RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 RASA1P20936 1047 aa24.19■■□□□ 1.46
PRDM4-205ENST00000550376 RCAN1P53805 252 aa24.19■■□□□ 1.46
PRDM4-205ENST00000550376 TMX4Q9H1E5 349 aaPredicted RBP24.19■■□□□ 1.46
PRDM4-205ENST00000550376 CPVLQ9H3G5 476 aa24.19■■□□□ 1.46
PRDM4-205ENST00000550376 PCDHB6Q9Y5E3 794 aa24.19■■□□□ 1.46
PRDM4-205ENST00000550376 H0YIN7 160 aa24.18■■□□□ 1.46
PRDM4-205ENST00000550376 CDK8P49336 464 aa24.18■■□□□ 1.46
PRDM4-205ENST00000550376 GRIN1Q05586 938 aa24.18■■□□□ 1.46
PRDM4-205ENST00000550376 DEFB132Q7Z7B7 95 aa24.18■■□□□ 1.46
PRDM4-205ENST00000550376 PNMA1Q8ND90 353 aa24.18■■□□□ 1.46
PRDM4-205ENST00000550376 CAMKK2Q96RR4 588 aa24.18■■□□□ 1.46
PRDM4-205ENST00000550376 CBX8Q9HC52 389 aa24.18■■□□□ 1.46
PRDM4-205ENST00000550376 PRKCSHP14314 528 aaPredicted RBP24.18■■□□□ 1.46
PRDM4-205ENST00000550376 DDX4Q9NQI0 724 aaKnown RBP24.18■■□□□ 1.46
PRDM4-205ENST00000550376 PRPF3O43395 683 aaKnown RBP24.17■■□□□ 1.46
PRDM4-205ENST00000550376 DDAH1O94760 285 aa24.17■■□□□ 1.46
PRDM4-205ENST00000550376 GOLGA8HP0CJ92 632 aa24.17■■□□□ 1.46
PRDM4-205ENST00000550376 PFKFB1P16118 471 aa24.17■■□□□ 1.46
PRDM4-205ENST00000550376 TMED8Q6PL24 325 aaPredicted RBP24.17■■□□□ 1.46
PRDM4-205ENST00000550376 SHC4Q6S5L8 630 aa24.17■■□□□ 1.46
PRDM4-205ENST00000550376 GAKO14976 1311 aa24.17■■□□□ 1.46
PRDM4-205ENST00000550376 A0A1W2PQ27 194 aa24.16■■□□□ 1.46
PRDM4-205ENST00000550376 A0A1W2PQ64 194 aa24.16■■□□□ 1.46
PRDM4-205ENST00000550376 A0A1W2PQD8 194 aa24.16■■□□□ 1.46
PRDM4-205ENST00000550376 CALM1P0DP23 149 aa24.16■■□□□ 1.46
PRDM4-205ENST00000550376 CALM2P0DP24 149 aa24.16■■□□□ 1.46
PRDM4-205ENST00000550376 CALM3P0DP25 149 aa24.16■■□□□ 1.46
PRDM4-205ENST00000550376 FAM163AQ96GL9 167 aaPredicted RBP24.16■■□□□ 1.46
PRDM4-205ENST00000550376 RBM28Q9NW13 759 aaKnown RBP24.16■■□□□ 1.46
PRDM4-205ENST00000550376 CNTNAP5Q8WYK1 1306 aa24.16■■□□□ 1.46
PRDM4-205ENST00000550376 COL11A2P13942 1736 aaPredicted RBP24.16■■□□□ 1.46
PRDM4-205ENST00000550376 UVSSAQ2YD98 709 aa24.16■■□□□ 1.46
PRDM4-205ENST00000550376 C11orf57Q6ZUT1 292 aaPredicted RBP24.16■■□□□ 1.46
PRDM4-205ENST00000550376 FAM200AQ8TCP9 573 aa24.16■■□□□ 1.46
PRDM4-205ENST00000550376 LTBP1Q14766 1721 aa24.15■■□□□ 1.46
PRDM4-205ENST00000550376 WNT7AO00755 349 aa24.15■■□□□ 1.46
PRDM4-205ENST00000550376 ZNF202O95125 648 aa24.15■■□□□ 1.46
PRDM4-205ENST00000550376 HMGB2P26583 209 aaKnown RBP24.15■■□□□ 1.46
PRDM4-205ENST00000550376 CACNB3P54284 484 aa24.15■■□□□ 1.46
PRDM4-205ENST00000550376 KIAA0825Q8IV33 1275 aa24.15■■□□□ 1.46
PRDM4-205ENST00000550376 EYA3Q99504 573 aa24.15■■□□□ 1.46
PRDM4-205ENST00000550376 PPP2R5BQ15173 497 aa24.15■■□□□ 1.46
PRDM4-205ENST00000550376 ISM2Q6H9L7 571 aa24.15■■□□□ 1.46
PRDM4-205ENST00000550376 GPKOWQ92917 476 aaPredicted RBP eCLIP24.14■■□□□ 1.46
PRDM4-205ENST00000550376 ZNF830Q96NB3 372 aaPredicted RBP24.14■■□□□ 1.46
PRDM4-205ENST00000550376 TMEM47Q9BQJ4 181 aa24.14■■□□□ 1.46
PRDM4-205ENST00000550376 FOXP1Q9H334 677 aaPredicted RBP24.14■■□□□ 1.46
PRDM4-205ENST00000550376 USP40Q9NVE5 1235 aa24.14■■□□□ 1.46
PRDM4-205ENST00000550376 BIN1O00499 593 aa24.14■■□□□ 1.45
PRDM4-205ENST00000550376 ZNF165P49910 485 aa24.14■■□□□ 1.45
PRDM4-205ENST00000550376 CLEC10AQ8IUN9 316 aa24.14■■□□□ 1.45
PRDM4-205ENST00000550376 SLF2Q8IX21 1173 aa24.14■■□□□ 1.45
PRDM4-205ENST00000550376 PHF20Q9BVI0 1012 aa24.14■■□□□ 1.45
PRDM4-205ENST00000550376 LAMB1P07942 1786 aa24.14■■□□□ 1.45
PRDM4-205ENST00000550376 PTMAP06454 111 aaKnown RBP24.13■■□□□ 1.45
PRDM4-205ENST00000550376 CMA1P23946 247 aa24.13■■□□□ 1.45
PRDM4-205ENST00000550376 SLC35G1Q2M3R5 365 aa24.13■■□□□ 1.45
PRDM4-205ENST00000550376 DGKHQ86XP1 1220 aa24.13■■□□□ 1.45
PRDM4-205ENST00000550376 STK32BQ9NY57 414 aa24.13■■□□□ 1.45
PRDM4-205ENST00000550376 LRRC37AA6NMS7 1700 aa24.13■■□□□ 1.45
PRDM4-205ENST00000550376 PLCG2P16885 1265 aa24.13■■□□□ 1.45
PRDM4-205ENST00000550376 EIF6P56537 245 aaKnown RBP24.13■■□□□ 1.45
PRDM4-205ENST00000550376 SRCAPQ6ZRS2 3230 aa24.12■■□□□ 1.45
PRDM4-205ENST00000550376 C16orf86Q6ZW13 317 aa24.12■■□□□ 1.45
PRDM4-205ENST00000550376 ZFPM1Q8IX07 1006 aa24.12■■□□□ 1.45
PRDM4-205ENST00000550376 NFIAQ12857 509 aa24.12■■□□□ 1.45
PRDM4-205ENST00000550376 NPY5RQ15761 445 aa24.12■■□□□ 1.45
PRDM4-205ENST00000550376 AOC3Q16853 763 aa24.12■■□□□ 1.45
PRDM4-205ENST00000550376 NRXN2Q9P2S2 1712 aa24.12■■□□□ 1.45
PRDM4-205ENST00000550376 ROBO3Q96MS0 1386 aa24.11■■□□□ 1.45
PRDM4-205ENST00000550376 MAD2L2Q9UI95 211 aa24.11■■□□□ 1.45
PRDM4-205ENST00000550376 CEP95Q96GE4 821 aa24.11■■□□□ 1.45
PRDM4-205ENST00000550376 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.11■■□□□ 1.45
PRDM4-205ENST00000550376 PPP6R2O75170 966 aa24.1■■□□□ 1.45
PRDM4-205ENST00000550376 XBP1P17861 261 aa24.1■■□□□ 1.45
PRDM4-205ENST00000550376 KRT2P35908 639 aa24.1■■□□□ 1.45
PRDM4-205ENST00000550376 CDC42EP5Q6NZY7 148 aa24.1■■□□□ 1.45
PRDM4-205ENST00000550376 RGS22Q8NE09 1264 aa24.1■■□□□ 1.45
PRDM4-205ENST00000550376 C21orf2O43822 256 aa24.1■■□□□ 1.45
PRDM4-205ENST00000550376 SCG2P13521 617 aa24.1■■□□□ 1.45
PRDM4-205ENST00000550376 SYKP43405 635 aa24.1■■□□□ 1.45
PRDM4-205ENST00000550376 TCP10Q12799 353 aa24.1■■□□□ 1.45
PRDM4-205ENST00000550376 APOBEC3HQ6NTF7 200 aaKnown RBP24.1■■□□□ 1.45
PRDM4-205ENST00000550376 SPC24Q8NBT2 197 aa24.1■■□□□ 1.45
PRDM4-205ENST00000550376 SLX4Q8IY92 1834 aa24.1■■□□□ 1.45
PRDM4-205ENST00000550376 MYH6P13533 1939 aa24.09■■□□□ 1.45
PRDM4-205ENST00000550376 CYTH3O43739 400 aa24.09■■□□□ 1.45
PRDM4-205ENST00000550376 RBM5P52756 815 aaKnown RBP eCLIP24.09■■□□□ 1.45
PRDM4-205ENST00000550376 USP17L2Q6R6M4 530 aa24.09■■□□□ 1.45
PRDM4-205ENST00000550376 USP49Q70CQ1 688 aa24.09■■□□□ 1.45
PRDM4-205ENST00000550376 TNS1Q9HBL0 1735 aaKnown RBP24.09■■□□□ 1.45
PRDM4-205ENST00000550376 CTAGE5O15320 804 aa24.09■■□□□ 1.45
PRDM4-205ENST00000550376 ECE2O60344 883 aa24.09■■□□□ 1.45
PRDM4-205ENST00000550376 NLRP5P59047 1200 aa24.09■■□□□ 1.45
PRDM4-205ENST00000550376 RILPL1Q5EBL4 403 aa24.09■■□□□ 1.45
PRDM4-205ENST00000550376 KIF5BP33176 963 aa24.08■■□□□ 1.45
PRDM4-205ENST00000550376 ZNF174Q15697 407 aa24.08■■□□□ 1.45
PRDM4-205ENST00000550376 TYW1BQ6NUM6 668 aa24.08■■□□□ 1.45
PRDM4-205ENST00000550376 JMYQ8N9B5 988 aa24.08■■□□□ 1.45
PRDM4-205ENST00000550376 RASGRP4Q8TDF6 673 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms