RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 GPRC5AQ8NFJ5 357 aa29.04■■■□□ 2.24
USP44-205ENST00000549639 SLC4A4Q9Y6R1 1079 aa29.04■■■□□ 2.24
USP44-205ENST00000549639 CAPN2P17655 700 aa29.03■■■□□ 2.24
USP44-205ENST00000549639 AAMPQ13685 434 aa29.03■■■□□ 2.24
USP44-205ENST00000549639 C12orf60Q5U649 245 aa29.03■■■□□ 2.24
USP44-205ENST00000549639 TMEM179Q6ZVK1 233 aa29.03■■■□□ 2.24
USP44-205ENST00000549639 PUS7LQ9H0K6 701 aaKnown RBP29.03■■■□□ 2.24
USP44-205ENST00000549639 MPHOSPH10O00566 681 aaKnown RBP29.02■■■□□ 2.24
USP44-205ENST00000549639 GUCY1A2P33402 732 aa29.02■■■□□ 2.24
USP44-205ENST00000549639 MTFR1Q15390 333 aa29.02■■■□□ 2.24
USP44-205ENST00000549639 CCDC17Q96LX7 622 aa29.02■■■□□ 2.24
USP44-205ENST00000549639 GJB1P08034 283 aa29.01■■■□□ 2.23
USP44-205ENST00000549639 CYP2D6P10635 497 aa29.01■■■□□ 2.23
USP44-205ENST00000549639 CCL5P13501 91 aa29.01■■■□□ 2.23
USP44-205ENST00000549639 SEPT2Q15019 361 aa29.01■■■□□ 2.23
USP44-205ENST00000549639 ACER1Q8TDN7 264 aa29.01■■■□□ 2.23
USP44-205ENST00000549639 YTHDC1Q96MU7 727 aaKnown RBP29.01■■■□□ 2.23
USP44-205ENST00000549639 ZBTB47Q9UFB7 747 aaPredicted RBP29.01■■■□□ 2.23
USP44-205ENST00000549639 USP17L12C9JPN9 530 aa29■■■□□ 2.23
USP44-205ENST00000549639 USP17L21D6R901 530 aa29■■■□□ 2.23
USP44-205ENST00000549639 RNF113AO15541 343 aaKnown RBP29■■■□□ 2.23
USP44-205ENST00000549639 GLRX3O76003 335 aaKnown RBP29■■■□□ 2.23
USP44-205ENST00000549639 ZYXQ15942 572 aaKnown RBP29■■■□□ 2.23
USP44-205ENST00000549639 GIMAP6Q6P9H5 292 aa29■■■□□ 2.23
USP44-205ENST00000549639 CATSPERGQ6ZRH7 1159 aa29■■■□□ 2.23
USP44-205ENST00000549639 APPBP2Q92624 585 aa29■■■□□ 2.23
USP44-205ENST00000549639 CRBNQ96SW2 442 aa29■■■□□ 2.23
USP44-205ENST00000549639 RNF208Q9H0X6 261 aa29■■■□□ 2.23
USP44-205ENST00000549639 RBPJLQ9UBG7 517 aa29■■■□□ 2.23
USP44-205ENST00000549639 ARPP21Q9UBL0 812 aaPredicted RBP29■■■□□ 2.23
USP44-205ENST00000549639 MKI67P46013 3256 aaKnown RBP29■■■□□ 2.23
USP44-205ENST00000549639 CHGBP05060 677 aa28.99■■■□□ 2.23
USP44-205ENST00000549639 VCAM1P19320 739 aa28.99■■■□□ 2.23
USP44-205ENST00000549639 MAPK4P31152 587 aa28.99■■■□□ 2.23
USP44-205ENST00000549639 EVX2Q03828 476 aa28.99■■■□□ 2.23
USP44-205ENST00000549639 STRBPQ96SI9 672 aaKnown RBP28.99■■■□□ 2.23
USP44-205ENST00000549639 GJA8P48165 433 aa28.98■■■□□ 2.23
USP44-205ENST00000549639 ERVK-9P63128 1117 aa28.98■■■□□ 2.23
USP44-205ENST00000549639 ERVK-24P63145 666 aa28.98■■■□□ 2.23
USP44-205ENST00000549639 TSHZ3Q63HK5 1081 aa28.98■■■□□ 2.23
USP44-205ENST00000549639 C16orf86Q6ZW13 317 aa28.98■■■□□ 2.23
USP44-205ENST00000549639 GCC1Q96CN9 775 aa28.98■■■□□ 2.23
USP44-205ENST00000549639 DYNLL2Q96FJ2 89 aa28.98■■■□□ 2.23
USP44-205ENST00000549639 SH2D4AQ9H788 454 aa28.98■■■□□ 2.23
USP44-205ENST00000549639 TXNRD2Q9NNW7 524 aa28.98■■■□□ 2.23
USP44-205ENST00000549639 GJD2Q9UKL4 321 aa28.98■■■□□ 2.23
USP44-205ENST00000549639 RABGAP1Q9Y3P9 1069 aa28.98■■■□□ 2.23
USP44-205ENST00000549639 DOCK3Q8IZD9 2030 aa28.98■■■□□ 2.23
USP44-205ENST00000549639 BAZ2AQ9UIF9 1905 aaKnown RBP28.97■■■□□ 2.23
USP44-205ENST00000549639 INHAP05111 366 aa28.97■■■□□ 2.23
USP44-205ENST00000549639 ELNP15502 786 aa28.97■■■□□ 2.23
USP44-205ENST00000549639 GNAT2P19087 354 aa28.97■■■□□ 2.23
USP44-205ENST00000549639 CDK8P49336 464 aa28.97■■■□□ 2.23
USP44-205ENST00000549639 HDAC1Q13547 482 aaPredicted RBP28.97■■■□□ 2.23
USP44-205ENST00000549639 CTR9Q6PD62 1173 aa28.97■■■□□ 2.23
USP44-205ENST00000549639 LBX2Q6XYB7 198 aa28.97■■■□□ 2.23
USP44-205ENST00000549639 CCAR1Q8IX12 1150 aaKnown RBP28.97■■■□□ 2.23
USP44-205ENST00000549639 SLC44A5Q8NCS7 719 aa28.97■■■□□ 2.23
USP44-205ENST00000549639 CCNA1P78396 465 aa28.96■■■□□ 2.23
USP44-205ENST00000549639 PI4K2BQ8TCG2 481 aa28.96■■■□□ 2.23
USP44-205ENST00000549639 SOCS4Q8WXH5 440 aa28.96■■■□□ 2.23
USP44-205ENST00000549639 ARHGEF10LQ9HCE6 1279 aa28.96■■■□□ 2.23
USP44-205ENST00000549639 MYH8P13535 1937 aa28.96■■■□□ 2.23
USP44-205ENST00000549639 MX1P20591 662 aa28.95■■■□□ 2.22
USP44-205ENST00000549639 SBK1Q52WX2 424 aa28.95■■■□□ 2.22
USP44-205ENST00000549639 OSBP2Q969R2 916 aa28.95■■■□□ 2.22
USP44-205ENST00000549639 NUDT12Q9BQG2 462 aa28.95■■■□□ 2.22
USP44-205ENST00000549639 PAGR1Q9BTK6 254 aa28.95■■■□□ 2.22
USP44-205ENST00000549639 LPAR1Q92633 364 aa28.94■■■□□ 2.22
USP44-205ENST00000549639 UNC93B1Q9H1C4 597 aa28.94■■■□□ 2.22
USP44-205ENST00000549639 RPAP3Q9H6T3 665 aaPredicted RBP28.94■■■□□ 2.22
USP44-205ENST00000549639 CYP2D7A0A087X1C5 515 aa28.93■■■□□ 2.22
USP44-205ENST00000549639 A0A1W2PRG0 241 aa28.93■■■□□ 2.22
USP44-205ENST00000549639 HMGCRP04035 888 aa28.93■■■□□ 2.22
USP44-205ENST00000549639 XRCC5P13010 732 aaKnown RBP28.93■■■□□ 2.22
USP44-205ENST00000549639 AKR1B1P15121 316 aa28.93■■■□□ 2.22
USP44-205ENST00000549639 ICA1Q05084 483 aa28.93■■■□□ 2.22
USP44-205ENST00000549639 Q3C1V9 767 aa28.93■■■□□ 2.22
USP44-205ENST00000549639 TRMT44Q8IYL2 757 aaKnown RBP28.93■■■□□ 2.22
USP44-205ENST00000549639 SHISA4Q96DD7 197 aa28.93■■■□□ 2.22
USP44-205ENST00000549639 HOXC10Q9NYD6 342 aa28.93■■■□□ 2.22
USP44-205ENST00000549639 GSG1L2A8MUP6 293 aa28.92■■■□□ 2.22
USP44-205ENST00000549639 GPAA1O43292 621 aa28.92■■■□□ 2.22
USP44-205ENST00000549639 ANKRD45Q5TZF3 282 aa28.92■■■□□ 2.22
USP44-205ENST00000549639 U2AF1L4Q8WU68 220 aaKnown RBP28.92■■■□□ 2.22
USP44-205ENST00000549639 TMX2Q9Y320 296 aa28.92■■■□□ 2.22
USP44-205ENST00000549639 SGPL1O95470 568 aa28.91■■■□□ 2.22
USP44-205ENST00000549639 COG2Q14746 738 aa28.91■■■□□ 2.22
USP44-205ENST00000549639 POTEEQ6S8J3 1075 aa28.91■■■□□ 2.22
USP44-205ENST00000549639 PLEKHH3Q7Z736 793 aa28.91■■■□□ 2.22
USP44-205ENST00000549639 KANSL2Q9H9L4 492 aa28.91■■■□□ 2.22
USP44-205ENST00000549639 GPR142Q7Z601 462 aa28.9■■■□□ 2.22
USP44-205ENST00000549639 OTUD7AQ8TE49 926 aaPredicted RBP28.9■■■□□ 2.22
USP44-205ENST00000549639 FSD1Q9BTV5 496 aa28.9■■■□□ 2.22
USP44-205ENST00000549639 PORCNQ9H237 461 aa28.9■■■□□ 2.22
USP44-205ENST00000549639 CWC22Q9HCG8 908 aaKnown RBP28.9■■■□□ 2.22
USP44-205ENST00000549639 PAK6Q9NQU5 681 aaPredicted RBP28.9■■■□□ 2.22
USP44-205ENST00000549639 SALL3Q9BXA9 1300 aa28.9■■■□□ 2.22
USP44-205ENST00000549639 SPDYE16A6NNV3 312 aaPredicted RBP28.89■■■□□ 2.22
USP44-205ENST00000549639 PEX10O60683 326 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms