RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 Q3C1V9 767 aa25.89■■□□□ 1.74
USP44-204ENST00000547951 U2AF1L4Q8WU68 220 aaKnown RBP25.89■■□□□ 1.74
USP44-204ENST00000547951 C12orf42Q96LP6 360 aa25.89■■□□□ 1.74
USP44-204ENST00000547951 DCTPP1Q9H773 170 aa25.89■■□□□ 1.74
USP44-204ENST00000547951 MYH8P13535 1937 aa25.88■■□□□ 1.73
USP44-204ENST00000547951 TRIM32Q13049 653 aa25.88■■□□□ 1.73
USP44-204ENST00000547951 UBE2Q1Q7Z7E8 422 aa25.88■■□□□ 1.73
USP44-204ENST00000547951 PAGR1Q9BTK6 254 aa25.88■■□□□ 1.73
USP44-204ENST00000547951 KIAA1683Q9H0B3 1180 aa25.88■■□□□ 1.73
USP44-204ENST00000547951 PORCNQ9H237 461 aa25.88■■□□□ 1.73
USP44-204ENST00000547951 VCAM1P19320 739 aa25.87■■□□□ 1.73
USP44-204ENST00000547951 GPRC5AQ8NFJ5 357 aa25.87■■□□□ 1.73
USP44-204ENST00000547951 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.87■■□□□ 1.73
USP44-204ENST00000547951 CABP5Q9NP86 173 aa25.87■■□□□ 1.73
USP44-204ENST00000547951 PCDHB15Q9Y5E8 787 aa25.87■■□□□ 1.73
USP44-204ENST00000547951 A0A1W2PRG0 241 aa25.86■■□□□ 1.73
USP44-204ENST00000547951 MPHOSPH10O00566 681 aaKnown RBP25.86■■□□□ 1.73
USP44-204ENST00000547951 ERVK-9P63128 1117 aa25.86■■□□□ 1.73
USP44-204ENST00000547951 ERVK-24P63145 666 aa25.86■■□□□ 1.73
USP44-204ENST00000547951 CLEC10AQ8IUN9 316 aa25.86■■□□□ 1.73
USP44-204ENST00000547951 PUS7LQ9H0K6 701 aaKnown RBP25.86■■□□□ 1.73
USP44-204ENST00000547951 CNMDO75829 334 aa25.85■■□□□ 1.73
USP44-204ENST00000547951 UBE3CQ15386 1083 aa25.85■■□□□ 1.73
USP44-204ENST00000547951 NKX2-3Q8TAU0 364 aa25.85■■□□□ 1.73
USP44-204ENST00000547951 DEFB118Q96PH6 123 aa25.85■■□□□ 1.73
USP44-204ENST00000547951 ECHDC1Q9NTX5 307 aa25.85■■□□□ 1.73
USP44-204ENST00000547951 SGPL1O95470 568 aa25.84■■□□□ 1.73
USP44-204ENST00000547951 KIAA1755Q5JYT7 1200 aa25.84■■□□□ 1.73
USP44-204ENST00000547951 PAK6Q9NQU5 681 aaPredicted RBP25.84■■□□□ 1.73
USP44-204ENST00000547951 USP17L15C9J2P7 530 aa25.83■■□□□ 1.73
USP44-204ENST00000547951 USP17L13C9JLJ4 530 aa25.83■■□□□ 1.73
USP44-204ENST00000547951 USP17L11C9JVI0 530 aa25.83■■□□□ 1.73
USP44-204ENST00000547951 USP17L18D6R9N7 530 aa25.83■■□□□ 1.73
USP44-204ENST00000547951 USP17L22D6RA61 530 aa25.83■■□□□ 1.73
USP44-204ENST00000547951 USP17L17D6RBQ6 530 aa25.83■■□□□ 1.73
USP44-204ENST00000547951 USP17L19D6RCP7 530 aa25.83■■□□□ 1.73
USP44-204ENST00000547951 USP17L20D6RJB6 530 aa25.83■■□□□ 1.73
USP44-204ENST00000547951 CYP2B6P20813 491 aa25.83■■□□□ 1.73
USP44-204ENST00000547951 USP17L24Q0WX57 530 aa25.83■■□□□ 1.73
USP44-204ENST00000547951 CATSPERGQ6ZRH7 1159 aa25.83■■□□□ 1.73
USP44-204ENST00000547951 TRIB2Q92519 343 aa25.83■■□□□ 1.73
USP44-204ENST00000547951 ATP8A2Q9NTI2 1148 aa25.83■■□□□ 1.73
USP44-204ENST00000547951 USP17L12C9JPN9 530 aa25.82■■□□□ 1.72
USP44-204ENST00000547951 USP17L21D6R901 530 aa25.82■■□□□ 1.72
USP44-204ENST00000547951 H0YGN5 161 aa25.82■■□□□ 1.72
USP44-204ENST00000547951 AKR1B1P15121 316 aa25.82■■□□□ 1.72
USP44-204ENST00000547951 USP14P54578 494 aa25.82■■□□□ 1.72
USP44-204ENST00000547951 C12orf60Q5U649 245 aa25.82■■□□□ 1.72
USP44-204ENST00000547951 SIAH1Q8IUQ4 282 aa25.82■■□□□ 1.72
USP44-204ENST00000547951 RPAP3Q9H6T3 665 aaPredicted RBP25.82■■□□□ 1.72
USP44-204ENST00000547951 SLC4A4Q9Y6R1 1079 aa25.82■■□□□ 1.72
USP44-204ENST00000547951 RLFQ13129 1914 aa25.81■■□□□ 1.72
USP44-204ENST00000547951 FARP2O94887 1054 aaPredicted RBP25.81■■□□□ 1.72
USP44-204ENST00000547951 HMGCRP04035 888 aa25.81■■□□□ 1.72
USP44-204ENST00000547951 OTUD7AQ8TE49 926 aaPredicted RBP25.81■■□□□ 1.72
USP44-204ENST00000547951 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.81■■□□□ 1.72
USP44-204ENST00000547951 RRP1P56182 461 aaKnown RBP25.8■■□□□ 1.72
USP44-204ENST00000547951 GPR142Q7Z601 462 aa25.8■■□□□ 1.72
USP44-204ENST00000547951 USP6NLQ92738 828 aa25.8■■□□□ 1.72
USP44-204ENST00000547951 BTBD7Q9P203 1132 aa25.8■■□□□ 1.72
USP44-204ENST00000547951 SWAP70Q9UH65 585 aa25.8■■□□□ 1.72
USP44-204ENST00000547951 SPDYE16A6NNV3 312 aaPredicted RBP25.79■■□□□ 1.72
USP44-204ENST00000547951 TFRCP02786 760 aaKnown RBP25.79■■□□□ 1.72
USP44-204ENST00000547951 MAPK4P31152 587 aa25.79■■□□□ 1.72
USP44-204ENST00000547951 CDK8P49336 464 aa25.79■■□□□ 1.72
USP44-204ENST00000547951 CCL14Q16627 93 aa25.79■■□□□ 1.72
USP44-204ENST00000547951 NUDT12Q9BQG2 462 aa25.79■■□□□ 1.72
USP44-204ENST00000547951 CRISPLD2Q9H0B8 497 aa25.79■■□□□ 1.72
USP44-204ENST00000547951 RABGAP1Q9Y3P9 1069 aa25.79■■□□□ 1.72
USP44-204ENST00000547951 HABP4Q5JVS0 413 aaKnown RBP25.78■■□□□ 1.72
USP44-204ENST00000547951 MORN1Q5T089 497 aa25.78■■□□□ 1.72
USP44-204ENST00000547951 ZSCAN25Q6NSZ9 544 aa25.78■■□□□ 1.72
USP44-204ENST00000547951 CTR9Q6PD62 1173 aa25.78■■□□□ 1.72
USP44-204ENST00000547951 TMEM179Q6ZVK1 233 aa25.78■■□□□ 1.72
USP44-204ENST00000547951 KBTBD3Q8NAB2 608 aa25.78■■□□□ 1.72
USP44-204ENST00000547951 GTF3C2Q8WUA4 911 aaPredicted RBP25.78■■□□□ 1.72
USP44-204ENST00000547951 OSBP2Q969R2 916 aa25.78■■□□□ 1.72
USP44-204ENST00000547951 STRBPQ96SI9 672 aaKnown RBP25.78■■□□□ 1.72
USP44-204ENST00000547951 TRIOBPQ9H2D6 2365 aa25.77■■□□□ 1.72
USP44-204ENST00000547951 C16orf86Q6ZW13 317 aa25.77■■□□□ 1.72
USP44-204ENST00000547951 PLEKHH3Q7Z736 793 aa25.77■■□□□ 1.72
USP44-204ENST00000547951 DIS3LQ8TF46 1054 aaKnown RBP25.77■■□□□ 1.72
USP44-204ENST00000547951 DPF3Q92784 378 aa25.77■■□□□ 1.72
USP44-204ENST00000547951 ALPK3Q96L96 1907 aa25.76■■□□□ 1.72
USP44-204ENST00000547951 CCAR1Q8IX12 1150 aaKnown RBP25.76■■□□□ 1.71
USP44-204ENST00000547951 SOCS4Q8WXH5 440 aa25.76■■□□□ 1.71
USP44-204ENST00000547951 CRBNQ96SW2 442 aa25.76■■□□□ 1.71
USP44-204ENST00000547951 COLQQ9Y215 455 aaPredicted RBP25.76■■□□□ 1.71
USP44-204ENST00000547951 RANBP2P49792 3224 aaKnown RBP25.76■■□□□ 1.71
USP44-204ENST00000547951 PARP14Q460N5 1801 aa25.75■■□□□ 1.71
USP44-204ENST00000547951 A0A0G2JMZ2 1700 aa25.75■■□□□ 1.71
USP44-204ENST00000547951 GSG1L2A8MUP6 293 aa25.75■■□□□ 1.71
USP44-204ENST00000547951 ICA1Q05084 483 aa25.75■■□□□ 1.71
USP44-204ENST00000547951 MAP3K21Q5TCX8 1036 aa25.75■■□□□ 1.71
USP44-204ENST00000547951 LBX2Q6XYB7 198 aa25.75■■□□□ 1.71
USP44-204ENST00000547951 SPICE1Q8N0Z3 855 aa25.75■■□□□ 1.71
USP44-204ENST00000547951 GCC1Q96CN9 775 aa25.75■■□□□ 1.71
USP44-204ENST00000547951 GPATCH3Q96I76 525 aa25.75■■□□□ 1.71
USP44-204ENST00000547951 RPTORQ8N122 1335 aa25.74■■□□□ 1.71
USP44-204ENST00000547951 M0R2C6 588 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms