RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 CHAF1AQ13111 956 aaPredicted RBP11.52□□□□□ -0.57
RAB5B-206ENST00000549505 SAFBQ15424 915 aaKnown RBP eCLIP11.52□□□□□ -0.57
RAB5B-206ENST00000549505 CC2D2BQ6DHV5 1058 aa11.52□□□□□ -0.57
RAB5B-206ENST00000549505 SHC4Q6S5L8 630 aa11.52□□□□□ -0.57
RAB5B-206ENST00000549505 METTL16Q86W50 562 aaKnown RBP11.52□□□□□ -0.57
RAB5B-206ENST00000549505 CAMKK2Q96RR4 588 aa11.52□□□□□ -0.57
RAB5B-206ENST00000549505 CBX8Q9HC52 389 aa11.52□□□□□ -0.57
RAB5B-206ENST00000549505 CEP131Q9UPN4 1083 aa11.52□□□□□ -0.57
RAB5B-206ENST00000549505 AP5Z1O43299 807 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 CYP2D6P10635 497 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 RXRBP28702 533 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 BTDP43251 543 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 ME1P48163 572 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 DIS3L2Q8IYB7 885 aaKnown RBP11.51□□□□□ -0.57
RAB5B-206ENST00000549505 SRBD1Q8N5C6 995 aaKnown RBP11.51□□□□□ -0.57
RAB5B-206ENST00000549505 TRIM44Q96DX7 344 aaPredicted RBP11.51□□□□□ -0.57
RAB5B-206ENST00000549505 SPZ1Q9BXG8 430 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 GJB4Q9NTQ9 266 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 KIAA1468Q9P260 1216 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 NAP1L2Q9ULW6 460 aaPredicted RBP11.51□□□□□ -0.57
RAB5B-206ENST00000549505 KINO60870 393 aaKnown RBP11.51□□□□□ -0.57
RAB5B-206ENST00000549505 USP17L8P0C7I0 530 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 SASS6Q6UVJ0 657 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 PODNQ7Z5L7 613 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 SLC51AQ86UW1 340 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 AMOTL1Q8IY63 956 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 SPATA20Q8TB22 786 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 EYA3Q99504 573 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 VPS33BQ9H267 617 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 ANO10Q9NW15 660 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 MCM9Q9NXL9 1143 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 SNHG28P0DPA3 235 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 RXRAP19793 462 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 RRP12Q5JTH9 1297 aaKnown RBP11.51□□□□□ -0.57
RAB5B-206ENST00000549505 ZKSCAN3Q9BRR0 538 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 MAD2L2Q9UI95 211 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 DAGLAQ9Y4D2 1042 aa11.51□□□□□ -0.57
RAB5B-206ENST00000549505 hCG_1984214I3L0E3 225 aa11.5□□□□□ -0.57
RAB5B-206ENST00000549505 PFKFB1P16118 471 aa11.5□□□□□ -0.57
RAB5B-206ENST00000549505 TERF1P54274 439 aa11.5□□□□□ -0.57
RAB5B-206ENST00000549505 ORC2Q13416 577 aaPredicted RBP11.5□□□□□ -0.57
RAB5B-206ENST00000549505 ZNF713Q8N859 430 aaPredicted RBP11.5□□□□□ -0.57
RAB5B-206ENST00000549505 KRI1Q8N9T8 703 aaKnown RBP11.5□□□□□ -0.57
RAB5B-206ENST00000549505 PARP3Q9Y6F1 533 aa11.5□□□□□ -0.57
RAB5B-206ENST00000549505 ZNF202O95125 648 aa11.5□□□□□ -0.57
RAB5B-206ENST00000549505 APBA3O96018 575 aa11.5□□□□□ -0.57
RAB5B-206ENST00000549505 POLR3DP05423 398 aaPredicted RBP11.5□□□□□ -0.57
RAB5B-206ENST00000549505 KRT2P35908 639 aa11.5□□□□□ -0.57
RAB5B-206ENST00000549505 SEMA3FQ13275 785 aa11.5□□□□□ -0.57
RAB5B-206ENST00000549505 ANO6Q4KMQ2 910 aa11.5□□□□□ -0.57
RAB5B-206ENST00000549505 MPNDQ8N594 471 aa11.5□□□□□ -0.57
RAB5B-206ENST00000549505 SWAP70Q9UH65 585 aa11.5□□□□□ -0.57
RAB5B-206ENST00000549505 BTBD18B2RXH4 712 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 IKBKBO14920 756 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 NPHP1O15259 732 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 PLEKHA8P1O95397 391 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 ADCY5O95622 1261 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 SCG2P13521 617 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 SARSP49591 514 aaKnown RBP11.49□□□□□ -0.57
RAB5B-206ENST00000549505 HSP90AA2PQ14568 343 aaPredicted RBP11.49□□□□□ -0.57
RAB5B-206ENST00000549505 MFSD14BQ5SR56 506 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 DHX40Q8IX18 779 aaKnown RBP11.49□□□□□ -0.57
RAB5B-206ENST00000549505 CTCFLQ8NI51 663 aaPredicted RBP11.49□□□□□ -0.57
RAB5B-206ENST00000549505 FERMT2Q96AC1 680 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 MRFAP1L1Q96HT8 127 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 SLX4Q8IY92 1834 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 USP5P45974 858 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 NLRP12P59046 1061 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 EVX2Q03828 476 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 PPP4R3BQ5MIZ7 849 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 RAB11FIP4Q86YS3 637 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 CERS5Q8N5B7 392 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 ZDHHC15Q96MV8 337 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 RGS17Q9UGC6 210 aaPredicted RBP11.49□□□□□ -0.57
RAB5B-206ENST00000549505 SYNPO2Q9UMS6 1093 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 ADAMTSL1Q8N6G6 1762 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 ESYT2A0FGR8 921 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 CALML3P27482 149 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 CDK8P49336 464 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 PLCD1P51178 756 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 TFAP4Q01664 338 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 DIXDC1Q155Q3 683 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 SH3RF1Q7Z6J0 888 aa11.49□□□□□ -0.57
RAB5B-206ENST00000549505 ATRNL1Q5VV63 1379 aa11.48□□□□□ -0.57
RAB5B-206ENST00000549505 UBE2Q2LH0YL09 131 aa11.48□□□□□ -0.57
RAB5B-206ENST00000549505 STRIP1Q5VSL9 837 aa11.48□□□□□ -0.57
RAB5B-206ENST00000549505 TEX2Q8IWB9 1127 aa11.48□□□□□ -0.57
RAB5B-206ENST00000549505 RNF214Q8ND24 703 aa11.48□□□□□ -0.57
RAB5B-206ENST00000549505 IDI2Q9BXS1 227 aa11.48□□□□□ -0.57
RAB5B-206ENST00000549505 TSPY2A6NKD2 308 aa11.48□□□□□ -0.57
RAB5B-206ENST00000549505 MMP10P09238 476 aa11.48□□□□□ -0.57
RAB5B-206ENST00000549505 CAMK4Q16566 473 aa11.48□□□□□ -0.57
RAB5B-206ENST00000549505 SLC35G1Q2M3R5 365 aa11.48□□□□□ -0.57
RAB5B-206ENST00000549505 ARL6IP4Q66PJ3 421 aaKnown RBP11.48□□□□□ -0.57
RAB5B-206ENST00000549505 CCDC144CPQ8IYA2 1237 aa11.48□□□□□ -0.57
RAB5B-206ENST00000549505 TRIML1Q8N9V2 468 aa11.48□□□□□ -0.57
RAB5B-206ENST00000549505 TGFBRAP1Q8WUH2 860 aa11.48□□□□□ -0.57
RAB5B-206ENST00000549505 KCND1Q9NSA2 647 aa11.48□□□□□ -0.57
RAB5B-206ENST00000549505 ZNF165P49910 485 aa11.47□□□□□ -0.57
RAB5B-206ENST00000549505 ATP2C1P98194 919 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms