RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 SPTBN5Q9NRC6 3674 aaKnown RBP16.63■□□□□ 0.25
CDX2-202ENST00000548877 GDF11O95390 407 aa16.62■□□□□ 0.25
CDX2-202ENST00000548877 GRB14Q14449 540 aa16.62■□□□□ 0.25
CDX2-202ENST00000548877 ZNF697Q5TEC3 545 aa16.62■□□□□ 0.25
CDX2-202ENST00000548877 TATDN1Q6P1N9 297 aa16.62■□□□□ 0.25
CDX2-202ENST00000548877 ATF7IPQ6VMQ6 1270 aa16.62■□□□□ 0.25
CDX2-202ENST00000548877 CATSPERGQ6ZRH7 1159 aa16.62■□□□□ 0.25
CDX2-202ENST00000548877 ADGRA1Q86SQ6 560 aa16.62■□□□□ 0.25
CDX2-202ENST00000548877 MAPKAPK5Q8IW41 473 aa16.62■□□□□ 0.25
CDX2-202ENST00000548877 CRACR2BQ8N4Y2 399 aaPredicted RBP16.62■□□□□ 0.25
CDX2-202ENST00000548877 GPR108Q9NPR9 543 aa16.62■□□□□ 0.25
CDX2-202ENST00000548877 PALD1Q9ULE6 856 aa16.62■□□□□ 0.25
CDX2-202ENST00000548877 ZNF236Q9UL36 1845 aa16.61■□□□□ 0.25
CDX2-202ENST00000548877 MYH1P12882 1939 aa16.61■□□□□ 0.25
CDX2-202ENST00000548877 CDCA7LQ96GN5 454 aa16.61■□□□□ 0.25
CDX2-202ENST00000548877 ZNF512BQ96KM6 892 aaPredicted RBP16.61■□□□□ 0.25
CDX2-202ENST00000548877 CDX2Q99626 313 aaPredicted RBP16.61■□□□□ 0.25
CDX2-202ENST00000548877 KIAA1683Q9H0B3 1180 aa16.61■□□□□ 0.25
CDX2-202ENST00000548877 HLA-DOAP06340 250 aa16.6■□□□□ 0.25
CDX2-202ENST00000548877 USP14P54578 494 aa16.6■□□□□ 0.25
CDX2-202ENST00000548877 RTP1P59025 263 aa16.6■□□□□ 0.25
CDX2-202ENST00000548877 SNX17Q15036 470 aa16.6■□□□□ 0.25
CDX2-202ENST00000548877 TRPV1Q8NER1 839 aa16.6■□□□□ 0.25
CDX2-202ENST00000548877 TRIM34Q9BYJ4 488 aa16.6■□□□□ 0.25
CDX2-202ENST00000548877 SEMA6BQ9H3T3 888 aa16.6■□□□□ 0.25
CDX2-202ENST00000548877 PRKAG2Q9UGJ0 569 aa16.6■□□□□ 0.25
CDX2-202ENST00000548877 GH2P01242 217 aa16.59■□□□□ 0.25
CDX2-202ENST00000548877 CYP2E1P05181 493 aaPredicted RBP16.59■□□□□ 0.25
CDX2-202ENST00000548877 CYBAP13498 195 aa16.59■□□□□ 0.25
CDX2-202ENST00000548877 SMAD3P84022 425 aaKnown RBP16.59■□□□□ 0.25
CDX2-202ENST00000548877 ATP2B2Q01814 1243 aa16.59■□□□□ 0.25
CDX2-202ENST00000548877 G3BP1Q13283 466 aaKnown RBP eCLIP16.59■□□□□ 0.25
CDX2-202ENST00000548877 SHHQ15465 462 aa16.59■□□□□ 0.25
CDX2-202ENST00000548877 C1orf53Q5VUE5 145 aa16.59■□□□□ 0.25
CDX2-202ENST00000548877 ARRDC4Q8NCT1 418 aa16.59■□□□□ 0.25
CDX2-202ENST00000548877 NPLOC4Q8TAT6 608 aa16.59■□□□□ 0.25
CDX2-202ENST00000548877 FAM161BQ96MY7 647 aa16.59■□□□□ 0.25
CDX2-202ENST00000548877 EHD4Q9H223 541 aa16.59■□□□□ 0.25
CDX2-202ENST00000548877 ATN1P54259 1190 aaPredicted RBP16.58■□□□□ 0.24
CDX2-202ENST00000548877 OLFML2BQ68BL8 750 aa16.58■□□□□ 0.24
CDX2-202ENST00000548877 SLC39A5Q6ZMH5 540 aa16.58■□□□□ 0.24
CDX2-202ENST00000548877 CERS3Q8IU89 383 aa16.58■□□□□ 0.24
CDX2-202ENST00000548877 CWC22Q9HCG8 908 aaKnown RBP16.58■□□□□ 0.24
CDX2-202ENST00000548877 BTBD7Q9P203 1132 aa16.58■□□□□ 0.24
CDX2-202ENST00000548877 PNMA6EA0A0J9YXQ4 647 aa16.57■□□□□ 0.24
CDX2-202ENST00000548877 VCAM1P19320 739 aa16.57■□□□□ 0.24
CDX2-202ENST00000548877 CYP2C19P33261 490 aa16.57■□□□□ 0.24
CDX2-202ENST00000548877 CCDC158Q5M9N0 1113 aa16.57■□□□□ 0.24
CDX2-202ENST00000548877 MAFAQ8NHW3 353 aaPredicted RBP16.57■□□□□ 0.24
CDX2-202ENST00000548877 SNRKQ9NRH2 765 aa16.57■□□□□ 0.24
CDX2-202ENST00000548877 IVNS1ABPQ9Y6Y0 642 aa16.57■□□□□ 0.24
CDX2-202ENST00000548877 CDH23Q9H251 3354 aa16.57■□□□□ 0.24
CDX2-202ENST00000548877 TMEM265A0A087WTH1 108 aa16.56■□□□□ 0.24
CDX2-202ENST00000548877 SPDYE16A6NNV3 312 aaPredicted RBP16.56■□□□□ 0.24
CDX2-202ENST00000548877 STRNO43815 780 aa16.56■□□□□ 0.24
CDX2-202ENST00000548877 GNAI2P04899 355 aa16.56■□□□□ 0.24
CDX2-202ENST00000548877 CNGA1P29973 690 aa16.56■□□□□ 0.24
CDX2-202ENST00000548877 RARSP54136 660 aaKnown RBP16.56■□□□□ 0.24
CDX2-202ENST00000548877 TNNI3KQ59H18 835 aa16.56■□□□□ 0.24
CDX2-202ENST00000548877 C9orf50Q5SZB4 431 aa16.56■□□□□ 0.24
CDX2-202ENST00000548877 TMED8Q6PL24 325 aaPredicted RBP16.56■□□□□ 0.24
CDX2-202ENST00000548877 PRDM6Q9NQX0 595 aa16.56■□□□□ 0.24
CDX2-202ENST00000548877 SAP30BPQ9UHR5 308 aaKnown RBP16.56■□□□□ 0.24
CDX2-202ENST00000548877 SERPINB13Q9UIV8 391 aa16.56■□□□□ 0.24
CDX2-202ENST00000548877 NDUFB9Q9Y6M9 179 aa16.56■□□□□ 0.24
CDX2-202ENST00000548877 FPGT-TNNI3KV9GXZ4 949 aa16.56■□□□□ 0.24
CDX2-202ENST00000548877 TTC28Q96AY4 2481 aa16.56■□□□□ 0.24
CDX2-202ENST00000548877 SEPT4O43236 478 aa16.55■□□□□ 0.24
CDX2-202ENST00000548877 TTC39AQ5SRH9 613 aa16.55■□□□□ 0.24
CDX2-202ENST00000548877 GJC2Q5T442 439 aaPredicted RBP16.55■□□□□ 0.24
CDX2-202ENST00000548877 SHCBP1Q8NEM2 672 aa16.55■□□□□ 0.24
CDX2-202ENST00000548877 ACER1Q8TDN7 264 aa16.55■□□□□ 0.24
CDX2-202ENST00000548877 FEZ1Q99689 392 aa16.55■□□□□ 0.24
CDX2-202ENST00000548877 DBNDD2Q9BQY9 259 aa16.55■□□□□ 0.24
CDX2-202ENST00000548877 TTYH1Q9H313 450 aaPredicted RBP16.55■□□□□ 0.24
CDX2-202ENST00000548877 ATP11BQ9Y2G3 1177 aa16.55■□□□□ 0.24
CDX2-202ENST00000548877 A0A0G2JMZ2 1700 aa16.55■□□□□ 0.24
CDX2-202ENST00000548877 KBTBD13C9JR72 458 aa16.54■□□□□ 0.24
CDX2-202ENST00000548877 DYNLL1P63167 89 aaKnown RBP16.54■□□□□ 0.24
CDX2-202ENST00000548877 POLA2Q14181 598 aa16.54■□□□□ 0.24
CDX2-202ENST00000548877 ZYXQ15942 572 aaKnown RBP16.54■□□□□ 0.24
CDX2-202ENST00000548877 WDR78Q5VTH9 848 aa16.54■□□□□ 0.24
CDX2-202ENST00000548877 PIH1D3Q9NQM4 214 aaKnown RBP16.54■□□□□ 0.24
CDX2-202ENST00000548877 PDLIM7Q9NR12 457 aa16.54■□□□□ 0.24
CDX2-202ENST00000548877 GUCY1A2P33402 732 aa16.53■□□□□ 0.24
CDX2-202ENST00000548877 ZAP70P43403 619 aa16.53■□□□□ 0.24
CDX2-202ENST00000548877 ABCB5Q2M3G0 1257 aa16.53■□□□□ 0.24
CDX2-202ENST00000548877 CERKLQ49MI3 558 aaPredicted RBP16.53■□□□□ 0.24
CDX2-202ENST00000548877 TTC6Q86TZ1 520 aa16.53■□□□□ 0.24
CDX2-202ENST00000548877 SYMPKQ92797 1274 aaKnown RBP16.53■□□□□ 0.24
CDX2-202ENST00000548877 BADQ92934 168 aa16.53■□□□□ 0.24
CDX2-202ENST00000548877 MOV10L1Q9BXT6 1211 aaKnown RBP16.53■□□□□ 0.24
CDX2-202ENST00000548877 RPAP3Q9H6T3 665 aaPredicted RBP16.53■□□□□ 0.24
CDX2-202ENST00000548877 HOXC10Q9NYD6 342 aa16.53■□□□□ 0.24
CDX2-202ENST00000548877 SMCHD1A6NHR9 2005 aa16.53■□□□□ 0.24
CDX2-202ENST00000548877 ZNFX1Q9P2E3 1918 aaKnown RBP16.53■□□□□ 0.24
CDX2-202ENST00000548877 TRIM43BA6NCK2 446 aa16.52■□□□□ 0.24
CDX2-202ENST00000548877 CYP7A1P22680 504 aa16.52■□□□□ 0.24
CDX2-202ENST00000548877 ADORA2AP29274 412 aa16.52■□□□□ 0.24
CDX2-202ENST00000548877 SHMT1P34896 483 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms