RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 A0A087X0B3 334 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 ERLIN1O75477 346 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 AFMP43652 599 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 FXR1P51114 621 aaKnown RBP eCLIP15.59■□□□□ 0.09
HDAC7-228ENST00000548938 SPATA1Q5VX52 437 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 LEKR1Q6ZMV7 388 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 OXER1Q8TDS5 423 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 ZNF330Q9Y3S2 320 aaPredicted RBP15.59■□□□□ 0.09
HDAC7-228ENST00000548938 SRPRBQ9Y5M8 271 aaKnown RBP15.59■□□□□ 0.09
HDAC7-228ENST00000548938 GYPCP04921 128 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 PDE6AP16499 860 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 LIFRP42702 1097 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 IFIT5Q13325 482 aaKnown RBP15.59■□□□□ 0.09
HDAC7-228ENST00000548938 ZNF579Q8NAF0 562 aaKnown RBP15.59■□□□□ 0.09
HDAC7-228ENST00000548938 WASF1Q92558 559 aa15.59■□□□□ 0.09
HDAC7-228ENST00000548938 MYO5AQ9Y4I1 1855 aaKnown RBP15.58■□□□□ 0.09
HDAC7-228ENST00000548938 SPATA31A1Q5TZJ5 1347 aa15.58■□□□□ 0.09
HDAC7-228ENST00000548938 EIF3JO75822 258 aaKnown RBP15.58■□□□□ 0.08
HDAC7-228ENST00000548938 CUL4BQ13620 913 aa15.58■□□□□ 0.08
HDAC7-228ENST00000548938 CDKAL1Q5VV42 579 aa15.58■□□□□ 0.08
HDAC7-228ENST00000548938 KANK3Q6NY19 840 aa15.58■□□□□ 0.08
HDAC7-228ENST00000548938 FOXR1Q6PIV2 292 aa15.58■□□□□ 0.08
HDAC7-228ENST00000548938 FOXP1Q9H334 677 aaPredicted RBP15.58■□□□□ 0.08
HDAC7-228ENST00000548938 EPB41L4AQ9HCS5 686 aaPredicted RBP15.58■□□□□ 0.08
HDAC7-228ENST00000548938 CASP8Q14790 479 aa15.58■□□□□ 0.08
HDAC7-228ENST00000548938 UBE3CQ15386 1083 aa15.58■□□□□ 0.08
HDAC7-228ENST00000548938 ZKSCAN3Q9BRR0 538 aa15.58■□□□□ 0.08
HDAC7-228ENST00000548938 COBLO75128 1261 aa15.57■□□□□ 0.08
HDAC7-228ENST00000548938 PHACTR2O75167 634 aa15.57■□□□□ 0.08
HDAC7-228ENST00000548938 TRIM22Q8IYM9 498 aa15.57■□□□□ 0.08
HDAC7-228ENST00000548938 SYNE4Q8N205 404 aa15.57■□□□□ 0.08
HDAC7-228ENST00000548938 NOA1Q8NC60 698 aaKnown RBP15.57■□□□□ 0.08
HDAC7-228ENST00000548938 IPO4Q8TEX9 1081 aaKnown RBP15.57■□□□□ 0.08
HDAC7-228ENST00000548938 AIDAQ96BJ3 306 aa15.57■□□□□ 0.08
HDAC7-228ENST00000548938 STRBPQ96SI9 672 aaKnown RBP15.57■□□□□ 0.08
HDAC7-228ENST00000548938 FAM205CA6NFA0 338 aa15.57■□□□□ 0.08
HDAC7-228ENST00000548938 ERVK-24P63145 666 aa15.57■□□□□ 0.08
HDAC7-228ENST00000548938 RTN1Q16799 776 aa15.57■□□□□ 0.08
HDAC7-228ENST00000548938 EPSTI1Q96J88 318 aa15.57■□□□□ 0.08
HDAC7-228ENST00000548938 NAPGQ99747 312 aaPredicted RBP15.57■□□□□ 0.08
HDAC7-228ENST00000548938 CABP5Q9NP86 173 aa15.57■□□□□ 0.08
HDAC7-228ENST00000548938 LRP6O75581 1613 aa15.57■□□□□ 0.08
HDAC7-228ENST00000548938 PLCH1Q4KWH8 1693 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 CTAGE15A4D2H0 777 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 UBAP1LF5GYI3 381 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 CTAGE8P0CG41 777 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 CCT6AP40227 531 aaKnown RBP15.56■□□□□ 0.08
HDAC7-228ENST00000548938 TCIRG1Q13488 830 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 RRP12Q5JTH9 1297 aaKnown RBP15.56■□□□□ 0.08
HDAC7-228ENST00000548938 CTAGE6Q86UF2 777 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 CNGA4Q8IV77 575 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 CTAGE4Q8IX94 777 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 DNAJC10Q8IXB1 793 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 CCDC102AQ96A19 550 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 TTF2Q9UNY4 1162 aaKnown RBP15.56■□□□□ 0.08
HDAC7-228ENST00000548938 RIPOR2Q9Y4F9 1068 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 BCL9O00512 1426 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 TCRBV5S4A2TA0A5A2 114 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 CDC25AP30304 524 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 TNNT3P45378 269 aaPredicted RBP15.56■□□□□ 0.08
HDAC7-228ENST00000548938 DPYDQ12882 1025 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 TTF1Q15361 905 aaPredicted RBP15.56■□□□□ 0.08
HDAC7-228ENST00000548938 LDHAL6AQ6ZMR3 332 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 PLCD3Q8N3E9 789 aa15.56■□□□□ 0.08
HDAC7-228ENST00000548938 MSL3Q8N5Y2 521 aaKnown RBP15.56■□□□□ 0.08
HDAC7-228ENST00000548938 CSF1RP07333 972 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 ARHGAP25P42331 645 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 PHKA1P46020 1223 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 TUBB2AQ13885 445 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 PAXIP1Q6ZW49 1069 aaPredicted RBP15.55■□□□□ 0.08
HDAC7-228ENST00000548938 TUBB2BQ9BVA1 445 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 NAPBQ9H115 298 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 LRRIQ3A6PVS8 624 aaPredicted RBP15.55■□□□□ 0.08
HDAC7-228ENST00000548938 RNF225M0QZC1 329 aaPredicted RBP15.55■□□□□ 0.08
HDAC7-228ENST00000548938 IVLP07476 585 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 FECHP22830 423 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 WHAMMP3Q1A5X7 153 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 FILIP1LQ4L180 1135 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 NCAPH2Q6IBW4 605 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 IFNL3Q8IZI9 196 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 PAGE5Q96GU1 130 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 CEP131Q9UPN4 1083 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 THRAP3Q9Y2W1 955 aaKnown RBP15.55■□□□□ 0.08
HDAC7-228ENST00000548938 KAT6BQ8WYB5 2073 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 NID2Q14112 1375 aa15.55■□□□□ 0.08
HDAC7-228ENST00000548938 PPP1R3GB7ZBB8 358 aa15.54■□□□□ 0.08
HDAC7-228ENST00000548938 DEXIO95424 95 aa15.54■□□□□ 0.08
HDAC7-228ENST00000548938 CTAGE1Q96RT6 745 aa15.54■□□□□ 0.08
HDAC7-228ENST00000548938 CDCA7Q9BWT1 371 aaPredicted RBP15.54■□□□□ 0.08
HDAC7-228ENST00000548938 GREM2Q9H772 168 aa15.54■□□□□ 0.08
HDAC7-228ENST00000548938 TOMM22Q9NS69 142 aa15.54■□□□□ 0.08
HDAC7-228ENST00000548938 TBC1D2BQ9UPU7 963 aa15.54■□□□□ 0.08
HDAC7-228ENST00000548938 CTNND2Q9UQB3 1225 aa15.54■□□□□ 0.08
HDAC7-228ENST00000548938 MBD4O95243 580 aa15.54■□□□□ 0.08
HDAC7-228ENST00000548938 PCCAP05165 728 aaPredicted RBP15.54■□□□□ 0.08
HDAC7-228ENST00000548938 SH3RF1Q7Z6J0 888 aa15.54■□□□□ 0.08
HDAC7-228ENST00000548938 CRACR2BQ8N4Y2 399 aaPredicted RBP15.54■□□□□ 0.08
HDAC7-228ENST00000548938 TTLL11Q8NHH1 800 aa15.54■□□□□ 0.08
HDAC7-228ENST00000548938 SHISA4Q96DD7 197 aa15.54■□□□□ 0.08
HDAC7-228ENST00000548938 SLC4A9Q96Q91 983 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms