RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 CTCFP49711 727 aaPredicted RBP14.17□□□□□ -0.14
PFDN5-208ENST00000549995 PDE4BQ07343 736 aa14.17□□□□□ -0.14
PFDN5-208ENST00000549995 SIAH1Q8IUQ4 282 aa14.17□□□□□ -0.14
PFDN5-208ENST00000549995 FAM43AQ8N2R8 423 aa14.17□□□□□ -0.14
PFDN5-208ENST00000549995 ESYT1Q9BSJ8 1104 aa14.17□□□□□ -0.14
PFDN5-208ENST00000549995 BEGAINQ9BUH8 593 aa14.17□□□□□ -0.14
PFDN5-208ENST00000549995 SYNPO2Q9UMS6 1093 aa14.17□□□□□ -0.14
PFDN5-208ENST00000549995 AGTPBP1Q9UPW5 1226 aa14.17□□□□□ -0.14
PFDN5-208ENST00000549995 USP17L10C9JJH3 530 aa14.16□□□□□ -0.14
PFDN5-208ENST00000549995 SPP2Q13103 211 aa14.16□□□□□ -0.14
PFDN5-208ENST00000549995 SEPT2Q15019 361 aa14.16□□□□□ -0.14
PFDN5-208ENST00000549995 NEDD1Q8NHV4 660 aa14.16□□□□□ -0.14
PFDN5-208ENST00000549995 STAG1Q8WVM7 1258 aa14.16□□□□□ -0.14
PFDN5-208ENST00000549995 PRDM10Q9NQV6 1147 aa14.16□□□□□ -0.14
PFDN5-208ENST00000549995 MGAMO43451 1857 aa14.16□□□□□ -0.14
PFDN5-208ENST00000549995 TRIM75PA6NK02 468 aa14.15□□□□□ -0.14
PFDN5-208ENST00000549995 CDC45O75419 566 aa14.15□□□□□ -0.14
PFDN5-208ENST00000549995 TRPA1O75762 1119 aa14.15□□□□□ -0.14
PFDN5-208ENST00000549995 HOXA7P31268 230 aaPredicted RBP14.15□□□□□ -0.14
PFDN5-208ENST00000549995 USP14P54578 494 aa14.15□□□□□ -0.14
PFDN5-208ENST00000549995 MAP4K1Q92918 833 aa14.15□□□□□ -0.14
PFDN5-208ENST00000549995 LSG1Q9H089 658 aaKnown RBP14.15□□□□□ -0.14
PFDN5-208ENST00000549995 KANSL2Q9H9L4 492 aa14.15□□□□□ -0.14
PFDN5-208ENST00000549995 NYAP2Q9P242 653 aa14.15□□□□□ -0.14
PFDN5-208ENST00000549995 CTNNA3Q9UI47 895 aa14.15□□□□□ -0.14
PFDN5-208ENST00000549995 TMX2Q9Y320 296 aa14.15□□□□□ -0.14
PFDN5-208ENST00000549995 A0A1W2PRG0 241 aa14.14□□□□□ -0.15
PFDN5-208ENST00000549995 HMGCS2P54868 508 aa14.14□□□□□ -0.15
PFDN5-208ENST00000549995 ICA1Q05084 483 aa14.14□□□□□ -0.15
PFDN5-208ENST00000549995 CTDSPL2Q05D32 466 aa14.14□□□□□ -0.15
PFDN5-208ENST00000549995 CRHR2Q13324 411 aa14.14□□□□□ -0.15
PFDN5-208ENST00000549995 MTMR2Q13614 643 aa14.14□□□□□ -0.15
PFDN5-208ENST00000549995 RAB3GAP1Q15042 981 aa14.14□□□□□ -0.15
PFDN5-208ENST00000549995 AKNAD1Q5T1N1 836 aa14.14□□□□□ -0.15
PFDN5-208ENST00000549995 USP17L2Q6R6M4 530 aa14.14□□□□□ -0.15
PFDN5-208ENST00000549995 TBC1D10CQ8IV04 446 aa14.14□□□□□ -0.15
PFDN5-208ENST00000549995 ACER1Q8TDN7 264 aa14.14□□□□□ -0.15
PFDN5-208ENST00000549995 MKL1Q969V6 931 aa14.14□□□□□ -0.15
PFDN5-208ENST00000549995 MKNK2Q9HBH9 465 aa14.14□□□□□ -0.15
PFDN5-208ENST00000549995 EMILIN3Q9NT22 766 aa14.14□□□□□ -0.15
PFDN5-208ENST00000549995 CASP8AP2Q9UKL3 1982 aa14.13□□□□□ -0.15
PFDN5-208ENST00000549995 PDHXO00330 501 aa14.13□□□□□ -0.15
PFDN5-208ENST00000549995 TLR2O60603 784 aa14.13□□□□□ -0.15
PFDN5-208ENST00000549995 PTH1RQ03431 593 aa14.13□□□□□ -0.15
PFDN5-208ENST00000549995 TREML2Q5T2D2 321 aa14.13□□□□□ -0.15
PFDN5-208ENST00000549995 R3HDMLQ9H3Y0 253 aa14.13□□□□□ -0.15
PFDN5-208ENST00000549995 RNF41Q9H4P4 317 aaPredicted RBP14.13□□□□□ -0.15
PFDN5-208ENST00000549995 SH2D4AQ9H788 454 aa14.13□□□□□ -0.15
PFDN5-208ENST00000549995 TCP11L1Q9NUJ3 509 aa14.13□□□□□ -0.15
PFDN5-208ENST00000549995 MTMR4Q9NYA4 1195 aa14.13□□□□□ -0.15
PFDN5-208ENST00000549995 U3KPZ7 1027 aaPredicted RBP14.13□□□□□ -0.15
PFDN5-208ENST00000549995 GPR25O00155 361 aa14.12□□□□□ -0.15
PFDN5-208ENST00000549995 ZNF213O14771 459 aa14.12□□□□□ -0.15
PFDN5-208ENST00000549995 EPB41L2O43491 1005 aaKnown RBP14.12□□□□□ -0.15
PFDN5-208ENST00000549995 PRDM1O75626 825 aa14.12□□□□□ -0.15
PFDN5-208ENST00000549995 PABPC4Q13310 644 aaKnown RBP eCLIP14.12□□□□□ -0.152e-12■■■■■ 29.6
PFDN5-208ENST00000549995 TAF1CQ15572 869 aaPredicted RBP14.12□□□□□ -0.15
PFDN5-208ENST00000549995 IMMTQ16891 758 aaKnown RBP14.12□□□□□ -0.15
PFDN5-208ENST00000549995 PPP4R3BQ5MIZ7 849 aa14.12□□□□□ -0.15
PFDN5-208ENST00000549995 C17orf99Q6UX52 265 aa14.12□□□□□ -0.15
PFDN5-208ENST00000549995 ZNF444Q8N0Y2 327 aaPredicted RBP14.12□□□□□ -0.15
PFDN5-208ENST00000549995 LPAR1Q92633 364 aa14.12□□□□□ -0.15
PFDN5-208ENST00000549995 PARK7Q99497 189 aaKnown RBP14.12□□□□□ -0.15
PFDN5-208ENST00000549995 VCPKMTQ9H867 229 aa14.12□□□□□ -0.15
PFDN5-208ENST00000549995 ZFYVE28Q9HCC9 887 aa14.12□□□□□ -0.15
PFDN5-208ENST00000549995 ARHGEF10LQ9HCE6 1279 aa14.12□□□□□ -0.15
PFDN5-208ENST00000549995 ZSWIM8A7E2V4 1837 aa14.12□□□□□ -0.15
PFDN5-208ENST00000549995 NEDD4P46934 1319 aa14.12□□□□□ -0.15
PFDN5-208ENST00000549995 MPHOSPH10O00566 681 aaKnown RBP14.11□□□□□ -0.15
PFDN5-208ENST00000549995 CYP21A2P08686 494 aa14.11□□□□□ -0.15
PFDN5-208ENST00000549995 BCRP11274 1271 aa14.11□□□□□ -0.15
PFDN5-208ENST00000549995 EEF2P13639 858 aaKnown RBP14.11□□□□□ -0.15
PFDN5-208ENST00000549995 DGKZQ13574 1117 aa14.11□□□□□ -0.15
PFDN5-208ENST00000549995 LBX2Q6XYB7 198 aa14.11□□□□□ -0.15
PFDN5-208ENST00000549995 GADL1Q6ZQY3 521 aa14.11□□□□□ -0.15
PFDN5-208ENST00000549995 CEP95Q96GE4 821 aa14.11□□□□□ -0.15
PFDN5-208ENST00000549995 IL17RBQ9NRM6 502 aa14.11□□□□□ -0.15
PFDN5-208ENST00000549995 TMOD4Q9NZQ9 345 aa14.11□□□□□ -0.15
PFDN5-208ENST00000549995 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.11□□□□□ -0.15
PFDN5-208ENST00000549995 PNMA3Q9UL41 463 aa14.11□□□□□ -0.15
PFDN5-208ENST00000549995 MYPNQ86TC9 1320 aa14.11□□□□□ -0.15
PFDN5-208ENST00000549995 COL11A1P12107 1806 aaPredicted RBP14.11□□□□□ -0.15
PFDN5-208ENST00000549995 TBC1D8O95759 1140 aa14.1□□□□□ -0.15
PFDN5-208ENST00000549995 TSPY3P0CV98 308 aa14.1□□□□□ -0.15
PFDN5-208ENST00000549995 TSPY8P0CW00 308 aa14.1□□□□□ -0.15
PFDN5-208ENST00000549995 VCAM1P19320 739 aa14.1□□□□□ -0.15
PFDN5-208ENST00000549995 LBX1P52954 281 aa14.1□□□□□ -0.15
PFDN5-208ENST00000549995 HAND2P61296 217 aa14.1□□□□□ -0.15
PFDN5-208ENST00000549995 TFAP4Q01664 338 aa14.1□□□□□ -0.15
PFDN5-208ENST00000549995 NECTIN1Q15223 517 aa14.1□□□□□ -0.15
PFDN5-208ENST00000549995 CASC1Q6TDU7 716 aa14.1□□□□□ -0.15
PFDN5-208ENST00000549995 MFSD6Q6ZSS7 791 aa14.1□□□□□ -0.15
PFDN5-208ENST00000549995 CLEC10AQ8IUN9 316 aa14.1□□□□□ -0.15
PFDN5-208ENST00000549995 PIAS4Q8N2W9 510 aaPredicted RBP14.1□□□□□ -0.15
PFDN5-208ENST00000549995 GMCL1P1Q8NEA9 526 aa14.1□□□□□ -0.15
PFDN5-208ENST00000549995 NKX2-3Q8TAU0 364 aa14.1□□□□□ -0.15
PFDN5-208ENST00000549995 INCENPQ9NQS7 918 aa14.1□□□□□ -0.15
PFDN5-208ENST00000549995 RBM8AQ9Y5S9 174 aaKnown RBP14.1□□□□□ -0.15
PFDN5-208ENST00000549995 ZNF236Q9UL36 1845 aa14.09□□□□□ -0.15
PFDN5-208ENST00000549995 WDR46O15213 610 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms