RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-208ENST00000545831 KRT26Q7Z3Y9 468 aa11.74□□□□□ -0.53
NPIPA1-208ENST00000545831 ZNF654Q8IZM8 581 aa11.74□□□□□ -0.53
NPIPA1-208ENST00000545831 NECAB1Q8N987 351 aa11.74□□□□□ -0.53
NPIPA1-208ENST00000545831 NUP133Q8WUM0 1156 aa11.74□□□□□ -0.53
NPIPA1-208ENST00000545831 GTF3C6Q969F1 213 aa11.74□□□□□ -0.53
NPIPA1-208ENST00000545831 ZNF341Q9BYN7 854 aa11.74□□□□□ -0.53
NPIPA1-208ENST00000545831 KANSL2Q9H9L4 492 aa11.74□□□□□ -0.53
NPIPA1-208ENST00000545831 RRAGCQ9HB90 399 aa11.74□□□□□ -0.53
NPIPA1-208ENST00000545831 SENP2Q9HC62 589 aa11.74□□□□□ -0.53
NPIPA1-208ENST00000545831 IL17RBQ9NRM6 502 aa11.74□□□□□ -0.53
NPIPA1-208ENST00000545831 FOXD4L1Q9NU39 408 aa11.74□□□□□ -0.53
NPIPA1-208ENST00000545831 MTMR4Q9NYA4 1195 aa11.74□□□□□ -0.53
NPIPA1-208ENST00000545831 CLEC11AQ9Y240 323 aa11.74□□□□□ -0.53
NPIPA1-208ENST00000545831 WDR90Q96KV7 1748 aa11.74□□□□□ -0.53
NPIPA1-208ENST00000545831 SCN4AP35499 1836 aa11.74□□□□□ -0.53
NPIPA1-208ENST00000545831 IGKV6D-41A0A0C4DH26 115 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 CCDC196A0A1B0GTZ2 297 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 CPLX1O14810 134 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 GDF11O95390 407 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 TTLL1O95922 423 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 SLURP2P0DP57 97 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 NF2P35240 595 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 CAP2P40123 477 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 SCRN1Q12765 414 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 RCSD1Q6JBY9 416 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 CDC37L1Q7L3B6 337 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 MICU3Q86XE3 530 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 CDAN1Q8IWY9 1227 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 CEP95Q96GE4 821 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 LLPHQ9BRT6 129 aaKnown RBP11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 GINM1Q9NU53 330 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 CLIP2Q9UDT6 1046 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 SMC3Q9UQE7 1217 aa11.73□□□□□ -0.53
NPIPA1-208ENST00000545831 CDKL5O76039 1030 aa11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 GH2P01242 217 aa11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 ASNSP08243 561 aa11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 NOVP48745 357 aa11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 ATP2B2Q01814 1243 aa11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 RAB3GAP1Q15042 981 aa11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 RTN1Q16799 776 aa11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 PRAMEF18Q5VWM3 479 aa11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 USP48Q86UV5 1035 aa11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 RAB11FIP4Q86YS3 637 aa11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 PNMA1Q8ND90 353 aa11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 CTCFLQ8NI51 663 aaPredicted RBP11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 TMEM47Q9BQJ4 181 aa11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 MYL10Q9BUA6 226 aa11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 RBM28Q9NW13 759 aaKnown RBP11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 NYAP2Q9P242 653 aa11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 HPS5Q9UPZ3 1129 aa11.72□□□□□ -0.53
NPIPA1-208ENST00000545831 ADM5C9JUS6 153 aa11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 PPP1R12BO60237 982 aaPredicted RBP11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 CTNND1O60716 968 aaKnown RBP11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 KIF5BP33176 963 aa11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 GNAQP50148 359 aa11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 HMGN5P82970 282 aaKnown RBP11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 ICA1Q05084 483 aa11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 MAPK8IP2Q13387 824 aaPredicted RBP11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 SEPT2Q15019 361 aa11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 FANCBQ8NB91 859 aa11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 CNKSR2Q8WXI2 1034 aa11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 MAP3K14Q99558 947 aa11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 NCOA5Q9HCD5 579 aaKnown RBP11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 ARHGEF10LQ9HCE6 1279 aa11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 ZBTB21Q9ULJ3 1066 aa11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 KIF3AQ9Y496 699 aa11.71□□□□□ -0.53
NPIPA1-208ENST00000545831 SIPA1L1O43166 1804 aa11.71□□□□□ -0.54
NPIPA1-208ENST00000545831 MYH8P13535 1937 aa11.7□□□□□ -0.54
NPIPA1-208ENST00000545831 PHF20L1A8MW92 1017 aa11.7□□□□□ -0.54
NPIPA1-208ENST00000545831 EEF2P13639 858 aaKnown RBP11.7□□□□□ -0.54
NPIPA1-208ENST00000545831 RXRAP19793 462 aa11.7□□□□□ -0.54
NPIPA1-208ENST00000545831 ST3GAL1Q11201 340 aa11.7□□□□□ -0.54
NPIPA1-208ENST00000545831 TROAPQ12815 778 aa11.7□□□□□ -0.54
NPIPA1-208ENST00000545831 RRP1BQ14684 758 aaKnown RBP11.7□□□□□ -0.54
NPIPA1-208ENST00000545831 LDHDQ86WU2 507 aa11.7□□□□□ -0.54
NPIPA1-208ENST00000545831 CCDC144CPQ8IYA2 1237 aa11.7□□□□□ -0.54
NPIPA1-208ENST00000545831 FAM184AQ8NB25 1140 aa11.7□□□□□ -0.54
NPIPA1-208ENST00000545831 ZNF526Q8TF50 670 aaPredicted RBP11.7□□□□□ -0.54
NPIPA1-208ENST00000545831 MKL1Q969V6 931 aa11.7□□□□□ -0.54
NPIPA1-208ENST00000545831 CDCA5Q96FF9 252 aa11.7□□□□□ -0.54
NPIPA1-208ENST00000545831 ZNF112Q9UJU3 913 aa11.7□□□□□ -0.54
NPIPA1-208ENST00000545831 SYNPO2Q9UMS6 1093 aa11.7□□□□□ -0.54
NPIPA1-208ENST00000545831 NID2Q14112 1375 aa11.69□□□□□ -0.54
NPIPA1-208ENST00000545831 PDIA4P13667 645 aaKnown RBP11.69□□□□□ -0.54
NPIPA1-208ENST00000545831 GJB2P29033 226 aa11.69□□□□□ -0.54
NPIPA1-208ENST00000545831 CDC27P30260 824 aa11.69□□□□□ -0.54
NPIPA1-208ENST00000545831 GUCY1A2P33402 732 aa11.69□□□□□ -0.54
NPIPA1-208ENST00000545831 ADD1P35611 737 aaKnown RBP11.69□□□□□ -0.54
NPIPA1-208ENST00000545831 IREB2P48200 963 aaKnown RBP11.69□□□□□ -0.54
NPIPA1-208ENST00000545831 WRNIP1Q96S55 665 aa11.69□□□□□ -0.54
NPIPA1-208ENST00000545831 GLIS2Q9BZE0 524 aaPredicted RBP11.69□□□□□ -0.54
NPIPA1-208ENST00000545831 SH2D4AQ9H788 454 aa11.69□□□□□ -0.54
NPIPA1-208ENST00000545831 NMRK2Q9NPI5 230 aa11.69□□□□□ -0.54
NPIPA1-208ENST00000545831 PICK1Q9NRD5 415 aa11.69□□□□□ -0.54
NPIPA1-208ENST00000545831 CHMP5Q9NZZ3 219 aa11.69□□□□□ -0.54
NPIPA1-208ENST00000545831 CIZ1Q9ULV3 898 aaPredicted RBP11.69□□□□□ -0.54
NPIPA1-208ENST00000545831 MTMR7Q9Y216 660 aa11.69□□□□□ -0.54
NPIPA1-208ENST00000545831 PTPDC1A2A3K4 754 aa11.68□□□□□ -0.54
NPIPA1-208ENST00000545831 USP17L5A8MUK1 530 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms