RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 NKX2-3Q8TAU0 364 aa18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 CEP95Q96GE4 821 aa18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 NYAP2Q9P242 653 aa18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 SYNPO2Q9UMS6 1093 aa18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 STX8Q9UNK0 236 aa18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 KLF18A0A0U1RQI7 1052 aa18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 GDF11O95390 407 aa18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 GH2P01242 217 aa18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 POTEIP0CG38 1075 aa18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 POTEJP0CG39 1038 aa18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 TOP1P11387 765 aaKnown RBP18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 NOVP48745 357 aa18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 PPP2R5BQ15173 497 aa18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 MAP1SQ66K74 1059 aaPredicted RBP18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 CHADLQ6NUI6 762 aa18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 KLRG1Q96E93 195 aa18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 TMX3Q96JJ7 454 aa18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 ZBTB21Q9ULJ3 1066 aa18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 TPCN1Q9ULQ1 816 aa18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 NAP1L2Q9ULW6 460 aaPredicted RBP18.54■□□□□ 0.56
TRAFD1-203ENST00000547063 SSC5DA1L4H1 1573 aa18.53■□□□□ 0.56
TRAFD1-203ENST00000547063 DHX16O60231 1041 aaKnown RBP18.53■□□□□ 0.56
TRAFD1-203ENST00000547063 NMT2O60551 498 aa18.53■□□□□ 0.56
TRAFD1-203ENST00000547063 DDAH1O94760 285 aa18.53■□□□□ 0.56
TRAFD1-203ENST00000547063 SLURP2P0DP57 97 aa18.53■□□□□ 0.56
TRAFD1-203ENST00000547063 ICA1Q05084 483 aa18.53■□□□□ 0.56
TRAFD1-203ENST00000547063 RAB3GAP1Q15042 981 aa18.53■□□□□ 0.56
TRAFD1-203ENST00000547063 RCSD1Q6JBY9 416 aa18.53■□□□□ 0.56
TRAFD1-203ENST00000547063 APOA5Q6Q788 366 aa18.53■□□□□ 0.56
TRAFD1-203ENST00000547063 IPO9Q96P70 1041 aaKnown RBP18.53■□□□□ 0.56
TRAFD1-203ENST00000547063 WRNIP1Q96S55 665 aa18.53■□□□□ 0.56
TRAFD1-203ENST00000547063 SLKQ9H2G2 1235 aaPredicted RBP18.53■□□□□ 0.56
TRAFD1-203ENST00000547063 SH2D4AQ9H788 454 aa18.53■□□□□ 0.56
TRAFD1-203ENST00000547063 ARHGEF10LQ9HCE6 1279 aa18.53■□□□□ 0.56
TRAFD1-203ENST00000547063 GPHNQ9NQX3 736 aaPredicted RBP18.53■□□□□ 0.56
TRAFD1-203ENST00000547063 CCDC196A0A1B0GTZ2 297 aa18.52■□□□□ 0.56
TRAFD1-203ENST00000547063 UNCXA6NJT0 531 aa18.52■□□□□ 0.56
TRAFD1-203ENST00000547063 GOLGA8BA8MQT2 603 aa18.52■□□□□ 0.56
TRAFD1-203ENST00000547063 ZBTB43O43298 467 aa18.52■□□□□ 0.56
TRAFD1-203ENST00000547063 HSP90AA1P07900 732 aaKnown RBP18.52■□□□□ 0.56
TRAFD1-203ENST00000547063 SEPT2Q15019 361 aa18.52■□□□□ 0.56
TRAFD1-203ENST00000547063 ARMC9Q7Z3E5 817 aa18.52■□□□□ 0.56
TRAFD1-203ENST00000547063 SCYL3Q8IZE3 742 aa18.52■□□□□ 0.56
TRAFD1-203ENST00000547063 ZNF654Q8IZM8 581 aa18.52■□□□□ 0.56
TRAFD1-203ENST00000547063 MAP3K14Q99558 947 aa18.52■□□□□ 0.56
TRAFD1-203ENST00000547063 PICK1Q9NRD5 415 aa18.52■□□□□ 0.56
TRAFD1-203ENST00000547063 ATAD5Q96QE3 1844 aa18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 PFKFB2O60825 505 aa18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 USP2O75604 605 aaPredicted RBP18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 PDIA3P30101 505 aaKnown RBP18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 FKBP1BP68106 108 aa18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 RRP1BQ14684 758 aaKnown RBP18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 MAP3K11Q16584 847 aa18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 ME3Q16798 604 aa18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 NOL9Q5SY16 702 aaKnown RBP18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 PNMA1Q8ND90 353 aa18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 MKL1Q969V6 931 aa18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 TMEM47Q9BQJ4 181 aa18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 LARP6Q9BRS8 491 aaKnown RBP18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 CLIP2Q9UDT6 1046 aa18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 BRPF3Q9ULD4 1205 aa18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 CSADQ9Y600 493 aa18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 DOCK1Q14185 1865 aa18.51■□□□□ 0.55
TRAFD1-203ENST00000547063 USP17L5A8MUK1 530 aa18.5■□□□□ 0.55
TRAFD1-203ENST00000547063 GUCY1A2P33402 732 aa18.5■□□□□ 0.55
TRAFD1-203ENST00000547063 METAP2P50579 478 aaKnown RBP eCLIP18.5■□□□□ 0.55
TRAFD1-203ENST00000547063 MAP3K9P80192 1104 aa18.5■□□□□ 0.55
TRAFD1-203ENST00000547063 TTLL12Q14166 644 aaPredicted RBP18.5■□□□□ 0.55
TRAFD1-203ENST00000547063 CPLX2Q6PUV4 134 aaKnown RBP18.5■□□□□ 0.55
TRAFD1-203ENST00000547063 INTS4Q96HW7 963 aaKnown RBP18.5■□□□□ 0.55
TRAFD1-203ENST00000547063 AS3MTQ9HBK9 375 aa18.5■□□□□ 0.55
TRAFD1-203ENST00000547063 MYH4Q9Y623 1939 aa18.49■□□□□ 0.55
TRAFD1-203ENST00000547063 GOLGA8AA7E2F4 631 aa18.49■□□□□ 0.55
TRAFD1-203ENST00000547063 EEF2P13639 858 aaKnown RBP18.49■□□□□ 0.55
TRAFD1-203ENST00000547063 INPP5BP32019 993 aa18.49■□□□□ 0.55
TRAFD1-203ENST00000547063 KIF5BP33176 963 aa18.49■□□□□ 0.55
TRAFD1-203ENST00000547063 ATP2B2Q01814 1243 aa18.49■□□□□ 0.55
TRAFD1-203ENST00000547063 CUL4AQ13619 759 aa18.49■□□□□ 0.55
TRAFD1-203ENST00000547063 MICU3Q86XE3 530 aa18.49■□□□□ 0.55
TRAFD1-203ENST00000547063 ANKRD13AQ8IZ07 590 aa18.49■□□□□ 0.55
TRAFD1-203ENST00000547063 CTCFLQ8NI51 663 aaPredicted RBP18.49■□□□□ 0.55
TRAFD1-203ENST00000547063 GTF3C6Q969F1 213 aa18.49■□□□□ 0.55
TRAFD1-203ENST00000547063 SENP2Q9HC62 589 aa18.49■□□□□ 0.55
TRAFD1-203ENST00000547063 RBM28Q9NW13 759 aaKnown RBP18.49■□□□□ 0.55
TRAFD1-203ENST00000547063 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.49■□□□□ 0.55
TRAFD1-203ENST00000547063 NID2Q14112 1375 aa18.49■□□□□ 0.55
TRAFD1-203ENST00000547063 TROAPQ12815 778 aa18.48■□□□□ 0.55
TRAFD1-203ENST00000547063 STK3Q13188 491 aa18.48■□□□□ 0.55
TRAFD1-203ENST00000547063 PRKG1Q13976 671 aa18.48■□□□□ 0.55
TRAFD1-203ENST00000547063 FANCBQ8NB91 859 aa18.48■□□□□ 0.55
TRAFD1-203ENST00000547063 NUP133Q8WUM0 1156 aa18.48■□□□□ 0.55
TRAFD1-203ENST00000547063 LLPHQ9BRT6 129 aaKnown RBP18.48■□□□□ 0.55
TRAFD1-203ENST00000547063 CPLX1O14810 134 aa18.47■□□□□ 0.55
TRAFD1-203ENST00000547063 CDKL5O76039 1030 aa18.47■□□□□ 0.55
TRAFD1-203ENST00000547063 GNAQP50148 359 aa18.47■□□□□ 0.55
TRAFD1-203ENST00000547063 JAG1P78504 1218 aa18.47■□□□□ 0.55
TRAFD1-203ENST00000547063 RTN1Q16799 776 aa18.47■□□□□ 0.55
TRAFD1-203ENST00000547063 DLK2Q6UY11 383 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms