RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 WBP1LQ9NX94 342 aa9.45□□□□□ -0.9
CCDC65-203ENST00000547861 JAG2Q9Y219 1238 aa9.45□□□□□ -0.9
CCDC65-203ENST00000547861 BAZ2BQ9UIF8 2168 aaKnown RBP9.44□□□□□ -0.9
CCDC65-203ENST00000547861 TRPM7Q96QT4 1865 aa9.44□□□□□ -0.9
CCDC65-203ENST00000547861 DHX16O60231 1041 aaKnown RBP9.44□□□□□ -0.9
CCDC65-203ENST00000547861 RAD17O75943 681 aa9.44□□□□□ -0.9
CCDC65-203ENST00000547861 UFL1O94874 794 aa9.44□□□□□ -0.9
CCDC65-203ENST00000547861 GMPSP49915 693 aaPredicted RBP9.44□□□□□ -0.9
CCDC65-203ENST00000547861 METAP2P50579 478 aaKnown RBP eCLIP9.44□□□□□ -0.9
CCDC65-203ENST00000547861 TMEM67Q5HYA8 995 aa9.44□□□□□ -0.9
CCDC65-203ENST00000547861 RRP12Q5JTH9 1297 aaKnown RBP9.44□□□□□ -0.9
CCDC65-203ENST00000547861 CCDC183Q5T5S1 534 aa9.44□□□□□ -0.9
CCDC65-203ENST00000547861 ZNF804AQ7Z570 1209 aa9.44□□□□□ -0.9
CCDC65-203ENST00000547861 ZSCAN16Q9H4T2 348 aaPredicted RBP9.44□□□□□ -0.9
CCDC65-203ENST00000547861 PRDM10Q9NQV6 1147 aa9.44□□□□□ -0.9
CCDC65-203ENST00000547861 ADARB2Q9NS39 739 aaKnown RBP9.44□□□□□ -0.9
CCDC65-203ENST00000547861 GPRC5DQ9NZD1 345 aa9.44□□□□□ -0.9
CCDC65-203ENST00000547861 ANAPC4Q9UJX5 808 aa9.44□□□□□ -0.9
CCDC65-203ENST00000547861 MYH4Q9Y623 1939 aa9.43□□□□□ -0.9
CCDC65-203ENST00000547861 SMIM22K7EJ46 135 aa9.43□□□□□ -0.9
CCDC65-203ENST00000547861 RXRAP19793 462 aa9.43□□□□□ -0.9
CCDC65-203ENST00000547861 LIFRP42702 1097 aa9.43□□□□□ -0.9
CCDC65-203ENST00000547861 LBX1P52954 281 aa9.43□□□□□ -0.9
CCDC65-203ENST00000547861 GUCY1B3Q02153 619 aa9.43□□□□□ -0.9
CCDC65-203ENST00000547861 KIAA2012Q0VF49 1180 aa9.43□□□□□ -0.9
CCDC65-203ENST00000547861 GRM1Q13255 1194 aa9.43□□□□□ -0.9
CCDC65-203ENST00000547861 CIAPIN1Q6FI81 312 aa9.43□□□□□ -0.9
CCDC65-203ENST00000547861 PAXIP1Q6ZW49 1069 aaPredicted RBP9.43□□□□□ -0.9
CCDC65-203ENST00000547861 MICU3Q86XE3 530 aa9.43□□□□□ -0.9
CCDC65-203ENST00000547861 TDRD7Q8NHU6 1098 aaKnown RBP9.43□□□□□ -0.9
CCDC65-203ENST00000547861 LEO1Q8WVC0 666 aaPredicted RBP9.43□□□□□ -0.9
CCDC65-203ENST00000547861 SPATA32Q96LK8 384 aa9.43□□□□□ -0.9
CCDC65-203ENST00000547861 SCAND2PQ9GZW5 306 aaPredicted RBP9.43□□□□□ -0.9
CCDC65-203ENST00000547861 RNF41Q9H4P4 317 aaPredicted RBP9.43□□□□□ -0.9
CCDC65-203ENST00000547861 TOMM22Q9NS69 142 aa9.43□□□□□ -0.9
CCDC65-203ENST00000547861 ZSWIM5Q9P217 1185 aa9.43□□□□□ -0.9
CCDC65-203ENST00000547861 ORC3Q9UBD5 711 aaPredicted RBP9.43□□□□□ -0.9
CCDC65-203ENST00000547861 CYP2D7A0A087X1C5 515 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 GOLGA8AA7E2F4 631 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 MINDY4BA8MYZ0 360 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 CPLX1O14810 134 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 IFIT3O14879 490 aaKnown RBP9.42□□□□□ -0.9
CCDC65-203ENST00000547861 SIPA1L1O43166 1804 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 ZBTB43O43298 467 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 ATP2B4P23634 1241 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 CDC27P30260 824 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 CST9Q5W186 159 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 SPTY2D1Q68D10 685 aaPredicted RBP9.42□□□□□ -0.9
CCDC65-203ENST00000547861 GIMAP6Q6P9H5 292 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 TMED8Q6PL24 325 aaPredicted RBP9.42□□□□□ -0.9
CCDC65-203ENST00000547861 NFXL1Q6ZNB6 911 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 DZIP1Q86YF9 867 aaKnown RBP9.42□□□□□ -0.9
CCDC65-203ENST00000547861 STK11IPQ8N1F8 1099 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 MYL10Q9BUA6 226 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 CRNKL1Q9BZJ0 848 aaKnown RBP9.42□□□□□ -0.9
CCDC65-203ENST00000547861 RBSNQ9H1K0 784 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 AATFQ9NY61 560 aaKnown RBP eCLIP9.42□□□□□ -0.9
CCDC65-203ENST00000547861 GGA1Q9UJY5 639 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 ADD1P35611 737 aaKnown RBP9.42□□□□□ -0.9
CCDC65-203ENST00000547861 NASPP49321 788 aaPredicted RBP9.42□□□□□ -0.9
CCDC65-203ENST00000547861 PLCB2Q00722 1185 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 MAP2K1Q02750 393 aaPredicted RBP9.42□□□□□ -0.9
CCDC65-203ENST00000547861 WTAPQ15007 396 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 TNIP1Q15025 636 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 CYP4F22Q6NT55 531 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 WDR66Q8TBY9 1149 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 C8orf76Q96K31 380 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 CAPNS2Q96L46 248 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 ZKSCAN3Q9BRR0 538 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 MTA3Q9BTC8 594 aa9.42□□□□□ -0.9
CCDC65-203ENST00000547861 GLIS2Q9BZE0 524 aaPredicted RBP9.42□□□□□ -0.9
CCDC65-203ENST00000547861 TFIP11Q9UBB9 837 aaKnown RBP9.42□□□□□ -0.9
CCDC65-203ENST00000547861 GREB1LQ9C091 1923 aaPredicted RBP9.41□□□□□ -0.9
CCDC65-203ENST00000547861 STK36Q9NRP7 1315 aa9.41□□□□□ -0.9
CCDC65-203ENST00000547861 SHTN1A0MZ66 631 aa9.41□□□□□ -0.9
CCDC65-203ENST00000547861 CCDC69A6NI79 296 aa9.41□□□□□ -0.9
CCDC65-203ENST00000547861 YDJCA8MPS7 323 aa9.41□□□□□ -0.9
CCDC65-203ENST00000547861 RANBP6O60518 1105 aaKnown RBP9.41□□□□□ -0.9
CCDC65-203ENST00000547861 CDKL5O76039 1030 aa9.41□□□□□ -0.9
CCDC65-203ENST00000547861 LDHBP07195 334 aaKnown RBP9.41□□□□□ -0.9
CCDC65-203ENST00000547861 HSPA8P11142 646 aaKnown RBP9.41□□□□□ -0.9
CCDC65-203ENST00000547861 CDK11BP21127 795 aaKnown RBP9.41□□□□□ -0.9
CCDC65-203ENST00000547861 HIRAP54198 1017 aaPredicted RBP9.41□□□□□ -0.9
CCDC65-203ENST00000547861 SART3Q15020 963 aaKnown RBP9.41□□□□□ -0.9
CCDC65-203ENST00000547861 NTRK3Q16288 839 aa9.41□□□□□ -0.9
CCDC65-203ENST00000547861 GRIK5Q16478 980 aa9.41□□□□□ -0.9
CCDC65-203ENST00000547861 ARSIQ5FYB1 569 aa9.41□□□□□ -0.9
CCDC65-203ENST00000547861 OTUD7BQ6GQQ9 843 aa9.41□□□□□ -0.9
CCDC65-203ENST00000547861 CTR9Q6PD62 1173 aa9.41□□□□□ -0.9
CCDC65-203ENST00000547861 TMC4Q7Z404 712 aa9.41□□□□□ -0.9
CCDC65-203ENST00000547861 CCDC144CPQ8IYA2 1237 aa9.41□□□□□ -0.9
CCDC65-203ENST00000547861 TRPM4Q8TD43 1214 aa9.41□□□□□ -0.9
CCDC65-203ENST00000547861 FTOQ9C0B1 505 aaKnown RBP eCLIP9.41□□□□□ -0.9
CCDC65-203ENST00000547861 TSPY26PQ9H489 355 aa9.41□□□□□ -0.9
CCDC65-203ENST00000547861 DCP1AQ9NPI6 582 aaPredicted RBP9.41□□□□□ -0.9
CCDC65-203ENST00000547861 FAM217BQ9NTX9 383 aaPredicted RBP9.41□□□□□ -0.9
CCDC65-203ENST00000547861 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.41□□□□□ -0.9
CCDC65-203ENST00000547861 ROBO3Q96MS0 1386 aa9.4□□□□□ -0.9
CCDC65-203ENST00000547861 MROH7-TTC4A0A0A0MT08 1334 aa9.4□□□□□ -0.9
CCDC65-203ENST00000547861 TNKSO95271 1327 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms