RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 USP17L18D6R9N7 530 aa22.43■■□□□ 1.18
CHMP1A-207ENST00000549328 USP17L22D6RA61 530 aa22.43■■□□□ 1.18
CHMP1A-207ENST00000549328 USP17L17D6RBQ6 530 aa22.43■■□□□ 1.18
CHMP1A-207ENST00000549328 USP17L19D6RCP7 530 aa22.43■■□□□ 1.18
CHMP1A-207ENST00000549328 USP17L20D6RJB6 530 aa22.43■■□□□ 1.18
CHMP1A-207ENST00000549328 ERC2O15083 957 aa22.43■■□□□ 1.18
CHMP1A-207ENST00000549328 ZFYP08048 801 aaPredicted RBP22.43■■□□□ 1.18
CHMP1A-207ENST00000549328 CYP2D6P10635 497 aa22.43■■□□□ 1.18
CHMP1A-207ENST00000549328 USP17L24Q0WX57 530 aa22.43■■□□□ 1.18
CHMP1A-207ENST00000549328 SEPT2Q15019 361 aa22.43■■□□□ 1.18
CHMP1A-207ENST00000549328 GPRC5AQ8NFJ5 357 aa22.43■■□□□ 1.18
CHMP1A-207ENST00000549328 ACER1Q8TDN7 264 aa22.43■■□□□ 1.18
CHMP1A-207ENST00000549328 DOCK3Q8IZD9 2030 aa22.43■■□□□ 1.18
CHMP1A-207ENST00000549328 AAMPQ13685 434 aa22.42■■□□□ 1.18
CHMP1A-207ENST00000549328 LRRFIP1Q32MZ4 808 aaKnown RBP22.42■■□□□ 1.18
CHMP1A-207ENST00000549328 PRPF38BQ5VTL8 546 aaKnown RBP22.42■■□□□ 1.18
CHMP1A-207ENST00000549328 TSHZ3Q63HK5 1081 aa22.42■■□□□ 1.18
CHMP1A-207ENST00000549328 TMEM179Q6ZVK1 233 aa22.42■■□□□ 1.18
CHMP1A-207ENST00000549328 NKX2-3Q8TAU0 364 aa22.42■■□□□ 1.18
CHMP1A-207ENST00000549328 APPBP2Q92624 585 aa22.42■■□□□ 1.18
CHMP1A-207ENST00000549328 CCDC17Q96LX7 622 aa22.42■■□□□ 1.18
CHMP1A-207ENST00000549328 STRBPQ96SI9 672 aaKnown RBP22.42■■□□□ 1.18
CHMP1A-207ENST00000549328 RBPJLQ9UBG7 517 aa22.42■■□□□ 1.18
CHMP1A-207ENST00000549328 MKI67P46013 3256 aaKnown RBP22.42■■□□□ 1.18
CHMP1A-207ENST00000549328 MPHOSPH10O00566 681 aaKnown RBP22.41■■□□□ 1.18
CHMP1A-207ENST00000549328 RNF113AO15541 343 aaKnown RBP22.41■■□□□ 1.18
CHMP1A-207ENST00000549328 GJB1P08034 283 aa22.41■■□□□ 1.18
CHMP1A-207ENST00000549328 CCL5P13501 91 aa22.41■■□□□ 1.18
CHMP1A-207ENST00000549328 ZYXQ15942 572 aaKnown RBP22.41■■□□□ 1.18
CHMP1A-207ENST00000549328 SLC44A5Q8NCS7 719 aa22.41■■□□□ 1.18
CHMP1A-207ENST00000549328 DYNLL2Q96FJ2 89 aa22.41■■□□□ 1.18
CHMP1A-207ENST00000549328 TXNRD2Q9NNW7 524 aa22.41■■□□□ 1.18
CHMP1A-207ENST00000549328 GJD2Q9UKL4 321 aa22.41■■□□□ 1.18
CHMP1A-207ENST00000549328 BAZ2AQ9UIF9 1905 aaKnown RBP22.4■■□□□ 1.18
CHMP1A-207ENST00000549328 GLRX3O76003 335 aaKnown RBP22.4■■□□□ 1.18
CHMP1A-207ENST00000549328 VCAM1P19320 739 aa22.4■■□□□ 1.18
CHMP1A-207ENST00000549328 GIMAP6Q6P9H5 292 aa22.4■■□□□ 1.18
CHMP1A-207ENST00000549328 CTR9Q6PD62 1173 aa22.4■■□□□ 1.18
CHMP1A-207ENST00000549328 CATSPERGQ6ZRH7 1159 aa22.4■■□□□ 1.18
CHMP1A-207ENST00000549328 C16orf86Q6ZW13 317 aa22.4■■□□□ 1.18
CHMP1A-207ENST00000549328 PI4K2BQ8TCG2 481 aa22.4■■□□□ 1.18
CHMP1A-207ENST00000549328 RNF208Q9H0X6 261 aa22.4■■□□□ 1.18
CHMP1A-207ENST00000549328 ELNP15502 786 aa22.39■■□□□ 1.17
CHMP1A-207ENST00000549328 GJA8P48165 433 aa22.39■■□□□ 1.17
CHMP1A-207ENST00000549328 CDK8P49336 464 aa22.39■■□□□ 1.17
CHMP1A-207ENST00000549328 ERVK-9P63128 1117 aa22.39■■□□□ 1.17
CHMP1A-207ENST00000549328 ERVK-24P63145 666 aa22.39■■□□□ 1.17
CHMP1A-207ENST00000549328 HDAC1Q13547 482 aaPredicted RBP22.39■■□□□ 1.17
CHMP1A-207ENST00000549328 OSBP2Q969R2 916 aa22.39■■□□□ 1.17
CHMP1A-207ENST00000549328 GCC1Q96CN9 775 aa22.39■■□□□ 1.17
CHMP1A-207ENST00000549328 ARPP21Q9UBL0 812 aaPredicted RBP22.39■■□□□ 1.17
CHMP1A-207ENST00000549328 ZBTB47Q9UFB7 747 aaPredicted RBP22.39■■□□□ 1.17
CHMP1A-207ENST00000549328 RABGAP1Q9Y3P9 1069 aa22.39■■□□□ 1.17
CHMP1A-207ENST00000549328 CYP2D7A0A087X1C5 515 aa22.38■■□□□ 1.17
CHMP1A-207ENST00000549328 A0A1W2PRG0 241 aa22.38■■□□□ 1.17
CHMP1A-207ENST00000549328 CAPN2P17655 700 aa22.38■■□□□ 1.17
CHMP1A-207ENST00000549328 MX1P20591 662 aa22.38■■□□□ 1.17
CHMP1A-207ENST00000549328 MAPK4P31152 587 aa22.38■■□□□ 1.17
CHMP1A-207ENST00000549328 SBK1Q52WX2 424 aa22.38■■□□□ 1.17
CHMP1A-207ENST00000549328 LBX2Q6XYB7 198 aa22.38■■□□□ 1.17
CHMP1A-207ENST00000549328 GSG1L2A8MUP6 293 aa22.37■■□□□ 1.17
CHMP1A-207ENST00000549328 INHAP05111 366 aa22.37■■□□□ 1.17
CHMP1A-207ENST00000549328 GNAT2P19087 354 aa22.37■■□□□ 1.17
CHMP1A-207ENST00000549328 Q3C1V9 767 aa22.37■■□□□ 1.17
CHMP1A-207ENST00000549328 POTEEQ6S8J3 1075 aa22.37■■□□□ 1.17
CHMP1A-207ENST00000549328 OTUD7AQ8TE49 926 aaPredicted RBP22.37■■□□□ 1.17
CHMP1A-207ENST00000549328 PEX10O60683 326 aa22.36■■□□□ 1.17
CHMP1A-207ENST00000549328 AKR1B1P15121 316 aa22.36■■□□□ 1.17
CHMP1A-207ENST00000549328 ANKRD45Q5TZF3 282 aa22.36■■□□□ 1.17
CHMP1A-207ENST00000549328 CCAR1Q8IX12 1150 aaKnown RBP22.36■■□□□ 1.17
CHMP1A-207ENST00000549328 SHISA4Q96DD7 197 aa22.36■■□□□ 1.17
CHMP1A-207ENST00000549328 PAGR1Q9BTK6 254 aa22.36■■□□□ 1.17
CHMP1A-207ENST00000549328 UNC93B1Q9H1C4 597 aa22.36■■□□□ 1.17
CHMP1A-207ENST00000549328 RPAP3Q9H6T3 665 aaPredicted RBP22.36■■□□□ 1.17
CHMP1A-207ENST00000549328 SH2D4AQ9H788 454 aa22.36■■□□□ 1.17
CHMP1A-207ENST00000549328 ARHGEF10LQ9HCE6 1279 aa22.36■■□□□ 1.17
CHMP1A-207ENST00000549328 SALL3Q9BXA9 1300 aa22.35■■□□□ 1.17
CHMP1A-207ENST00000549328 SMIM22K7EJ46 135 aa22.35■■□□□ 1.17
CHMP1A-207ENST00000549328 GPAA1O43292 621 aa22.35■■□□□ 1.17
CHMP1A-207ENST00000549328 XRCC5P13010 732 aaKnown RBP22.35■■□□□ 1.17
CHMP1A-207ENST00000549328 CCNA1P78396 465 aa22.35■■□□□ 1.17
CHMP1A-207ENST00000549328 SIAH1Q8IUQ4 282 aa22.35■■□□□ 1.17
CHMP1A-207ENST00000549328 SOCS4Q8WXH5 440 aa22.35■■□□□ 1.17
CHMP1A-207ENST00000549328 LPAR1Q92633 364 aa22.35■■□□□ 1.17
CHMP1A-207ENST00000549328 NUDT12Q9BQG2 462 aa22.35■■□□□ 1.17
CHMP1A-207ENST00000549328 HOXC10Q9NYD6 342 aa22.35■■□□□ 1.17
CHMP1A-207ENST00000549328 TMX2Q9Y320 296 aa22.35■■□□□ 1.17
CHMP1A-207ENST00000549328 MYH8P13535 1937 aa22.35■■□□□ 1.17
CHMP1A-207ENST00000549328 SGPL1O95470 568 aa22.34■■□□□ 1.17
CHMP1A-207ENST00000549328 HMGCRP04035 888 aa22.34■■□□□ 1.17
CHMP1A-207ENST00000549328 ICA1Q05084 483 aa22.34■■□□□ 1.17
CHMP1A-207ENST00000549328 COG2Q14746 738 aa22.34■■□□□ 1.17
CHMP1A-207ENST00000549328 U2AF1L4Q8WU68 220 aaKnown RBP22.34■■□□□ 1.17
CHMP1A-207ENST00000549328 PORCNQ9H237 461 aa22.34■■□□□ 1.17
CHMP1A-207ENST00000549328 KANSL2Q9H9L4 492 aa22.34■■□□□ 1.17
CHMP1A-207ENST00000549328 CNMDO75829 334 aa22.33■■□□□ 1.17
CHMP1A-207ENST00000549328 PLEKHH3Q7Z736 793 aa22.33■■□□□ 1.17
CHMP1A-207ENST00000549328 PAK6Q9NQU5 681 aaPredicted RBP22.33■■□□□ 1.17
CHMP1A-207ENST00000549328 STAP2Q9UGK3 403 aa22.33■■□□□ 1.17
CHMP1A-207ENST00000549328 SPDYE16A6NNV3 312 aaPredicted RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms