RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 VCAM1P19320 739 aa21.06■□□□□ 0.96
CHMP1A-205ENST00000548650 GUCY1A2P33402 732 aa21.06■□□□□ 0.96
CHMP1A-205ENST00000548650 ADD2P35612 726 aa21.06■□□□□ 0.96
CHMP1A-205ENST00000548650 ERVK-9P63128 1117 aa21.06■□□□□ 0.96
CHMP1A-205ENST00000548650 ERVK-24P63145 666 aa21.06■□□□□ 0.96
CHMP1A-205ENST00000548650 ACER1Q8TDN7 264 aa21.06■□□□□ 0.96
CHMP1A-205ENST00000548650 SOCS4Q8WXH5 440 aa21.06■□□□□ 0.96
CHMP1A-205ENST00000548650 TRIB2Q92519 343 aa21.06■□□□□ 0.96
CHMP1A-205ENST00000548650 BOLA2Q9H3K6 86 aa21.06■□□□□ 0.96
CHMP1A-205ENST00000548650 DCP1AQ9NPI6 582 aaPredicted RBP21.06■□□□□ 0.96
CHMP1A-205ENST00000548650 MCM9Q9NXL9 1143 aa21.06■□□□□ 0.96
CHMP1A-205ENST00000548650 COLQQ9Y215 455 aaPredicted RBP21.06■□□□□ 0.96
CHMP1A-205ENST00000548650 FRMPD3Q5JV73 1810 aa21.06■□□□□ 0.96
CHMP1A-205ENST00000548650 POLR3DP05423 398 aaPredicted RBP21.05■□□□□ 0.96
CHMP1A-205ENST00000548650 TRIM32Q13049 653 aa21.05■□□□□ 0.96
CHMP1A-205ENST00000548650 SLFNL1Q499Z3 407 aa21.05■□□□□ 0.96
CHMP1A-205ENST00000548650 HAUS7Q99871 368 aa21.05■□□□□ 0.96
CHMP1A-205ENST00000548650 PAGR1Q9BTK6 254 aa21.05■□□□□ 0.96
CHMP1A-205ENST00000548650 HTATIP2Q9BUP3 242 aa21.05■□□□□ 0.96
CHMP1A-205ENST00000548650 PORCNQ9H237 461 aa21.05■□□□□ 0.96
CHMP1A-205ENST00000548650 ARMT1Q9H993 441 aa21.05■□□□□ 0.96
CHMP1A-205ENST00000548650 PARP14Q460N5 1801 aa21.05■□□□□ 0.96
CHMP1A-205ENST00000548650 CYP2D6P10635 497 aa21.04■□□□□ 0.96
CHMP1A-205ENST00000548650 MAPK4P31152 587 aa21.04■□□□□ 0.96
CHMP1A-205ENST00000548650 USP14P54578 494 aa21.04■□□□□ 0.96
CHMP1A-205ENST00000548650 Q3C1V9 767 aa21.04■□□□□ 0.96
CHMP1A-205ENST00000548650 DPF3Q92784 378 aa21.04■□□□□ 0.96
CHMP1A-205ENST00000548650 CABP5Q9NP86 173 aa21.04■□□□□ 0.96
CHMP1A-205ENST00000548650 USP17L15C9J2P7 530 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 USP17L13C9JLJ4 530 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 USP17L11C9JVI0 530 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 USP17L18D6R9N7 530 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 USP17L22D6RA61 530 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 USP17L17D6RBQ6 530 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 USP17L19D6RCP7 530 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 USP17L20D6RJB6 530 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 CNMDO75829 334 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 MBD4O95243 580 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 CHGBP05060 677 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 CAPN2P17655 700 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 USP17L24Q0WX57 530 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 SEPT2Q15019 361 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 GPR142Q7Z601 462 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 SLC44A5Q8NCS7 719 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 NUDT12Q9BQG2 462 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 LRRCC1Q9C099 1032 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 PCDH10Q9P2E7 1040 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 ZNF236Q9UL36 1845 aa21.03■□□□□ 0.96
CHMP1A-205ENST00000548650 PRKAB2O43741 272 aa21.02■□□□□ 0.96
CHMP1A-205ENST00000548650 TFRCP02786 760 aaKnown RBP21.02■□□□□ 0.96
CHMP1A-205ENST00000548650 CYP2B6P20813 491 aa21.02■□□□□ 0.96
CHMP1A-205ENST00000548650 MAP3K21Q5TCX8 1036 aa21.02■□□□□ 0.96
CHMP1A-205ENST00000548650 CATSPERGQ6ZRH7 1159 aa21.02■□□□□ 0.96
CHMP1A-205ENST00000548650 USP6NLQ92738 828 aa21.02■□□□□ 0.96
CHMP1A-205ENST00000548650 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.02■□□□□ 0.96
CHMP1A-205ENST00000548650 RABGAP1Q9Y3P9 1069 aa21.02■□□□□ 0.96
CHMP1A-205ENST00000548650 RPTORQ8N122 1335 aa21.02■□□□□ 0.95
CHMP1A-205ENST00000548650 SMARCA5O60264 1052 aaPredicted RBP21.01■□□□□ 0.95
CHMP1A-205ENST00000548650 XRCC5P13010 732 aaKnown RBP21.01■□□□□ 0.95
CHMP1A-205ENST00000548650 FXR1P51114 621 aaKnown RBP eCLIP21.01■□□□□ 0.95
CHMP1A-205ENST00000548650 MORN1Q5T089 497 aa21.01■□□□□ 0.95
CHMP1A-205ENST00000548650 LBX2Q6XYB7 198 aa21.01■□□□□ 0.95
CHMP1A-205ENST00000548650 DIS3LQ8TF46 1054 aaKnown RBP21.01■□□□□ 0.95
CHMP1A-205ENST00000548650 GREB1LQ9C091 1923 aaPredicted RBP21.01■□□□□ 0.95
CHMP1A-205ENST00000548650 RANBP2P49792 3224 aaKnown RBP21■□□□□ 0.95
CHMP1A-205ENST00000548650 A0A1W2PRG0 241 aa21■□□□□ 0.95
CHMP1A-205ENST00000548650 SPDYE16A6NNV3 312 aaPredicted RBP21■□□□□ 0.95
CHMP1A-205ENST00000548650 UBE3CQ15386 1083 aa21■□□□□ 0.95
CHMP1A-205ENST00000548650 CHRDL2Q6WN34 429 aa21■□□□□ 0.95
CHMP1A-205ENST00000548650 PLEKHH3Q7Z736 793 aa21■□□□□ 0.95
CHMP1A-205ENST00000548650 APBA2Q99767 749 aa21■□□□□ 0.95
CHMP1A-205ENST00000548650 RPAP3Q9H6T3 665 aaPredicted RBP21■□□□□ 0.95
CHMP1A-205ENST00000548650 HMX1Q9NP08 348 aaPredicted RBP21■□□□□ 0.95
CHMP1A-205ENST00000548650 SWAP70Q9UH65 585 aa21■□□□□ 0.95
CHMP1A-205ENST00000548650 MPHOSPH10O00566 681 aaKnown RBP20.99■□□□□ 0.95
CHMP1A-205ENST00000548650 PRKAR2AP13861 404 aaKnown RBP20.99■□□□□ 0.95
CHMP1A-205ENST00000548650 ZKSCAN1P17029 563 aaPredicted RBP20.99■□□□□ 0.95
CHMP1A-205ENST00000548650 RGS2P41220 211 aa20.99■□□□□ 0.95
CHMP1A-205ENST00000548650 DYNLL2Q96FJ2 89 aa20.99■□□□□ 0.95
CHMP1A-205ENST00000548650 PAWRQ96IZ0 340 aaKnown RBP20.99■□□□□ 0.95
CHMP1A-205ENST00000548650 ATP8A2Q9NTI2 1148 aa20.99■□□□□ 0.95
CHMP1A-205ENST00000548650 SMIM22K7EJ46 135 aa20.98■□□□□ 0.95
CHMP1A-205ENST00000548650 CCL14Q16627 93 aa20.98■□□□□ 0.95
CHMP1A-205ENST00000548650 TMEM179Q6ZVK1 233 aa20.98■□□□□ 0.95
CHMP1A-205ENST00000548650 CLEC10AQ8IUN9 316 aa20.98■□□□□ 0.95
CHMP1A-205ENST00000548650 CCAR1Q8IX12 1150 aaKnown RBP20.98■□□□□ 0.95
CHMP1A-205ENST00000548650 TRMT44Q8IYL2 757 aaKnown RBP20.98■□□□□ 0.95
CHMP1A-205ENST00000548650 ANKLE1Q8NAG6 615 aa20.98■□□□□ 0.95
CHMP1A-205ENST00000548650 BTBD7Q9P203 1132 aa20.98■□□□□ 0.95
CHMP1A-205ENST00000548650 CYP2D7A0A087X1C5 515 aa20.97■□□□□ 0.95
CHMP1A-205ENST00000548650 AKR1B1P15121 316 aa20.97■□□□□ 0.95
CHMP1A-205ENST00000548650 MNX1P50219 401 aaPredicted RBP20.97■□□□□ 0.95
CHMP1A-205ENST00000548650 CCNA1P78396 465 aa20.97■□□□□ 0.95
CHMP1A-205ENST00000548650 NR2E3Q9Y5X4 410 aa20.97■□□□□ 0.95
CHMP1A-205ENST00000548650 C12orf60Q5U649 245 aa20.96■□□□□ 0.95
CHMP1A-205ENST00000548650 NECAB2Q7Z6G3 386 aa20.96■□□□□ 0.95
CHMP1A-205ENST00000548650 PUS7LQ9H0K6 701 aaKnown RBP20.96■□□□□ 0.95
CHMP1A-205ENST00000548650 PRO3102Q9H379 93 aa20.96■□□□□ 0.95
CHMP1A-205ENST00000548650 ECHDC1Q9NTX5 307 aa20.96■□□□□ 0.95
CHMP1A-205ENST00000548650 OGDHLQ9ULD0 1010 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms