RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 SCARA3Q6AZY7 606 aa6.55□□□□□ -1.36
CBX5-203ENST00000547872 TMEM87AQ8NBN3 555 aa6.55□□□□□ -1.36
CBX5-203ENST00000547872 ATXN3LQ9H3M9 355 aa6.55□□□□□ -1.36
CBX5-203ENST00000547872 SEMA6BQ9H3T3 888 aa6.55□□□□□ -1.36
CBX5-203ENST00000547872 PIDD1Q9HB75 910 aa6.55□□□□□ -1.36
CBX5-203ENST00000547872 PPP1R9AQ9ULJ8 1098 aa6.55□□□□□ -1.36
CBX5-203ENST00000547872 ACTL7BQ9Y614 415 aa6.55□□□□□ -1.36
CBX5-203ENST00000547872 EIF2AK4Q9P2K8 1649 aaKnown RBP6.54□□□□□ -1.36
CBX5-203ENST00000547872 ATF3P18847 181 aa6.54□□□□□ -1.36
CBX5-203ENST00000547872 RAB6AP20340 208 aa6.54□□□□□ -1.36
CBX5-203ENST00000547872 MAP4P27816 1152 aaKnown RBP6.54□□□□□ -1.36
CBX5-203ENST00000547872 TSNAXIP1Q2TAA8 658 aa6.54□□□□□ -1.36
CBX5-203ENST00000547872 DIEXFQ68CQ4 756 aaKnown RBP6.54□□□□□ -1.36
CBX5-203ENST00000547872 MPRIPQ6WCQ1 1025 aa6.54□□□□□ -1.36
CBX5-203ENST00000547872 BEND4Q6ZU67 534 aa6.54□□□□□ -1.36
CBX5-203ENST00000547872 CLEC10AQ8IUN9 316 aa6.54□□□□□ -1.36
CBX5-203ENST00000547872 RELL1Q8IUW5 271 aa6.54□□□□□ -1.36
CBX5-203ENST00000547872 FBLIM1Q8WUP2 373 aa6.54□□□□□ -1.36
CBX5-203ENST00000547872 PICK1Q9NRD5 415 aa6.54□□□□□ -1.36
CBX5-203ENST00000547872 PCDHA4Q9UN74 947 aa6.54□□□□□ -1.36
CBX5-203ENST00000547872 MYO5BQ9ULV0 1848 aa6.54□□□□□ -1.36
CBX5-203ENST00000547872 GCC2Q8IWJ2 1684 aa6.54□□□□□ -1.36
CBX5-203ENST00000547872 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.53□□□□□ -1.36
CBX5-203ENST00000547872 PWP1Q13610 501 aa6.53□□□□□ -1.36
CBX5-203ENST00000547872 CDPF1Q6NVV7 123 aa6.53□□□□□ -1.36
CBX5-203ENST00000547872 AGMOQ6ZNB7 445 aa6.53□□□□□ -1.36
CBX5-203ENST00000547872 DEFB132Q7Z7B7 95 aa6.53□□□□□ -1.36
CBX5-203ENST00000547872 ELMO3Q96BJ8 720 aa6.53□□□□□ -1.36
CBX5-203ENST00000547872 FAM83CQ9BQN1 747 aa6.53□□□□□ -1.36
CBX5-203ENST00000547872 MIR1-1HGQ9H1L0 117 aa6.53□□□□□ -1.36
CBX5-203ENST00000547872 C7orf69Q9H7B7 122 aa6.53□□□□□ -1.36
CBX5-203ENST00000547872 FAM105AQ9NUU6 356 aa6.53□□□□□ -1.36
CBX5-203ENST00000547872 CRIM1Q9NZV1 1036 aa6.53□□□□□ -1.36
CBX5-203ENST00000547872 ADGRB3O60242 1522 aa6.53□□□□□ -1.36
CBX5-203ENST00000547872 ASXL1Q8IXJ9 1541 aa6.53□□□□□ -1.36
CBX5-203ENST00000547872 LRP5O75197 1615 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 NHSL1Q5SYE7 1610 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 FAM95CA0A1B0GW59 222 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 GSC2O15499 205 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 TSPY4P0CV99 314 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 TSPY10P0CW01 314 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 GBP2P32456 591 aaPredicted RBP6.52□□□□□ -1.37
CBX5-203ENST00000547872 SEPT6Q14141 434 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 MAP7Q14244 749 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 NFKBIBQ15653 356 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 PAOXQ6QHF9 649 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 BRINP3Q76B58 766 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 TRIM42Q8IWZ5 723 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 MRRFQ96E11 262 aaKnown RBP6.52□□□□□ -1.37
CBX5-203ENST00000547872 FANCD2OSQ96PS1 177 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 RSRP1Q9BUV0 290 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 BACH2Q9BYV9 841 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 CACNA2D2Q9NY47 1150 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 TLR6Q9Y2C9 796 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 PCDHGC5Q9Y5F6 944 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 CHD2O14647 1828 aaKnown RBP6.52□□□□□ -1.37
CBX5-203ENST00000547872 TET3O43151 1660 aa6.52□□□□□ -1.37
CBX5-203ENST00000547872 HMX2A2RU54 273 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 DCDC2CA8MYV0 355 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 F6X3S4 739 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 RNGTTO60942 597 aaKnown RBP6.51□□□□□ -1.37
CBX5-203ENST00000547872 TFE3P19532 575 aaPredicted RBP6.51□□□□□ -1.37
CBX5-203ENST00000547872 FSTP19883 344 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 VAMP1P23763 118 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 YY1P25490 414 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 ERVK-24P63145 666 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 TTLL4Q14679 1199 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 ZC3H12AQ5D1E8 599 aaKnown RBP6.51□□□□□ -1.37
CBX5-203ENST00000547872 HS2ST1Q7LGA3 356 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 PHC3Q8NDX5 983 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 GAL3ST3Q96A11 431 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 GSX1Q9H4S2 264 aaPredicted RBP6.51□□□□□ -1.37
CBX5-203ENST00000547872 GGT7Q9UJ14 662 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 DAGLAQ9Y4D2 1042 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 PCDHB5Q9Y5E4 795 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 CSADQ9Y600 493 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 SRCAPQ6ZRS2 3230 aa6.51□□□□□ -1.37
CBX5-203ENST00000547872 ARHGEF5Q12774 1597 aa6.5□□□□□ -1.37
CBX5-203ENST00000547872 ADAM23O75077 832 aa6.5□□□□□ -1.37
CBX5-203ENST00000547872 NFICP08651 508 aa6.5□□□□□ -1.37
CBX5-203ENST00000547872 HCLS1P14317 486 aaPredicted RBP6.5□□□□□ -1.37
CBX5-203ENST00000547872 ZNF76P36508 570 aa6.5□□□□□ -1.37
CBX5-203ENST00000547872 HDXQ7Z353 690 aa6.5□□□□□ -1.37
CBX5-203ENST00000547872 EZH1Q92800 747 aaPredicted RBP6.5□□□□□ -1.37
CBX5-203ENST00000547872 TMEM74Q96NL1 305 aa6.5□□□□□ -1.37
CBX5-203ENST00000547872 ACSS3Q9H6R3 686 aa6.5□□□□□ -1.37
CBX5-203ENST00000547872 SSU72Q9NP77 194 aaKnown RBP6.5□□□□□ -1.37
CBX5-203ENST00000547872 DISC1Q9NRI5 854 aa6.5□□□□□ -1.37
CBX5-203ENST00000547872 PNPLA6Q8IY17 1366 aa6.49□□□□□ -1.37
CBX5-203ENST00000547872 PRAMEF27A3QJZ7 478 aa6.49□□□□□ -1.37
CBX5-203ENST00000547872 MINDY4BA8MYZ0 360 aa6.49□□□□□ -1.37
CBX5-203ENST00000547872 RECKO95980 971 aa6.49□□□□□ -1.37
CBX5-203ENST00000547872 IGLV1-40P01703 118 aa6.49□□□□□ -1.37
CBX5-203ENST00000547872 LMNB2Q03252 620 aa6.49□□□□□ -1.37
CBX5-203ENST00000547872 PTPN11Q06124 597 aaPredicted RBP6.49□□□□□ -1.37
CBX5-203ENST00000547872 CAMK2GQ13555 558 aaPredicted RBP6.49□□□□□ -1.37
CBX5-203ENST00000547872 PPM1JQ5JR12 505 aa6.49□□□□□ -1.37
CBX5-203ENST00000547872 PRSS36Q5K4E3 855 aa6.49□□□□□ -1.37
CBX5-203ENST00000547872 WIPI1Q5MNZ9 446 aaPredicted RBP6.49□□□□□ -1.37
CBX5-203ENST00000547872 RNF43Q68DV7 783 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms