RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 KLHL7Q8IXQ5 586 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 PAF1Q8N7H5 531 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 CABS1Q96KC9 395 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 NYXQ9GZU5 481 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 ATP6V0A2Q9Y487 856 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 A0A1B0GUA9 196 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 CEP104O60308 925 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 LACTBP83111 547 aaPredicted RBP13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 LONRF2Q1L5Z9 754 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 MROH5Q6ZUA9 1318 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 KIF1BO60333 1816 aa13.62□□□□□ -0.23
NPC1L1-204ENST00000546276 RFC4P35249 363 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 CABP7Q86V35 215 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 PPP1R14CQ8TAE6 165 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 ERCC5P28715 1186 aaPredicted RBP13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 DNM2P50570 870 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 CLCN6P51797 869 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 MRPL12P52815 198 aaKnown RBP13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 PROSER3Q2NL68 480 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 FBXO38Q6PIJ6 1188 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 LRWD1Q9UFC0 647 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 IQGAP3Q86VI3 1631 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 H7C1D1 291 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 STAMBPO95630 424 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 GNGT1P63211 74 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 PARP10Q53GL7 1025 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 C2CD5Q86YS7 1000 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 FANCBQ8NB91 859 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 NUCKS1Q9H1E3 243 aaKnown RBP13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 FAM207AQ9NSI2 230 aaPredicted RBP13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 GOLGA8KD6RF30 607 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 ZBTB16Q05516 673 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 PPARAQ07869 468 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 NAA25Q14CX7 972 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 RPS6KA1Q15418 735 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 CCDC50Q8IVM0 306 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 ACSBG1Q96GR2 724 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 IFT74Q96LB3 600 aa13.61□□□□□ -0.23
NPC1L1-204ENST00000546276 GOLGA8FQ08AF8 430 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 GOLGA8DPQ0D2H9 430 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 SFMBT2Q5VUG0 894 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 RRAGAQ7L523 313 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 IFNL3Q8IZI9 196 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 DNAI2Q9GZS0 605 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 GPR108Q9NPR9 543 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 NKIRAS1Q9NYS0 192 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 EPN1Q9Y6I3 576 aaPredicted RBP13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 TMEM2Q9UHN6 1383 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 GTPBP6O43824 516 aaPredicted RBP13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 CYP2E1P05181 493 aaPredicted RBP13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 PDE6AP16499 860 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 ATP5DP30049 168 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 KLHL30Q0D2K2 578 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 MTMR3Q13615 1198 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 HYOU1Q9Y4L1 999 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 EEF2P13639 858 aaKnown RBP13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 TCIRG1Q13488 830 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 LRRC24Q50LG9 513 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 DDX41Q9UJV9 622 aaKnown RBP13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 JAG2Q9Y219 1238 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 MED23Q9ULK4 1368 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 TNFAIP3P21580 790 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 GJC1P36383 396 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 MAP3K9P80192 1104 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 KIF23Q02241 960 aaPredicted RBP13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 CROCCP2Q86T23 111 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 CMTR1Q8N1G2 835 aaKnown RBP13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 SNX29Q8TEQ0 813 aa13.6□□□□□ -0.23
NPC1L1-204ENST00000546276 F8W031 263 aaPredicted RBP13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 ARID4AP29374 1257 aaPredicted RBP13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 CASP14P31944 242 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 GPIHBP1Q8IV16 184 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 MYO1AQ9UBC5 1043 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 CCDC151A5D8V7 595 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 PPFIA4O75335 1185 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 ST5P78524 1137 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 TPTE2Q6XPS3 522 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 DYMQ7RTS9 669 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 VSTM4Q8IW00 320 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 SLC35F6Q8N357 371 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 FRMD4BQ9Y2L6 1034 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 E7EVH7 732 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 TRIM31Q9BZY9 425 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 MAST3O60307 1309 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 TCP1P17987 556 aaKnown RBP13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 COPB1P53618 953 aaKnown RBP13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 MXRA7P84157 204 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 INTS8Q75QN2 995 aaKnown RBP13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 GSDMAQ96QA5 445 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 CAPS2Q9BXY5 557 aa13.59□□□□□ -0.23
NPC1L1-204ENST00000546276 HIBADHP31937 336 aaKnown RBP13.58□□□□□ -0.24
NPC1L1-204ENST00000546276 LZTS2Q9BRK4 669 aa13.58□□□□□ -0.24
NPC1L1-204ENST00000546276 TRIM7Q9C029 511 aa13.58□□□□□ -0.24
NPC1L1-204ENST00000546276 FLOT1O75955 427 aa13.58□□□□□ -0.24
NPC1L1-204ENST00000546276 TERF2Q15554 542 aa13.58□□□□□ -0.24
NPC1L1-204ENST00000546276 HAUS3Q68CZ6 603 aa13.58□□□□□ -0.24
NPC1L1-204ENST00000546276 CALUO43852 315 aaPredicted RBP13.58□□□□□ -0.24
NPC1L1-204ENST00000546276 PLCB3Q01970 1234 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms