RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 NPY5RQ15761 445 aa18.37■□□□□ 0.53
CNOT2-209ENST00000548159 SLC4A8Q2Y0W8 1093 aa18.37■□□□□ 0.53
CNOT2-209ENST00000548159 CAVIN4Q5BKX8 364 aa18.37■□□□□ 0.53
CNOT2-209ENST00000548159 SPATA20Q8TB22 786 aa18.37■□□□□ 0.53
CNOT2-209ENST00000548159 ENOX1Q8TC92 643 aaKnown RBP18.37■□□□□ 0.53
CNOT2-209ENST00000548159 BSDC1Q9NW68 430 aaPredicted RBP18.37■□□□□ 0.53
CNOT2-209ENST00000548159 OGFRQ9NZT2 677 aa18.37■□□□□ 0.53
CNOT2-209ENST00000548159 JAG2Q9Y219 1238 aa18.37■□□□□ 0.53
CNOT2-209ENST00000548159 KRT2P35908 639 aa18.37■□□□□ 0.53
CNOT2-209ENST00000548159 FAM47AQ5JRC9 791 aa18.37■□□□□ 0.53
CNOT2-209ENST00000548159 CATIPQ7Z7H3 387 aa18.37■□□□□ 0.53
CNOT2-209ENST00000548159 STAMQ92783 540 aa18.37■□□□□ 0.53
CNOT2-209ENST00000548159 CEP131Q9UPN4 1083 aa18.37■□□□□ 0.53
CNOT2-209ENST00000548159 PRPF3O43395 683 aaKnown RBP18.36■□□□□ 0.53
CNOT2-209ENST00000548159 CD44P16070 742 aaKnown RBP18.36■□□□□ 0.53
CNOT2-209ENST00000548159 STX17P56962 302 aa18.36■□□□□ 0.53
CNOT2-209ENST00000548159 KLHL10Q6JEL2 608 aa18.36■□□□□ 0.53
CNOT2-209ENST00000548159 SMYD4Q8IYR2 804 aaPredicted RBP18.36■□□□□ 0.53
CNOT2-209ENST00000548159 TC2NQ8N9U0 490 aa18.36■□□□□ 0.53
CNOT2-209ENST00000548159 ZNF397Q8NF99 534 aaPredicted RBP18.36■□□□□ 0.53
CNOT2-209ENST00000548159 SYMPKQ92797 1274 aaKnown RBP18.36■□□□□ 0.53
CNOT2-209ENST00000548159 AATFQ9NY61 560 aaKnown RBP eCLIP18.36■□□□□ 0.53
CNOT2-209ENST00000548159 TFCP2L1Q9NZI6 479 aa18.36■□□□□ 0.53
CNOT2-209ENST00000548159 DHX8Q14562 1220 aaKnown RBP18.35■□□□□ 0.53
CNOT2-209ENST00000548159 SF3B3Q15393 1217 aaKnown RBP18.35■□□□□ 0.53
CNOT2-209ENST00000548159 LINC00116Q8NCU8 138 aa18.35■□□□□ 0.53
CNOT2-209ENST00000548159 BRIP1Q9BX63 1249 aa18.35■□□□□ 0.53
CNOT2-209ENST00000548159 CYP2D6P10635 497 aa18.35■□□□□ 0.53
CNOT2-209ENST00000548159 MECOMQ03112 1051 aa18.35■□□□□ 0.53
CNOT2-209ENST00000548159 DMTNQ08495 405 aa18.35■□□□□ 0.53
CNOT2-209ENST00000548159 IQCA1Q86XH1 822 aa18.35■□□□□ 0.53
CNOT2-209ENST00000548159 SRBD1Q8N5C6 995 aaKnown RBP18.35■□□□□ 0.53
CNOT2-209ENST00000548159 ZNF652Q9Y2D9 606 aa18.35■□□□□ 0.53
CNOT2-209ENST00000548159 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.35■□□□□ 0.53
CNOT2-209ENST00000548159 TEX33O43247 280 aa18.34■□□□□ 0.53
CNOT2-209ENST00000548159 COBLO75128 1261 aa18.34■□□□□ 0.53
CNOT2-209ENST00000548159 NSUN4Q96CB9 384 aaKnown RBP18.34■□□□□ 0.53
CNOT2-209ENST00000548159 BAG1Q99933 345 aaPredicted RBP18.34■□□□□ 0.53
CNOT2-209ENST00000548159 CDCA7Q9BWT1 371 aaPredicted RBP18.34■□□□□ 0.53
CNOT2-209ENST00000548159 PPP2R2CQ9Y2T4 447 aa18.34■□□□□ 0.53
CNOT2-209ENST00000548159 DUOX1Q9NRD9 1551 aa18.34■□□□□ 0.53
CNOT2-209ENST00000548159 VWA3AA6NCI4 1184 aa18.34■□□□□ 0.53
CNOT2-209ENST00000548159 MYO1BO43795 1136 aa18.34■□□□□ 0.53
CNOT2-209ENST00000548159 XBP1P17861 261 aa18.34■□□□□ 0.53
CNOT2-209ENST00000548159 GTF2E1P29083 439 aaPredicted RBP18.34■□□□□ 0.53
CNOT2-209ENST00000548159 PRDX5P30044 214 aa18.34■□□□□ 0.53
CNOT2-209ENST00000548159 TBC1D9BQ66K14 1250 aa18.34■□□□□ 0.53
CNOT2-209ENST00000548159 SPECC1LQ69YQ0 1117 aa18.34■□□□□ 0.53
CNOT2-209ENST00000548159 TOGARAM2Q6ZUX3 1019 aa18.34■□□□□ 0.53
CNOT2-209ENST00000548159 PAGE5Q96GU1 130 aa18.34■□□□□ 0.53
CNOT2-209ENST00000548159 WNK3Q9BYP7 1800 aa18.34■□□□□ 0.53
CNOT2-209ENST00000548159 FGRP09769 529 aa18.33■□□□□ 0.53
CNOT2-209ENST00000548159 PPP2R5BQ15173 497 aa18.33■□□□□ 0.53
CNOT2-209ENST00000548159 PTF1AQ7RTS3 328 aa18.33■□□□□ 0.53
CNOT2-209ENST00000548159 TNFRSF25Q93038 417 aa18.33■□□□□ 0.53
CNOT2-209ENST00000548159 PKNOX2Q96KN3 472 aa18.33■□□□□ 0.53
CNOT2-209ENST00000548159 ZNF446Q9NWS9 450 aa18.33■□□□□ 0.53
CNOT2-209ENST00000548159 NUTM2BA6NNL0 878 aaPredicted RBP18.33■□□□□ 0.52
CNOT2-209ENST00000548159 NUTM2EB1AL46 878 aaPredicted RBP18.33■□□□□ 0.52
CNOT2-209ENST00000548159 ARHGAP6O43182 974 aa18.33■□□□□ 0.52
CNOT2-209ENST00000548159 PLCD1P51178 756 aa18.33■□□□□ 0.52
CNOT2-209ENST00000548159 NR1I3Q14994 352 aa18.33■□□□□ 0.52
CNOT2-209ENST00000548159 KANK3Q6NY19 840 aa18.33■□□□□ 0.52
CNOT2-209ENST00000548159 CLEC4GQ6UXB4 293 aa18.33■□□□□ 0.52
CNOT2-209ENST00000548159 TMTC3Q6ZXV5 915 aa18.33■□□□□ 0.52
CNOT2-209ENST00000548159 SLC51AQ86UW1 340 aa18.33■□□□□ 0.52
CNOT2-209ENST00000548159 NUTM2AQ8IVF1 878 aaPredicted RBP18.33■□□□□ 0.52
CNOT2-209ENST00000548159 TRIML1Q8N9V2 468 aa18.33■□□□□ 0.52
CNOT2-209ENST00000548159 DCP1AQ9NPI6 582 aaPredicted RBP18.33■□□□□ 0.52
CNOT2-209ENST00000548159 SLFN14P0C7P3 912 aa18.32■□□□□ 0.52
CNOT2-209ENST00000548159 PTGDRQ13258 359 aa18.32■□□□□ 0.52
CNOT2-209ENST00000548159 APTXQ7Z2E3 356 aaKnown RBP18.32■□□□□ 0.52
CNOT2-209ENST00000548159 FBXO33Q7Z6M2 555 aa18.32■□□□□ 0.52
CNOT2-209ENST00000548159 DACH1Q9UI36 760 aa18.32■□□□□ 0.52
CNOT2-209ENST00000548159 ZHX1Q9UKY1 873 aaPredicted RBP18.32■□□□□ 0.52
CNOT2-209ENST00000548159 MYH13Q9UKX3 1938 aa18.32■□□□□ 0.52
CNOT2-209ENST00000548159 ROBO1Q9Y6N7 1651 aa18.32■□□□□ 0.52
CNOT2-209ENST00000548159 URI1O94763 535 aaPredicted RBP18.32■□□□□ 0.52
CNOT2-209ENST00000548159 MTF1Q14872 753 aa18.32■□□□□ 0.52
CNOT2-209ENST00000548159 SH3RF1Q7Z6J0 888 aa18.32■□□□□ 0.52
CNOT2-209ENST00000548159 TXNRD3Q86VQ6 643 aa18.32■□□□□ 0.52
CNOT2-209ENST00000548159 DESI2Q9BSY9 194 aa18.32■□□□□ 0.52
CNOT2-209ENST00000548159 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.32■□□□□ 0.52
CNOT2-209ENST00000548159 MORC2Q9Y6X9 1032 aaPredicted RBP18.32■□□□□ 0.52
CNOT2-209ENST00000548159 CNTNAP5Q8WYK1 1306 aa18.32■□□□□ 0.52
CNOT2-209ENST00000548159 WDR24Q96S15 920 aa18.31■□□□□ 0.52
CNOT2-209ENST00000548159 THRAP3Q9Y2W1 955 aaKnown RBP18.31■□□□□ 0.52
CNOT2-209ENST00000548159 PHLPP2Q6ZVD8 1323 aa18.31■□□□□ 0.52
CNOT2-209ENST00000548159 LAMB2P55268 1798 aa18.31■□□□□ 0.52
CNOT2-209ENST00000548159 TTC38Q5R3I4 469 aa18.31■□□□□ 0.52
CNOT2-209ENST00000548159 RBM28Q9NW13 759 aaKnown RBP18.31■□□□□ 0.52
CNOT2-209ENST00000548159 RREB1Q92766 1687 aa18.31■□□□□ 0.52
CNOT2-209ENST00000548159 CCP110O43303 1012 aa18.3■□□□□ 0.52
CNOT2-209ENST00000548159 ERCC5P28715 1186 aaPredicted RBP18.3■□□□□ 0.52
CNOT2-209ENST00000548159 DPYDQ12882 1025 aa18.3■□□□□ 0.52
CNOT2-209ENST00000548159 CUL4BQ13620 913 aa18.3■□□□□ 0.52
CNOT2-209ENST00000548159 PIK3AP1Q6ZUJ8 805 aa18.3■□□□□ 0.52
CNOT2-209ENST00000548159 BLZF1Q9H2G9 400 aa18.3■□□□□ 0.52
CNOT2-209ENST00000548159 SRP68Q9UHB9 627 aaKnown RBP18.3■□□□□ 0.52
CNOT2-209ENST00000548159 PARP3Q9Y6F1 533 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms