RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 DYNLL2Q96FJ2 89 aa23.59■■□□□ 1.37
SLC48A1-207ENST00000549243 GJA8P48165 433 aa23.58■■□□□ 1.37
SLC48A1-207ENST00000549243 UBE3CQ15386 1083 aa23.58■■□□□ 1.37
SLC48A1-207ENST00000549243 GPRC5AQ8NFJ5 357 aa23.58■■□□□ 1.37
SLC48A1-207ENST00000549243 C12orf42Q96LP6 360 aa23.58■■□□□ 1.37
SLC48A1-207ENST00000549243 RBPJLQ9UBG7 517 aa23.58■■□□□ 1.37
SLC48A1-207ENST00000549243 CYP2D7A0A087X1C5 515 aa23.57■■□□□ 1.36
SLC48A1-207ENST00000549243 USP14P54578 494 aa23.57■■□□□ 1.36
SLC48A1-207ENST00000549243 ZSCAN25Q6NSZ9 544 aa23.57■■□□□ 1.36
SLC48A1-207ENST00000549243 KIAA1683Q9H0B3 1180 aa23.57■■□□□ 1.36
SLC48A1-207ENST00000549243 ATP8A2Q9NTI2 1148 aa23.57■■□□□ 1.36
SLC48A1-207ENST00000549243 GJD2Q9UKL4 321 aa23.57■■□□□ 1.36
SLC48A1-207ENST00000549243 PCDHB15Q9Y5E8 787 aa23.57■■□□□ 1.36
SLC48A1-207ENST00000549243 USP17L15C9J2P7 530 aa23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 USP17L13C9JLJ4 530 aa23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 USP17L11C9JVI0 530 aa23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 USP17L18D6R9N7 530 aa23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 USP17L22D6RA61 530 aa23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 USP17L17D6RBQ6 530 aa23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 USP17L19D6RCP7 530 aa23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 USP17L20D6RJB6 530 aa23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 SMIM22K7EJ46 135 aa23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 VCAM1P19320 739 aa23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 USP17L24Q0WX57 530 aa23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 Q3C1V9 767 aa23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 POTEEQ6S8J3 1075 aa23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 U2AF1L4Q8WU68 220 aaKnown RBP23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 PUS7LQ9H0K6 701 aaKnown RBP23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 SLC4A4Q9Y6R1 1079 aa23.56■■□□□ 1.36
SLC48A1-207ENST00000549243 RRP1P56182 461 aaKnown RBP23.55■■□□□ 1.36
SLC48A1-207ENST00000549243 ERVK-9P63128 1117 aa23.55■■□□□ 1.36
SLC48A1-207ENST00000549243 ERVK-24P63145 666 aa23.55■■□□□ 1.36
SLC48A1-207ENST00000549243 CCAR1Q8IX12 1150 aaKnown RBP23.55■■□□□ 1.36
SLC48A1-207ENST00000549243 GPATCH3Q96I76 525 aa23.55■■□□□ 1.36
SLC48A1-207ENST00000549243 YTHDC1Q96MU7 727 aaKnown RBP23.55■■□□□ 1.36
SLC48A1-207ENST00000549243 USP17L12C9JPN9 530 aa23.54■■□□□ 1.36
SLC48A1-207ENST00000549243 USP17L21D6R901 530 aa23.54■■□□□ 1.36
SLC48A1-207ENST00000549243 SLC34A2O95436 690 aa23.54■■□□□ 1.36
SLC48A1-207ENST00000549243 CYP2B6P20813 491 aa23.54■■□□□ 1.36
SLC48A1-207ENST00000549243 CATSPERGQ6ZRH7 1159 aa23.54■■□□□ 1.36
SLC48A1-207ENST00000549243 DEFB118Q96PH6 123 aa23.54■■□□□ 1.36
SLC48A1-207ENST00000549243 PORCNQ9H237 461 aa23.54■■□□□ 1.36
SLC48A1-207ENST00000549243 RPAP3Q9H6T3 665 aaPredicted RBP23.54■■□□□ 1.36
SLC48A1-207ENST00000549243 SWAP70Q9UH65 585 aa23.54■■□□□ 1.36
SLC48A1-207ENST00000549243 A0A1W2PRG0 241 aa23.53■■□□□ 1.36
SLC48A1-207ENST00000549243 SGPL1O95470 568 aa23.53■■□□□ 1.36
SLC48A1-207ENST00000549243 AKR1B1P15121 316 aa23.53■■□□□ 1.36
SLC48A1-207ENST00000549243 TRIM32Q13049 653 aa23.53■■□□□ 1.36
SLC48A1-207ENST00000549243 C12orf60Q5U649 245 aa23.53■■□□□ 1.36
SLC48A1-207ENST00000549243 CLEC10AQ8IUN9 316 aa23.53■■□□□ 1.36
SLC48A1-207ENST00000549243 AMOTL1Q8IY63 956 aa23.53■■□□□ 1.36
SLC48A1-207ENST00000549243 GTF3C2Q8WUA4 911 aaPredicted RBP23.53■■□□□ 1.36
SLC48A1-207ENST00000549243 DDRGK1Q96HY6 314 aa23.53■■□□□ 1.36
SLC48A1-207ENST00000549243 HMGCRP04035 888 aa23.52■■□□□ 1.36
SLC48A1-207ENST00000549243 MAPK4P31152 587 aa23.52■■□□□ 1.36
SLC48A1-207ENST00000549243 TMEM179Q6ZVK1 233 aa23.52■■□□□ 1.36
SLC48A1-207ENST00000549243 CNMDO75829 334 aa23.51■■□□□ 1.35
SLC48A1-207ENST00000549243 FARP2O94887 1054 aaPredicted RBP23.51■■□□□ 1.35
SLC48A1-207ENST00000549243 TFRCP02786 760 aaKnown RBP23.51■■□□□ 1.35
SLC48A1-207ENST00000549243 CDK8P49336 464 aa23.51■■□□□ 1.35
SLC48A1-207ENST00000549243 KBTBD3Q8NAB2 608 aa23.51■■□□□ 1.35
SLC48A1-207ENST00000549243 TRIB2Q92519 343 aa23.51■■□□□ 1.35
SLC48A1-207ENST00000549243 NUDT12Q9BQG2 462 aa23.51■■□□□ 1.35
SLC48A1-207ENST00000549243 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.51■■□□□ 1.35
SLC48A1-207ENST00000549243 CWC22Q9HCG8 908 aaKnown RBP23.51■■□□□ 1.35
SLC48A1-207ENST00000549243 PAK6Q9NQU5 681 aaPredicted RBP23.51■■□□□ 1.35
SLC48A1-207ENST00000549243 RABGAP1Q9Y3P9 1069 aa23.51■■□□□ 1.35
SLC48A1-207ENST00000549243 WDR78Q5VTH9 848 aa23.5■■□□□ 1.35
SLC48A1-207ENST00000549243 CTR9Q6PD62 1173 aa23.5■■□□□ 1.35
SLC48A1-207ENST00000549243 GPR142Q7Z601 462 aa23.5■■□□□ 1.35
SLC48A1-207ENST00000549243 DPF3Q92784 378 aa23.5■■□□□ 1.35
SLC48A1-207ENST00000549243 CRBNQ96SW2 442 aa23.5■■□□□ 1.35
SLC48A1-207ENST00000549243 RLFQ13129 1914 aa23.49■■□□□ 1.35
SLC48A1-207ENST00000549243 C16orf86Q6ZW13 317 aa23.49■■□□□ 1.35
SLC48A1-207ENST00000549243 PLEKHH3Q7Z736 793 aa23.49■■□□□ 1.35
SLC48A1-207ENST00000549243 UBE2Q1Q7Z7E8 422 aa23.49■■□□□ 1.35
SLC48A1-207ENST00000549243 OTUD7AQ8TE49 926 aaPredicted RBP23.49■■□□□ 1.35
SLC48A1-207ENST00000549243 SOCS4Q8WXH5 440 aa23.49■■□□□ 1.35
SLC48A1-207ENST00000549243 STRBPQ96SI9 672 aaKnown RBP23.49■■□□□ 1.35
SLC48A1-207ENST00000549243 TANGO6Q9C0B7 1094 aa23.49■■□□□ 1.35
SLC48A1-207ENST00000549243 SPDYE16A6NNV3 312 aaPredicted RBP23.48■■□□□ 1.35
SLC48A1-207ENST00000549243 RNF113AO15541 343 aaKnown RBP23.48■■□□□ 1.35
SLC48A1-207ENST00000549243 ICA1Q05084 483 aa23.48■■□□□ 1.35
SLC48A1-207ENST00000549243 KIAA1755Q5JYT7 1200 aa23.48■■□□□ 1.35
SLC48A1-207ENST00000549243 STK11IPQ8N1F8 1099 aa23.48■■□□□ 1.35
SLC48A1-207ENST00000549243 OSBP2Q969R2 916 aa23.48■■□□□ 1.35
SLC48A1-207ENST00000549243 GCC1Q96CN9 775 aa23.48■■□□□ 1.35
SLC48A1-207ENST00000549243 BTBD7Q9P203 1132 aa23.48■■□□□ 1.35
SLC48A1-207ENST00000549243 H0YGN5 161 aa23.47■■□□□ 1.35
SLC48A1-207ENST00000549243 CCNA1P78396 465 aa23.47■■□□□ 1.35
SLC48A1-207ENST00000549243 SIAH1Q8IUQ4 282 aa23.47■■□□□ 1.35
SLC48A1-207ENST00000549243 SPICE1Q8N0Z3 855 aa23.47■■□□□ 1.35
SLC48A1-207ENST00000549243 APPBP2Q92624 585 aa23.47■■□□□ 1.35
SLC48A1-207ENST00000549243 CCDC17Q96LX7 622 aa23.47■■□□□ 1.35
SLC48A1-207ENST00000549243 ARHGEF10LQ9HCE6 1279 aa23.47■■□□□ 1.35
SLC48A1-207ENST00000549243 HMX1Q9NP08 348 aaPredicted RBP23.47■■□□□ 1.35
SLC48A1-207ENST00000549243 PARP14Q460N5 1801 aa23.47■■□□□ 1.35
SLC48A1-207ENST00000549243 ATP2B2Q01814 1243 aa23.46■■□□□ 1.35
SLC48A1-207ENST00000549243 CCL14Q16627 93 aa23.46■■□□□ 1.35
SLC48A1-207ENST00000549243 MORN1Q5T089 497 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms