RNA–Protein interactions for RNA: ENST00000546181.2

NECAP1-209, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 1,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-209ENST00000546181 DIEXFQ68CQ4 756 aaKnown RBP14.04□□□□□ -0.16
NECAP1-209ENST00000546181 LHX8Q68G74 356 aa14.04□□□□□ -0.16
NECAP1-209ENST00000546181 ACER1Q8TDN7 264 aa14.04□□□□□ -0.16
NECAP1-209ENST00000546181 EDC3Q96F86 508 aaKnown RBP14.04□□□□□ -0.16
NECAP1-209ENST00000546181 RIOK1Q9BRS2 568 aaKnown RBP14.04□□□□□ -0.16
NECAP1-209ENST00000546181 PRO3102Q9H379 93 aa14.04□□□□□ -0.16
NECAP1-209ENST00000546181 C19orf81C9J6K1 198 aa14.03□□□□□ -0.16
NECAP1-209ENST00000546181 EVI5O60447 810 aa14.03□□□□□ -0.16
NECAP1-209ENST00000546181 CNMDO75829 334 aa14.03□□□□□ -0.16
NECAP1-209ENST00000546181 TATDN1Q6P1N9 297 aa14.03□□□□□ -0.16
NECAP1-209ENST00000546181 USP17L2Q6R6M4 530 aa14.03□□□□□ -0.16
NECAP1-209ENST00000546181 GPRC5AQ8NFJ5 357 aa14.03□□□□□ -0.16
NECAP1-209ENST00000546181 RHPN1Q8TCX5 695 aa14.03□□□□□ -0.16
NECAP1-209ENST00000546181 SERPINB13Q9UIV8 391 aa14.03□□□□□ -0.16
NECAP1-209ENST00000546181 NR2E3Q9Y5X4 410 aa14.03□□□□□ -0.16
NECAP1-209ENST00000546181 LAMA3Q16787 3333 aa14.02□□□□□ -0.16
NECAP1-209ENST00000546181 ZBED9Q6R2W3 1325 aa14.02□□□□□ -0.17
NECAP1-209ENST00000546181 RPTORQ8N122 1335 aa14.02□□□□□ -0.17
NECAP1-209ENST00000546181 CHGBP05060 677 aa14.02□□□□□ -0.17
NECAP1-209ENST00000546181 CYP2D6P10635 497 aa14.02□□□□□ -0.17
NECAP1-209ENST00000546181 PDE6AP16499 860 aa14.02□□□□□ -0.17
NECAP1-209ENST00000546181 SHMT1P34896 483 aa14.02□□□□□ -0.17
NECAP1-209ENST00000546181 ERVK-9P63128 1117 aa14.02□□□□□ -0.17
NECAP1-209ENST00000546181 ERVK-24P63145 666 aa14.02□□□□□ -0.17
NECAP1-209ENST00000546181 MAP3K12Q12852 859 aa14.02□□□□□ -0.17
NECAP1-209ENST00000546181 GPR142Q7Z601 462 aa14.02□□□□□ -0.17
NECAP1-209ENST00000546181 SIRT2Q8IXJ6 389 aa14.02□□□□□ -0.17
NECAP1-209ENST00000546181 C7orf61Q8IZ16 206 aa14.02□□□□□ -0.17
NECAP1-209ENST00000546181 DNAJC2Q99543 621 aaKnown RBP14.02□□□□□ -0.17
NECAP1-209ENST00000546181 FEZ1Q99689 392 aa14.02□□□□□ -0.17
NECAP1-209ENST00000546181 HMX1Q9NP08 348 aaPredicted RBP14.02□□□□□ -0.17
NECAP1-209ENST00000546181 STAP2Q9UGK3 403 aa14.02□□□□□ -0.17
NECAP1-209ENST00000546181 COG6Q9Y2V7 657 aa14.02□□□□□ -0.17
NECAP1-209ENST00000546181 BAZ2AQ9UIF9 1905 aaKnown RBP14.02□□□□□ -0.17
NECAP1-209ENST00000546181 MAGEB6P1A0A0J9YX57 407 aa14.01□□□□□ -0.17
NECAP1-209ENST00000546181 SMIM22K7EJ46 135 aa14.01□□□□□ -0.17
NECAP1-209ENST00000546181 GOLIM4O00461 696 aa14.01□□□□□ -0.17
NECAP1-209ENST00000546181 SOX1O00570 391 aaPredicted RBP14.01□□□□□ -0.17
NECAP1-209ENST00000546181 CCND3P30281 292 aaPredicted RBP14.01□□□□□ -0.17
NECAP1-209ENST00000546181 GUCY1A2P33402 732 aa14.01□□□□□ -0.17
NECAP1-209ENST00000546181 ABCB5Q2M3G0 1257 aa14.01□□□□□ -0.17
NECAP1-209ENST00000546181 CERKLQ49MI3 558 aaPredicted RBP14.01□□□□□ -0.17
NECAP1-209ENST00000546181 SLC9C2Q5TAH2 1124 aa14.01□□□□□ -0.17
NECAP1-209ENST00000546181 MAP3K21Q5TCX8 1036 aa14.01□□□□□ -0.17
NECAP1-209ENST00000546181 ERC1Q8IUD2 1116 aa14.01□□□□□ -0.17
NECAP1-209ENST00000546181 RASEFQ8IZ41 740 aa14.01□□□□□ -0.17
NECAP1-209ENST00000546181 SLC44A5Q8NCS7 719 aa14.01□□□□□ -0.17
NECAP1-209ENST00000546181 SDR42E1Q8WUS8 393 aa14.01□□□□□ -0.17
NECAP1-209ENST00000546181 NUDT12Q9BQG2 462 aa14.01□□□□□ -0.17
NECAP1-209ENST00000546181 EHD4Q9H223 541 aa14.01□□□□□ -0.17
NECAP1-209ENST00000546181 GINM1Q9NU53 330 aa14.01□□□□□ -0.17
NECAP1-209ENST00000546181 ZMYND8Q9ULU4 1186 aaPredicted RBP14.01□□□□□ -0.17
NECAP1-209ENST00000546181 FRMPD3Q5JV73 1810 aa14.01□□□□□ -0.17
NECAP1-209ENST00000546181 MYH8P13535 1937 aa14□□□□□ -0.17
NECAP1-209ENST00000546181 ZNF532Q9HCE3 1301 aa14□□□□□ -0.17
NECAP1-209ENST00000546181 SYN1P17600 705 aa14□□□□□ -0.17
NECAP1-209ENST00000546181 VCAM1P19320 739 aa14□□□□□ -0.17
NECAP1-209ENST00000546181 CACNB2Q08289 660 aaPredicted RBP14□□□□□ -0.17
NECAP1-209ENST00000546181 SEPT2Q15019 361 aa14□□□□□ -0.17
NECAP1-209ENST00000546181 NECAB2Q7Z6G3 386 aa14□□□□□ -0.17
NECAP1-209ENST00000546181 CLEC10AQ8IUN9 316 aa14□□□□□ -0.17
NECAP1-209ENST00000546181 LCORLQ8N3X6 602 aa14□□□□□ -0.17
NECAP1-209ENST00000546181 USP6NLQ92738 828 aa14□□□□□ -0.17
NECAP1-209ENST00000546181 MS4A3Q96HJ5 214 aa14□□□□□ -0.17
NECAP1-209ENST00000546181 A0A1W2PRG0 241 aa13.99□□□□□ -0.17
NECAP1-209ENST00000546181 TCRBV5S4A2TA0A5A2 114 aa13.99□□□□□ -0.17
NECAP1-209ENST00000546181 POLR3DP05423 398 aaPredicted RBP13.99□□□□□ -0.17
NECAP1-209ENST00000546181 ZKSCAN1P17029 563 aaPredicted RBP13.99□□□□□ -0.17
NECAP1-209ENST00000546181 MAPK4P31152 587 aa13.99□□□□□ -0.17
NECAP1-209ENST00000546181 PDE3AQ14432 1141 aa13.99□□□□□ -0.17
NECAP1-209ENST00000546181 MORN1Q5T089 497 aa13.99□□□□□ -0.17
NECAP1-209ENST00000546181 WDR78Q5VTH9 848 aa13.99□□□□□ -0.17
NECAP1-209ENST00000546181 PLEKHH3Q7Z736 793 aa13.99□□□□□ -0.17
NECAP1-209ENST00000546181 TTC6Q86TZ1 520 aa13.99□□□□□ -0.17
NECAP1-209ENST00000546181 CCAR1Q8IX12 1150 aaKnown RBP13.99□□□□□ -0.17
NECAP1-209ENST00000546181 SOCS4Q8WXH5 440 aa13.99□□□□□ -0.17
NECAP1-209ENST00000546181 C12orf42Q96LP6 360 aa13.99□□□□□ -0.17
NECAP1-209ENST00000546181 RPAP3Q9H6T3 665 aaPredicted RBP13.99□□□□□ -0.17
NECAP1-209ENST00000546181 ARMT1Q9H993 441 aa13.99□□□□□ -0.17
NECAP1-209ENST00000546181 MCM9Q9NXL9 1143 aa13.99□□□□□ -0.17
NECAP1-209ENST00000546181 FLRT1Q9NZU1 646 aa13.99□□□□□ -0.17
NECAP1-209ENST00000546181 BTBD7Q9P203 1132 aa13.99□□□□□ -0.17
NECAP1-209ENST00000546181 RLFQ13129 1914 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 PFASO15067 1338 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 USP17L15C9J2P7 530 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 USP17L13C9JLJ4 530 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 USP17L11C9JVI0 530 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 USP17L18D6R9N7 530 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 USP17L22D6RA61 530 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 USP17L17D6RBQ6 530 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 USP17L19D6RCP7 530 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 USP17L20D6RJB6 530 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 MPHOSPH10O00566 681 aaKnown RBP13.98□□□□□ -0.17
NECAP1-209ENST00000546181 PRKAB2O43741 272 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 IGSF3O75054 1194 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 GABPAQ06546 454 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 USP17L24Q0WX57 530 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 KIAA1755Q5JYT7 1200 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 CATSPERGQ6ZRH7 1159 aa13.98□□□□□ -0.17
NECAP1-209ENST00000546181 DYNLL2Q96FJ2 89 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms