RNA–Protein interactions for RNA: ENST00000548355.5

TMEM106C-208, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-208ENST00000548355 TCP10Q12799 353 aa9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 DLGAP5Q15398 846 aa9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 SAFBQ15424 915 aaKnown RBP eCLIP9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 KRT40Q6A162 431 aa9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 CIAPIN1Q6FI81 312 aa9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 CAVIN1Q6NZI2 390 aaKnown RBP9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 TMTC3Q6ZXV5 915 aa9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 BRAPQ7Z569 592 aa9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 ZSCAN29Q8IWY8 852 aaPredicted RBP9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 CMTR1Q8N1G2 835 aaKnown RBP9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 SYAP1Q96A49 352 aaPredicted RBP9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 AIFM3Q96NN9 605 aa9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 GMLQ99445 158 aa9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 EHD4Q9H223 541 aa9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 TDRD3Q9H7E2 651 aaKnown RBP9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 TFIP11Q9UBB9 837 aaKnown RBP9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 FAM198AQ9UFP1 575 aa9.06□□□□□ -0.96
TMEM106C-208ENST00000548355 COL4A5P29400 1685 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 PLIN4Q96Q06 1357 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 GOLGA6L4A6NEF3 574 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 SPDYE2BA6NHP3 402 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 NFKBIEO00221 500 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 PRPF3O43395 683 aaKnown RBP9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 PLEKHA8P1O95397 391 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 SPDYE6P0CI01 402 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 TOP1P11387 765 aaKnown RBP9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 DEKP35659 375 aaKnown RBP9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 GNAQP50148 359 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 KIF23Q02241 960 aaPredicted RBP9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 CXCL9Q07325 125 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 GRM4Q14833 912 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 TNIP1Q15025 636 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 PPP4R3BQ5MIZ7 849 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 ZFPM1Q8IX07 1006 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 LEO1Q8WVC0 666 aaPredicted RBP9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 PRMT6Q96LA8 375 aaPredicted RBP9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 TMEM47Q9BQJ4 181 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 SPON1Q9HCB6 807 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 GJB4Q9NTQ9 266 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 RBM27Q9P2N5 1060 aaKnown RBP9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 PI4KBQ9UBF8 816 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 ZBTB12Q9Y330 459 aaPredicted RBP9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 PSME4Q14997 1843 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 LTBP3Q9NS15 1303 aa9.05□□□□□ -0.96
TMEM106C-208ENST00000548355 ECM29Q5VYK3 1845 aa9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 DDTLA6NHG4 134 aaPredicted RBP9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 MPHOSPH10O00566 681 aaKnown RBP9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 MYO1BO43795 1136 aa9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 AKR1B1P15121 316 aa9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 GUCY1A2P33402 732 aa9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 SHMT1P34896 483 aa9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 MMP14P50281 582 aa9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 CEBPZQ03701 1054 aaKnown RBP9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 FUT2Q10981 343 aa9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 TPRNQ4KMQ1 711 aa9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 FOXP4Q8IVH2 680 aaPredicted RBP9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 SRBD1Q8N5C6 995 aaKnown RBP9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 CEP95Q96GE4 821 aa9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 CCDC17Q96LX7 622 aa9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 LZTS2Q9BRK4 669 aa9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 V9GY48 417 aaPredicted RBP9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 BRCA1P38398 1863 aaKnown RBP9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 CNTNAP5Q8WYK1 1306 aa9.04□□□□□ -0.96
TMEM106C-208ENST00000548355 COL2A1P02458 1487 aaPredicted RBP9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 ATRNL1Q5VV63 1379 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 FER1L6Q2WGJ9 1857 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 IGKV6D-41A0A0C4DH26 115 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 CLRN2A0PK11 232 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 GOLGA6L3A6NEY3 463 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 KIF28PB7ZC32 967 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 TCP10L2B9ZVM9 353 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 UBE2Q2LH0YL09 131 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 MMP1P03956 469 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 PARP1P09874 1014 aaKnown RBP9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 RPS12P25398 132 aaKnown RBP9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 NOVP48745 357 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 EIF6P56537 245 aaKnown RBP9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 RASSF7Q02833 373 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 ZSCAN23Q3MJ62 389 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 MYSM1Q5VVJ2 828 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 SH3BP5LQ7L8J4 393 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 MTMR14Q8NCE2 650 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 NLGN2Q8NFZ4 835 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 USP28Q96RU2 1077 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 MTMR4Q9NYA4 1195 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 RTEL1Q9NZ71 1219 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 ZNF70Q9UC06 446 aaPredicted RBP9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 MAD2L2Q9UI95 211 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 RCOR1Q9UKL0 485 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 MTMR7Q9Y216 660 aa9.03□□□□□ -0.96
TMEM106C-208ENST00000548355 hCG_1642624A0A1W2PR95 340 aa9.02□□□□□ -0.97
TMEM106C-208ENST00000548355 PALM3A6NDB9 673 aaPredicted RBP9.02□□□□□ -0.97
TMEM106C-208ENST00000548355 TTLL1O95922 423 aa9.02□□□□□ -0.97
TMEM106C-208ENST00000548355 SCG2P13521 617 aa9.02□□□□□ -0.97
TMEM106C-208ENST00000548355 U2AF2P26368 475 aaKnown RBP eCLIP9.02□□□□□ -0.97
TMEM106C-208ENST00000548355 STK38Q15208 465 aa9.02□□□□□ -0.97
TMEM106C-208ENST00000548355 SF3A1Q15459 793 aaKnown RBP9.02□□□□□ -0.97
TMEM106C-208ENST00000548355 PKN1Q16512 942 aa9.02□□□□□ -0.97
TMEM106C-208ENST00000548355 PFKFB3Q16875 520 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms