RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 PFASO15067 1338 aa15.37■□□□□ 0.05
LETMD1-222ENST00000550274 A0A0G2JMZ2 1700 aa15.37■□□□□ 0.05
LETMD1-222ENST00000550274 ZKSCAN1P17029 563 aaPredicted RBP15.36■□□□□ 0.05
LETMD1-222ENST00000550274 SYN1P17600 705 aa15.36■□□□□ 0.05
LETMD1-222ENST00000550274 CCND3P30281 292 aaPredicted RBP15.36■□□□□ 0.05
LETMD1-222ENST00000550274 BMP8BP34820 402 aa15.36■□□□□ 0.05
LETMD1-222ENST00000550274 CACNB2Q08289 660 aaPredicted RBP15.36■□□□□ 0.05
LETMD1-222ENST00000550274 PDE3AQ14432 1141 aa15.36■□□□□ 0.05
LETMD1-222ENST00000550274 ZYXQ15942 572 aaKnown RBP15.36■□□□□ 0.05
LETMD1-222ENST00000550274 MORN1Q5T089 497 aa15.36■□□□□ 0.05
LETMD1-222ENST00000550274 TATDN1Q6P1N9 297 aa15.36■□□□□ 0.05
LETMD1-222ENST00000550274 MAGEB6Q8N7X4 407 aa15.36■□□□□ 0.05
LETMD1-222ENST00000550274 ANTXR1Q9H6X2 564 aa15.36■□□□□ 0.05
LETMD1-222ENST00000550274 COL11A1P12107 1806 aaPredicted RBP15.36■□□□□ 0.05
LETMD1-222ENST00000550274 CNMDO75829 334 aa15.35■□□□□ 0.05
LETMD1-222ENST00000550274 USP5P45974 858 aa15.35■□□□□ 0.05
LETMD1-222ENST00000550274 PLEKHH3Q7Z736 793 aa15.35■□□□□ 0.05
LETMD1-222ENST00000550274 ITPRIPQ8IWB1 547 aa15.35■□□□□ 0.05
LETMD1-222ENST00000550274 FTSJ3Q8IY81 847 aaKnown RBP15.35■□□□□ 0.05
LETMD1-222ENST00000550274 C12orf42Q96LP6 360 aa15.35■□□□□ 0.05
LETMD1-222ENST00000550274 FEZ1Q99689 392 aa15.35■□□□□ 0.05
LETMD1-222ENST00000550274 SERPINB13Q9UIV8 391 aa15.35■□□□□ 0.05
LETMD1-222ENST00000550274 ZNF236Q9UL36 1845 aa15.35■□□□□ 0.05
LETMD1-222ENST00000550274 COL6A1P12109 1028 aa15.34■□□□□ 0.05
LETMD1-222ENST00000550274 RGS2P41220 211 aa15.34■□□□□ 0.05
LETMD1-222ENST00000550274 MAGEA10P43363 369 aaPredicted RBP15.34■□□□□ 0.05
LETMD1-222ENST00000550274 LHX8Q68G74 356 aa15.34■□□□□ 0.05
LETMD1-222ENST00000550274 CCAR1Q8IX12 1150 aaKnown RBP15.34■□□□□ 0.05
LETMD1-222ENST00000550274 TRMT44Q8IYL2 757 aaKnown RBP15.34■□□□□ 0.05
LETMD1-222ENST00000550274 ACER1Q8TDN7 264 aa15.34■□□□□ 0.05
LETMD1-222ENST00000550274 GTF3C2Q8WUA4 911 aaPredicted RBP15.34■□□□□ 0.05
LETMD1-222ENST00000550274 APBA2Q99767 749 aa15.34■□□□□ 0.05
LETMD1-222ENST00000550274 EHD4Q9H223 541 aa15.34■□□□□ 0.05
LETMD1-222ENST00000550274 UNC80Q8N2C7 3258 aa15.34■□□□□ 0.05
LETMD1-222ENST00000550274 LTBP2Q14767 1821 aa15.33■□□□□ 0.05
LETMD1-222ENST00000550274 VCAM1P19320 739 aa15.33■□□□□ 0.04
LETMD1-222ENST00000550274 PLCD1P51178 756 aa15.33■□□□□ 0.04
LETMD1-222ENST00000550274 C1QBPQ07021 282 aaKnown RBP15.33■□□□□ 0.04
LETMD1-222ENST00000550274 RAB3GAP1Q15042 981 aa15.33■□□□□ 0.04
LETMD1-222ENST00000550274 CEP85Q6P2H3 762 aa15.33■□□□□ 0.04
LETMD1-222ENST00000550274 EXOC6BQ9Y2D4 811 aa15.33■□□□□ 0.04
LETMD1-222ENST00000550274 RABGAP1Q9Y3P9 1069 aa15.33■□□□□ 0.04
LETMD1-222ENST00000550274 PLXNA1Q9UIW2 1896 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 USP17L15C9J2P7 530 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 USP17L13C9JLJ4 530 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 USP17L11C9JVI0 530 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 USP17L18D6R9N7 530 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 USP17L22D6RA61 530 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 USP17L17D6RBQ6 530 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 USP17L19D6RCP7 530 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 USP17L20D6RJB6 530 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 GUCY1A2P33402 732 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 SHMT1P34896 483 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 EVX2Q03828 476 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 USP17L24Q0WX57 530 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 MAP3K12Q12852 859 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 MAP2K5Q13163 448 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 ABCB5Q2M3G0 1257 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 CERKLQ49MI3 558 aaPredicted RBP15.32■□□□□ 0.04
LETMD1-222ENST00000550274 CATSPERGQ6ZRH7 1159 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 AACSQ86V21 672 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 CERS3Q8IU89 383 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 RIOK1Q9BRS2 568 aaKnown RBP15.32■□□□□ 0.04
LETMD1-222ENST00000550274 KIAA1683Q9H0B3 1180 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 FLRT1Q9NZU1 646 aa15.32■□□□□ 0.04
LETMD1-222ENST00000550274 SMCHD1A6NHR9 2005 aa15.31■□□□□ 0.04
LETMD1-222ENST00000550274 LRRC26Q2I0M4 334 aa15.31■□□□□ 0.04
LETMD1-222ENST00000550274 TTC6Q86TZ1 520 aa15.31■□□□□ 0.04
LETMD1-222ENST00000550274 CWC22Q9HCG8 908 aaKnown RBP15.31■□□□□ 0.04
LETMD1-222ENST00000550274 BTBD7Q9P203 1132 aa15.31■□□□□ 0.04
LETMD1-222ENST00000550274 SPDYE16A6NNV3 312 aaPredicted RBP15.3■□□□□ 0.04
LETMD1-222ENST00000550274 USP14P54578 494 aa15.3■□□□□ 0.04
LETMD1-222ENST00000550274 WDR78Q5VTH9 848 aa15.3■□□□□ 0.04
LETMD1-222ENST00000550274 LBX2Q6XYB7 198 aa15.3■□□□□ 0.04
LETMD1-222ENST00000550274 TDHQ8IZJ6 230 aa15.3■□□□□ 0.04
LETMD1-222ENST00000550274 EDC3Q96F86 508 aaKnown RBP15.3■□□□□ 0.04
LETMD1-222ENST00000550274 RPAP3Q9H6T3 665 aaPredicted RBP15.3■□□□□ 0.04
LETMD1-222ENST00000550274 IL1RAPL2Q9NP60 686 aa15.3■□□□□ 0.04
LETMD1-222ENST00000550274 PTPREP23469 700 aa15.29■□□□□ 0.04
LETMD1-222ENST00000550274 CCNA1P78396 465 aa15.29■□□□□ 0.04
LETMD1-222ENST00000550274 HNRNPUQ00839 825 aaKnown RBP eCLIP15.29■□□□□ 0.04
LETMD1-222ENST00000550274 GABPAQ06546 454 aa15.29■□□□□ 0.04
LETMD1-222ENST00000550274 SEPT2Q15019 361 aa15.29■□□□□ 0.04
LETMD1-222ENST00000550274 LRIT3Q3SXY7 679 aa15.29■□□□□ 0.04
LETMD1-222ENST00000550274 Q7L0L9 218 aa15.29■□□□□ 0.04
LETMD1-222ENST00000550274 SLC17A8Q8NDX2 589 aa15.29■□□□□ 0.04
LETMD1-222ENST00000550274 NPLOC4Q8TAT6 608 aa15.29■□□□□ 0.04
LETMD1-222ENST00000550274 CABP5Q9NP86 173 aa15.29■□□□□ 0.04
LETMD1-222ENST00000550274 MAGEB6P1A0A0J9YX57 407 aa15.28■□□□□ 0.04
LETMD1-222ENST00000550274 A0A1W2PRG0 241 aa15.28■□□□□ 0.04
LETMD1-222ENST00000550274 SLC15A5A6NIM6 579 aa15.28■□□□□ 0.04
LETMD1-222ENST00000550274 GLRX3O76003 335 aaKnown RBP15.28■□□□□ 0.04
LETMD1-222ENST00000550274 PDE6AP16499 860 aa15.28■□□□□ 0.04
LETMD1-222ENST00000550274 GRB14Q14449 540 aa15.28■□□□□ 0.04
LETMD1-222ENST00000550274 GPR153Q6NV75 609 aa15.28■□□□□ 0.04
LETMD1-222ENST00000550274 TMED8Q6PL24 325 aaPredicted RBP15.28■□□□□ 0.04
LETMD1-222ENST00000550274 ERC1Q8IUD2 1116 aa15.28■□□□□ 0.04
LETMD1-222ENST00000550274 DEFB123Q8N688 67 aa15.28■□□□□ 0.04
LETMD1-222ENST00000550274 PANK1Q8TE04 598 aa15.28■□□□□ 0.04
LETMD1-222ENST00000550274 UBE2OQ9C0C9 1292 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms