VCPKMTQ9H867 229 aa23.87■■□□□ 1.41
GCN1-207ENST00000550471 DOCK3Q8IZD9 2030 aa23.87■■□□□ 1.41
GCN1-207ENST00000550471 SLC15A5A6NIM6 579 aa23.86■■□□□ 1.41
GCN1-207ENST00000550471 SPDYE16A6NNV3 312 aaPredicted RBP23.86■■□□□ 1.41
GCN1-207ENST00000550471 WDR46O15213 610 aaKnown RBP23.86■■□□□ 1.41
GCN1-207ENST00000550471 STRNO43815 780 aa23.86■■□□□ 1.41
GCN1-207ENST00000550471 AKR1B1P15121 316 aa23.86■■□□□ 1.41
GCN1-207ENST00000550471 ZKSCAN1P17029 563 aaPredicted RBP23.86■■□□□ 1.41
GCN1-207ENST00000550471 SLFNL1Q499Z3 407 aa23.86■■□□□ 1.41
GCN1-207ENST00000550471 MORN1Q5T089 497 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms