RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 RAET1EQ8TD07 263 aa12.45□□□□□ -0.42
BEST3-208ENST00000547208 P2RX7Q99572 595 aaKnown RBP12.45□□□□□ -0.42
BEST3-208ENST00000547208 PUS7LQ9H0K6 701 aaKnown RBP12.45□□□□□ -0.42
BEST3-208ENST00000547208 TMOD4Q9NZQ9 345 aa12.45□□□□□ -0.42
BEST3-208ENST00000547208 MORF4L1Q9UBU8 362 aa12.45□□□□□ -0.42
BEST3-208ENST00000547208 FRMPD3Q5JV73 1810 aa12.45□□□□□ -0.42
BEST3-208ENST00000547208 RANBP2P49792 3224 aaKnown RBP12.45□□□□□ -0.42
BEST3-208ENST00000547208 SPDYE4A6NLX3 237 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 TNPO2O14787 897 aaKnown RBP12.44□□□□□ -0.42
BEST3-208ENST00000547208 PEX10O60683 326 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 FLT3LGP49771 235 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 HERVK_113P62684 666 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 IRF5Q13568 498 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 RAB3GAP1Q15042 981 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 USP17L2Q6R6M4 530 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 KBTBD3Q8NAB2 608 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 SLC44A5Q8NCS7 719 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 ACER1Q8TDN7 264 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 SHISA4Q96DD7 197 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 CRBNQ96SW2 442 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 TMEM106CQ9BVX2 250 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 KIAA1683Q9H0B3 1180 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 TXNRD2Q9NNW7 524 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 ATP8A2Q9NTI2 1148 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 ALPK3Q96L96 1907 aa12.44□□□□□ -0.42
BEST3-208ENST00000547208 SALL3Q9BXA9 1300 aa12.43□□□□□ -0.42
BEST3-208ENST00000547208 H0YGN5 161 aa12.43□□□□□ -0.42
BEST3-208ENST00000547208 IRX3P78415 501 aaPredicted RBP12.43□□□□□ -0.42
BEST3-208ENST00000547208 SEPT2Q15019 361 aa12.43□□□□□ -0.42
BEST3-208ENST00000547208 C12orf60Q5U649 245 aa12.43□□□□□ -0.42
BEST3-208ENST00000547208 SLAIN1Q8ND83 568 aa12.43□□□□□ -0.42
BEST3-208ENST00000547208 PI4K2BQ8TCG2 481 aa12.43□□□□□ -0.42
BEST3-208ENST00000547208 OTUD7AQ8TE49 926 aaPredicted RBP12.43□□□□□ -0.42
BEST3-208ENST00000547208 PXYLP1Q8TE99 480 aa12.43□□□□□ -0.42
BEST3-208ENST00000547208 DYNLL2Q96FJ2 89 aa12.43□□□□□ -0.42
BEST3-208ENST00000547208 YTHDC1Q96MU7 727 aaKnown RBP12.43□□□□□ -0.42
BEST3-208ENST00000547208 RBPJLQ9UBG7 517 aa12.43□□□□□ -0.42
BEST3-208ENST00000547208 TAOK2Q9UL54 1235 aa12.43□□□□□ -0.42
BEST3-208ENST00000547208 ZNFX1Q9P2E3 1918 aaKnown RBP12.43□□□□□ -0.42
BEST3-208ENST00000547208 CYP2D7A0A087X1C5 515 aa12.42□□□□□ -0.42
BEST3-208ENST00000547208 A0A1W2PRG0 241 aa12.42□□□□□ -0.42
BEST3-208ENST00000547208 ADCY3O60266 1144 aa12.42□□□□□ -0.42
BEST3-208ENST00000547208 ELNP15502 786 aa12.42□□□□□ -0.42
BEST3-208ENST00000547208 VCAM1P19320 739 aa12.42□□□□□ -0.42
BEST3-208ENST00000547208 ZYXQ15942 572 aaKnown RBP12.42□□□□□ -0.42
BEST3-208ENST00000547208 ZSCAN25Q6NSZ9 544 aa12.42□□□□□ -0.42
BEST3-208ENST00000547208 STRBPQ96SI9 672 aaKnown RBP12.42□□□□□ -0.42
BEST3-208ENST00000547208 CABP5Q9NP86 173 aa12.42□□□□□ -0.42
BEST3-208ENST00000547208 SWAP70Q9UH65 585 aa12.42□□□□□ -0.42
BEST3-208ENST00000547208 GJD2Q9UKL4 321 aa12.42□□□□□ -0.42
BEST3-208ENST00000547208 ZNF236Q9UL36 1845 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 TTC41PQ6P2S7 1318 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 USP17L12C9JPN9 530 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 USP17L21D6R901 530 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 CCL5P13501 91 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 AKR1B1P15121 316 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 Q3C1V9 767 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 CTR9Q6PD62 1173 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 CATSPERGQ6ZRH7 1159 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 SIAH1Q8IUQ4 282 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 APPBP2Q92624 585 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 OSBP2Q969R2 916 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 COA7Q96BR5 231 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 GCC1Q96CN9 775 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 GPATCH3Q96I76 525 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 FEZ1Q99689 392 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 SLC4A4Q9Y6R1 1079 aa12.41□□□□□ -0.42
BEST3-208ENST00000547208 GSG1L2A8MUP6 293 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 USP17L15C9J2P7 530 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 USP17L13C9JLJ4 530 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 USP17L11C9JVI0 530 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 USP17L18D6R9N7 530 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 USP17L22D6RA61 530 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 USP17L17D6RBQ6 530 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 USP17L19D6RCP7 530 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 USP17L20D6RJB6 530 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 RNF113AO15541 343 aaKnown RBP12.4□□□□□ -0.42
BEST3-208ENST00000547208 CNMDO75829 334 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 INHAP05111 366 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 GJB1P08034 283 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 GJA8P48165 433 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 USP14P54578 494 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 ERVK-9P63128 1117 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 ERVK-24P63145 666 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 USP17L24Q0WX57 530 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 KIAA1755Q5JYT7 1200 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 TMEM179Q6ZVK1 233 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 C16orf86Q6ZW13 317 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 UBE2Q1Q7Z7E8 422 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 CLEC10AQ8IUN9 316 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 GPRC5AQ8NFJ5 357 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 UNC93B1Q9H1C4 597 aa12.4□□□□□ -0.42
BEST3-208ENST00000547208 M0R2C6 588 aa12.39□□□□□ -0.43
BEST3-208ENST00000547208 MPHOSPH10O00566 681 aaKnown RBP12.39□□□□□ -0.43
BEST3-208ENST00000547208 MX1P20591 662 aa12.39□□□□□ -0.43
BEST3-208ENST00000547208 CDK8P49336 464 aa12.39□□□□□ -0.43
BEST3-208ENST00000547208 UBXN2AP68543 259 aa12.39□□□□□ -0.43
BEST3-208ENST00000547208 HDAC1Q13547 482 aaPredicted RBP12.39□□□□□ -0.43
BEST3-208ENST00000547208 CHRDL2Q6WN34 429 aa12.39□□□□□ -0.43
BEST3-208ENST00000547208 LBX2Q6XYB7 198 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms