RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 NT5C2P49902 561 aa19.94■□□□□ 0.78
CCDC38-203ENST00000546803 USP14P54578 494 aa19.94■□□□□ 0.78
CCDC38-203ENST00000546803 HMGCS2P54868 508 aa19.94■□□□□ 0.78
CCDC38-203ENST00000546803 HAND2P61296 217 aa19.94■□□□□ 0.78
CCDC38-203ENST00000546803 ICA1Q05084 483 aa19.94■□□□□ 0.78
CCDC38-203ENST00000546803 AKNAD1Q5T1N1 836 aa19.94■□□□□ 0.78
CCDC38-203ENST00000546803 GPAT2Q6NUI2 795 aa19.94■□□□□ 0.78
CCDC38-203ENST00000546803 USP17L2Q6R6M4 530 aa19.94■□□□□ 0.78
CCDC38-203ENST00000546803 GADL1Q6ZQY3 521 aa19.94■□□□□ 0.78
CCDC38-203ENST00000546803 FEZ1Q99689 392 aa19.94■□□□□ 0.78
CCDC38-203ENST00000546803 SLC45A1Q9Y2W3 748 aa19.94■□□□□ 0.78
CCDC38-203ENST00000546803 DOCK1Q14185 1865 aa19.94■□□□□ 0.78
CCDC38-203ENST00000546803 PTH1RQ03431 593 aa19.93■□□□□ 0.78
CCDC38-203ENST00000546803 MFSD6Q6ZSS7 791 aa19.93■□□□□ 0.78
CCDC38-203ENST00000546803 NEDD1Q8NHV4 660 aa19.93■□□□□ 0.78
CCDC38-203ENST00000546803 STAG1Q8WVM7 1258 aa19.93■□□□□ 0.78
CCDC38-203ENST00000546803 MAP4K1Q92918 833 aa19.93■□□□□ 0.78
CCDC38-203ENST00000546803 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.93■□□□□ 0.78
CCDC38-203ENST00000546803 SH2D4AQ9H788 454 aa19.93■□□□□ 0.78
CCDC38-203ENST00000546803 ARHGEF10LQ9HCE6 1279 aa19.93■□□□□ 0.78
CCDC38-203ENST00000546803 AGTPBP1Q9UPW5 1226 aa19.93■□□□□ 0.78
CCDC38-203ENST00000546803 BAZ2AQ9UIF9 1905 aaKnown RBP19.92■□□□□ 0.78
CCDC38-203ENST00000546803 PDHXO00330 501 aa19.92■□□□□ 0.78
CCDC38-203ENST00000546803 TSPY3P0CV98 308 aa19.92■□□□□ 0.78
CCDC38-203ENST00000546803 TSPY8P0CW00 308 aa19.92■□□□□ 0.78
CCDC38-203ENST00000546803 HSPA8P11142 646 aaKnown RBP19.92■□□□□ 0.78
CCDC38-203ENST00000546803 TFAP4Q01664 338 aa19.92■□□□□ 0.78
CCDC38-203ENST00000546803 PABPC4Q13310 644 aaKnown RBP eCLIP19.92■□□□□ 0.78
CCDC38-203ENST00000546803 TAF1CQ15572 869 aaPredicted RBP19.92■□□□□ 0.78
CCDC38-203ENST00000546803 NOM1Q5C9Z4 860 aaKnown RBP19.92■□□□□ 0.78
CCDC38-203ENST00000546803 PPP4R3BQ5MIZ7 849 aa19.92■□□□□ 0.78
CCDC38-203ENST00000546803 ACER1Q8TDN7 264 aa19.92■□□□□ 0.78
CCDC38-203ENST00000546803 C12orf42Q96LP6 360 aa19.92■□□□□ 0.78
CCDC38-203ENST00000546803 ZFYVE28Q9HCC9 887 aa19.92■□□□□ 0.78
CCDC38-203ENST00000546803 CEP350Q5VT06 3117 aa19.92■□□□□ 0.78
CCDC38-203ENST00000546803 IGKV6D-41A0A0C4DH26 115 aa19.91■□□□□ 0.78
CCDC38-203ENST00000546803 TBC1D8O95759 1140 aa19.91■□□□□ 0.78
CCDC38-203ENST00000546803 SIAH1Q8IUQ4 282 aa19.91■□□□□ 0.78
CCDC38-203ENST00000546803 INCENPQ9NQS7 918 aa19.91■□□□□ 0.78
CCDC38-203ENST00000546803 TOMM22Q9NS69 142 aa19.91■□□□□ 0.78
CCDC38-203ENST00000546803 NYAP2Q9P242 653 aa19.91■□□□□ 0.78
CCDC38-203ENST00000546803 PLIN4Q96Q06 1357 aa19.91■□□□□ 0.78
CCDC38-203ENST00000546803 A0A1W2PRG0 241 aa19.9■□□□□ 0.78
CCDC38-203ENST00000546803 TSPY2A6NKD2 308 aa19.9■□□□□ 0.78
CCDC38-203ENST00000546803 RANBP6O60518 1105 aaKnown RBP19.9■□□□□ 0.78
CCDC38-203ENST00000546803 EEF2P13639 858 aaKnown RBP19.9■□□□□ 0.78
CCDC38-203ENST00000546803 CRHR2Q13324 411 aa19.9■□□□□ 0.78
CCDC38-203ENST00000546803 FAM47AQ5JRC9 791 aa19.9■□□□□ 0.78
CCDC38-203ENST00000546803 TBC1D10CQ8IV04 446 aa19.9■□□□□ 0.78
CCDC38-203ENST00000546803 PARK7Q99497 189 aaKnown RBP19.9■□□□□ 0.78
CCDC38-203ENST00000546803 LSG1Q9H089 658 aaKnown RBP19.9■□□□□ 0.78
CCDC38-203ENST00000546803 NBPF3Q9H094 633 aa19.9■□□□□ 0.78
CCDC38-203ENST00000546803 ANO2Q9NQ90 1003 aa19.9■□□□□ 0.78
CCDC38-203ENST00000546803 EMILIN3Q9NT22 766 aa19.9■□□□□ 0.78
CCDC38-203ENST00000546803 TSKSQ9UJT2 592 aa19.9■□□□□ 0.78
CCDC38-203ENST00000546803 TMX2Q9Y320 296 aa19.9■□□□□ 0.78
CCDC38-203ENST00000546803 TACC3Q9Y6A5 838 aa19.9■□□□□ 0.78
CCDC38-203ENST00000546803 LBX1P52954 281 aa19.89■□□□□ 0.77
CCDC38-203ENST00000546803 RRP12Q5JTH9 1297 aaKnown RBP19.89■□□□□ 0.77
CCDC38-203ENST00000546803 TREML2Q5T2D2 321 aa19.89■□□□□ 0.77
CCDC38-203ENST00000546803 LPAR1Q92633 364 aa19.89■□□□□ 0.77
CCDC38-203ENST00000546803 PRDM10Q9NQV6 1147 aa19.89■□□□□ 0.77
CCDC38-203ENST00000546803 MTMR4Q9NYA4 1195 aa19.89■□□□□ 0.77
CCDC38-203ENST00000546803 PNMA3Q9UL41 463 aa19.89■□□□□ 0.77
CCDC38-203ENST00000546803 SYNPO2Q9UMS6 1093 aa19.89■□□□□ 0.77
CCDC38-203ENST00000546803 RBM8AQ9Y5S9 174 aaKnown RBP19.89■□□□□ 0.77
CCDC38-203ENST00000546803 TTLL1O95922 423 aa19.88■□□□□ 0.77
CCDC38-203ENST00000546803 OSBPP22059 807 aa19.88■□□□□ 0.77
CCDC38-203ENST00000546803 HOXA7P31268 230 aaPredicted RBP19.88■□□□□ 0.77
CCDC38-203ENST00000546803 ATP2B2Q01814 1243 aa19.88■□□□□ 0.77
CCDC38-203ENST00000546803 ZYXQ15942 572 aaKnown RBP19.88■□□□□ 0.77
CCDC38-203ENST00000546803 CLEC10AQ8IUN9 316 aa19.88■□□□□ 0.77
CCDC38-203ENST00000546803 ESR2Q92731 530 aa19.88■□□□□ 0.77
CCDC38-203ENST00000546803 CEP95Q96GE4 821 aa19.88■□□□□ 0.77
CCDC38-203ENST00000546803 VCPKMTQ9H867 229 aa19.88■□□□□ 0.77
CCDC38-203ENST00000546803 CNNM2Q9H8M5 875 aa19.88■□□□□ 0.77
CCDC38-203ENST00000546803 GPR25O00155 361 aa19.87■□□□□ 0.77
CCDC38-203ENST00000546803 TLR2O60603 784 aa19.87■□□□□ 0.77
CCDC38-203ENST00000546803 DGKZQ13574 1117 aa19.87■□□□□ 0.77
CCDC38-203ENST00000546803 MKL1Q969V6 931 aa19.87■□□□□ 0.77
CCDC38-203ENST00000546803 KRT23Q9C075 422 aa19.87■□□□□ 0.77
CCDC38-203ENST00000546803 R3HDMLQ9H3Y0 253 aa19.87■□□□□ 0.77
CCDC38-203ENST00000546803 GOPCQ9HD26 462 aa19.87■□□□□ 0.77
CCDC38-203ENST00000546803 TCP11L1Q9NUJ3 509 aa19.87■□□□□ 0.77
CCDC38-203ENST00000546803 LAMB1P07942 1786 aa19.87■□□□□ 0.77
CCDC38-203ENST00000546803 CYP21A2P08686 494 aa19.86■□□□□ 0.77
CCDC38-203ENST00000546803 CLIP2Q9UDT6 1046 aa19.86■□□□□ 0.77
CCDC38-203ENST00000546803 NEDD4P46934 1319 aa19.85■□□□□ 0.77
CCDC38-203ENST00000546803 USP17L15C9J2P7 530 aa19.85■□□□□ 0.77
CCDC38-203ENST00000546803 USP17L13C9JLJ4 530 aa19.85■□□□□ 0.77
CCDC38-203ENST00000546803 USP17L11C9JVI0 530 aa19.85■□□□□ 0.77
CCDC38-203ENST00000546803 USP17L18D6R9N7 530 aa19.85■□□□□ 0.77
CCDC38-203ENST00000546803 USP17L22D6RA61 530 aa19.85■□□□□ 0.77
CCDC38-203ENST00000546803 USP17L17D6RBQ6 530 aa19.85■□□□□ 0.77
CCDC38-203ENST00000546803 USP17L19D6RCP7 530 aa19.85■□□□□ 0.77
CCDC38-203ENST00000546803 USP17L20D6RJB6 530 aa19.85■□□□□ 0.77
CCDC38-203ENST00000546803 CYP2C8P10632 490 aa19.85■□□□□ 0.77
CCDC38-203ENST00000546803 VCAM1P19320 739 aa19.85■□□□□ 0.77
CCDC38-203ENST00000546803 IRX3P78415 501 aaPredicted RBP19.85■□□□□ 0.77
CCDC38-203ENST00000546803 USP17L24Q0WX57 530 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms