RNA–Protein interactions for RNA: ENST00000550385.1

CHPT1-206, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 754 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-206ENST00000550385 CALM2P0DP24 149 aa12.44□□□□□ -0.42
CHPT1-206ENST00000550385 CALM3P0DP25 149 aa12.44□□□□□ -0.42
CHPT1-206ENST00000550385 RCAN1P53805 252 aa12.44□□□□□ -0.42
CHPT1-206ENST00000550385 APOBRQ0VD83 1088 aa12.44□□□□□ -0.42
CHPT1-206ENST00000550385 SEC23AQ15436 765 aa12.44□□□□□ -0.42
CHPT1-206ENST00000550385 NBPF12Q5TAG4 269 aaPredicted RBP12.44□□□□□ -0.42
CHPT1-206ENST00000550385 MIGA2Q7L4E1 593 aa12.44□□□□□ -0.42
CHPT1-206ENST00000550385 KRT26Q7Z3Y9 468 aa12.44□□□□□ -0.42
CHPT1-206ENST00000550385 CATIPQ7Z7H3 387 aa12.44□□□□□ -0.42
CHPT1-206ENST00000550385 ZNF341Q9BYN7 854 aa12.44□□□□□ -0.42
CHPT1-206ENST00000550385 DNAJC18Q9H819 358 aa12.44□□□□□ -0.42
CHPT1-206ENST00000550385 KANSL2Q9H9L4 492 aa12.44□□□□□ -0.42
CHPT1-206ENST00000550385 TPCN1Q9ULQ1 816 aa12.44□□□□□ -0.42
CHPT1-206ENST00000550385 PLIN4Q96Q06 1357 aa12.43□□□□□ -0.42
CHPT1-206ENST00000550385 KLF18A0A0U1RQI7 1052 aa12.43□□□□□ -0.42
CHPT1-206ENST00000550385 PPP1R12BO60237 982 aaPredicted RBP12.43□□□□□ -0.42
CHPT1-206ENST00000550385 CTNND1O60716 968 aaKnown RBP12.43□□□□□ -0.42
CHPT1-206ENST00000550385 TTLL1O95922 423 aa12.43□□□□□ -0.42
CHPT1-206ENST00000550385 AKR1B1P15121 316 aa12.43□□□□□ -0.42
CHPT1-206ENST00000550385 NOVP48745 357 aa12.43□□□□□ -0.42
CHPT1-206ENST00000550385 CLCN6P51797 869 aa12.43□□□□□ -0.42
CHPT1-206ENST00000550385 COL9A3Q14050 684 aaPredicted RBP12.43□□□□□ -0.42
CHPT1-206ENST00000550385 ME3Q16798 604 aa12.43□□□□□ -0.42
CHPT1-206ENST00000550385 NOL8Q76FK4 1167 aaKnown RBP12.43□□□□□ -0.42
CHPT1-206ENST00000550385 LDHDQ86WU2 507 aa12.43□□□□□ -0.42
CHPT1-206ENST00000550385 ENAHQ8N8S7 591 aaPredicted RBP12.43□□□□□ -0.42
CHPT1-206ENST00000550385 INTS4Q96HW7 963 aaKnown RBP12.43□□□□□ -0.42
CHPT1-206ENST00000550385 KAT14Q9H8E8 782 aa12.43□□□□□ -0.42
CHPT1-206ENST00000550385 IL17RBQ9NRM6 502 aa12.43□□□□□ -0.42
CHPT1-206ENST00000550385 MTMR4Q9NYA4 1195 aa12.43□□□□□ -0.42
CHPT1-206ENST00000550385 NAP1L2Q9ULW6 460 aaPredicted RBP12.43□□□□□ -0.42
CHPT1-206ENST00000550385 STX8Q9UNK0 236 aa12.43□□□□□ -0.42
CHPT1-206ENST00000550385 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.43□□□□□ -0.42
CHPT1-206ENST00000550385 IGKV6D-41A0A0C4DH26 115 aa12.42□□□□□ -0.42
CHPT1-206ENST00000550385 CCDC196A0A1B0GTZ2 297 aa12.42□□□□□ -0.42
CHPT1-206ENST00000550385 ZBTB43O43298 467 aa12.42□□□□□ -0.42
CHPT1-206ENST00000550385 PFKFB2O60825 505 aa12.42□□□□□ -0.42
CHPT1-206ENST00000550385 ASNSP08243 561 aa12.42□□□□□ -0.42
CHPT1-206ENST00000550385 TOP1P11387 765 aaKnown RBP12.42□□□□□ -0.42
CHPT1-206ENST00000550385 PDIA3P30101 505 aaKnown RBP12.42□□□□□ -0.42
CHPT1-206ENST00000550385 CAP2P40123 477 aa12.42□□□□□ -0.42
CHPT1-206ENST00000550385 CUL4AQ13619 759 aa12.42□□□□□ -0.42
CHPT1-206ENST00000550385 CPLX2Q6PUV4 134 aaKnown RBP12.42□□□□□ -0.42
CHPT1-206ENST00000550385 USP48Q86UV5 1035 aa12.42□□□□□ -0.42
CHPT1-206ENST00000550385 NKX2-3Q8TAU0 364 aa12.42□□□□□ -0.42
CHPT1-206ENST00000550385 MKL1Q969V6 931 aa12.42□□□□□ -0.42
CHPT1-206ENST00000550385 MAP3K14Q99558 947 aa12.42□□□□□ -0.42
CHPT1-206ENST00000550385 LARP6Q9BRS8 491 aaKnown RBP12.42□□□□□ -0.42
CHPT1-206ENST00000550385 NYAP2Q9P242 653 aa12.42□□□□□ -0.42
CHPT1-206ENST00000550385 ZNF112Q9UJU3 913 aa12.42□□□□□ -0.42
CHPT1-206ENST00000550385 SCAF8Q9UPN6 1271 aaKnown RBP12.42□□□□□ -0.42
CHPT1-206ENST00000550385 FAM196BA6NMK8 535 aa12.41□□□□□ -0.42
CHPT1-206ENST00000550385 PHF20L1A8MW92 1017 aa12.41□□□□□ -0.42
CHPT1-206ENST00000550385 NMT2O60551 498 aa12.41□□□□□ -0.42
CHPT1-206ENST00000550385 DDAH1O94760 285 aa12.41□□□□□ -0.42
CHPT1-206ENST00000550385 METAP2P50579 478 aaKnown RBP eCLIP12.41□□□□□ -0.421e-6■■■■■ 27.4
CHPT1-206ENST00000550385 APOA5Q6Q788 366 aa12.41□□□□□ -0.42
CHPT1-206ENST00000550385 ZNF654Q8IZM8 581 aa12.41□□□□□ -0.42
CHPT1-206ENST00000550385 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
CHPT1-206ENST00000550385 CEP95Q96GE4 821 aa12.41□□□□□ -0.42
CHPT1-206ENST00000550385 LLPHQ9BRT6 129 aaKnown RBP12.41□□□□□ -0.42
CHPT1-206ENST00000550385 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.41□□□□□ -0.42
CHPT1-206ENST00000550385 CWC22Q9HCG8 908 aaKnown RBP12.41□□□□□ -0.42
CHPT1-206ENST00000550385 GPHNQ9NQX3 736 aaPredicted RBP12.41□□□□□ -0.42
CHPT1-206ENST00000550385 BRPF3Q9ULD4 1205 aa12.41□□□□□ -0.42
CHPT1-206ENST00000550385 SYNPO2Q9UMS6 1093 aa12.41□□□□□ -0.42
CHPT1-206ENST00000550385 GOLGA8BA8MQT2 603 aa12.4□□□□□ -0.42
CHPT1-206ENST00000550385 GH2P01242 217 aa12.4□□□□□ -0.42
CHPT1-206ENST00000550385 KIF5BP33176 963 aa12.4□□□□□ -0.42
CHPT1-206ENST00000550385 IREB2P48200 963 aaKnown RBP12.4□□□□□ -0.42
CHPT1-206ENST00000550385 GNAQP50148 359 aa12.4□□□□□ -0.42
CHPT1-206ENST00000550385 STK3Q13188 491 aa12.4□□□□□ -0.42
CHPT1-206ENST00000550385 RAB3GAP1Q15042 981 aa12.4□□□□□ -0.42
CHPT1-206ENST00000550385 RCSD1Q6JBY9 416 aa12.4□□□□□ -0.42
CHPT1-206ENST00000550385 CDAN1Q8IWY9 1227 aa12.4□□□□□ -0.42
CHPT1-206ENST00000550385 FANCBQ8NB91 859 aa12.4□□□□□ -0.42
CHPT1-206ENST00000550385 PNMA1Q8ND90 353 aa12.4□□□□□ -0.42
CHPT1-206ENST00000550385 GTF3C6Q969F1 213 aa12.4□□□□□ -0.42
CHPT1-206ENST00000550385 TMEM47Q9BQJ4 181 aa12.4□□□□□ -0.42
CHPT1-206ENST00000550385 SH2D4AQ9H788 454 aa12.4□□□□□ -0.42
CHPT1-206ENST00000550385 ARHGEF10LQ9HCE6 1279 aa12.4□□□□□ -0.42
CHPT1-206ENST00000550385 RBM28Q9NW13 759 aaKnown RBP12.4□□□□□ -0.42
CHPT1-206ENST00000550385 CLIP2Q9UDT6 1046 aa12.4□□□□□ -0.42
CHPT1-206ENST00000550385 UNCXA6NJT0 531 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 GOLGA8AA7E2F4 631 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 ADM5C9JUS6 153 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 CPLX1O14810 134 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 CDKL5O76039 1030 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 GDF11O95390 407 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 PDIA4P13667 645 aaKnown RBP12.39□□□□□ -0.43
CHPT1-206ENST00000550385 ICA1Q05084 483 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 SEPT2Q15019 361 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 PRAMEF18Q5VWM3 479 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 ARMC9Q7Z3E5 817 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 CCDC83Q8IWF9 413 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 CTCFLQ8NI51 663 aaPredicted RBP12.39□□□□□ -0.43
CHPT1-206ENST00000550385 NUP133Q8WUM0 1156 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 KLRG1Q96E93 195 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 CDCA5Q96FF9 252 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 NMRK2Q9NPI5 230 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms