RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-221ENST00000545367 HERVK_113P62684 666 aa10.67□□□□□ -0.7
NPIPB4-221ENST00000545367 ATP2B3Q16720 1220 aa10.67□□□□□ -0.7
NPIPB4-221ENST00000545367 CCDC27Q2M243 656 aa10.67□□□□□ -0.7
NPIPB4-221ENST00000545367 TRMT44Q8IYL2 757 aaKnown RBP10.67□□□□□ -0.7
NPIPB4-221ENST00000545367 ZNF710Q8N1W2 664 aa10.67□□□□□ -0.7
NPIPB4-221ENST00000545367 FAM122AQ96E09 287 aa10.67□□□□□ -0.7
NPIPB4-221ENST00000545367 PAGR1Q9BTK6 254 aa10.67□□□□□ -0.7
NPIPB4-221ENST00000545367 PORCNQ9H237 461 aa10.67□□□□□ -0.7
NPIPB4-221ENST00000545367 PRKRIP1Q9H875 184 aaPredicted RBP10.67□□□□□ -0.7
NPIPB4-221ENST00000545367 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.67□□□□□ -0.7
NPIPB4-221ENST00000545367 CWC22Q9HCG8 908 aaKnown RBP10.67□□□□□ -0.7
NPIPB4-221ENST00000545367 MYH8P13535 1937 aa10.66□□□□□ -0.7
NPIPB4-221ENST00000545367 ST18O60284 1047 aa10.66□□□□□ -0.7
NPIPB4-221ENST00000545367 SMAD3P84022 425 aaKnown RBP10.66□□□□□ -0.7
NPIPB4-221ENST00000545367 MAP3K10Q02779 954 aa10.66□□□□□ -0.7
NPIPB4-221ENST00000545367 RRP1BQ14684 758 aaKnown RBP10.66□□□□□ -0.7
NPIPB4-221ENST00000545367 LCE2DQ5TA82 110 aaPredicted RBP10.66□□□□□ -0.7
NPIPB4-221ENST00000545367 GPR142Q7Z601 462 aa10.66□□□□□ -0.7
NPIPB4-221ENST00000545367 CCAR1Q8IX12 1150 aaKnown RBP10.66□□□□□ -0.7
NPIPB4-221ENST00000545367 OSBPL5Q9H0X9 879 aaPredicted RBP10.66□□□□□ -0.7
NPIPB4-221ENST00000545367 SIL1Q9H173 461 aa10.66□□□□□ -0.7
NPIPB4-221ENST00000545367 NAV1Q8NEY1 1877 aa10.66□□□□□ -0.7
NPIPB4-221ENST00000545367 PARP14Q460N5 1801 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 EYA2O00167 538 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 DNM1LO00429 736 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 CNGA1P29973 690 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 MAPK4P31152 587 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 ERVK-9P63128 1117 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 ERVK-24P63145 666 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 TRIM60Q495X7 471 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 GPRC5AQ8NFJ5 357 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 USP6NLQ92738 828 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 BADQ92934 168 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 FAM163AQ96GL9 167 aaPredicted RBP10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 RNPC3Q96LT9 517 aaKnown RBP10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 TBC1D2Q9BYX2 928 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 AS3MTQ9HBK9 375 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 GNL3LQ9NVN8 582 aaKnown RBP10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 TMOD4Q9NZQ9 345 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 ABCF2Q9UG63 623 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 DDX20Q9UHI6 824 aaKnown RBP10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 DENND2AQ9ULE3 1009 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 NDUFB9Q9Y6M9 179 aa10.65□□□□□ -0.7
NPIPB4-221ENST00000545367 COL11A1P12107 1806 aaPredicted RBP10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 USP17L5A8MUK1 530 aa10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 HOXB1P14653 301 aaPredicted RBP10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 ADORA1P30542 326 aa10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 RASGRF1Q13972 1273 aa10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 SHROOM1Q2M3G4 852 aaPredicted RBP10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 SH3D19Q5HYK7 790 aa10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 MORN1Q5T089 497 aa10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 WDR78Q5VTH9 848 aa10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 PLEKHH3Q7Z736 793 aa10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 ZGPATQ8N5A5 531 aaKnown RBP10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 PTCD2Q8WV60 388 aaKnown RBP10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 P2RX7Q99572 595 aaKnown RBP10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 SLC24A3Q9HC58 644 aa10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 PDLIM7Q9NR12 457 aa10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 FLRT1Q9NZU1 646 aa10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 SALL2Q9Y467 1007 aaPredicted RBP10.64□□□□□ -0.71
NPIPB4-221ENST00000545367 SEMA3EO15041 775 aa10.63□□□□□ -0.71
NPIPB4-221ENST00000545367 TBC1D12O60347 775 aa10.63□□□□□ -0.71
NPIPB4-221ENST00000545367 ZMYND10O75800 440 aa10.63□□□□□ -0.71
NPIPB4-221ENST00000545367 CAP2P40123 477 aa10.63□□□□□ -0.71
NPIPB4-221ENST00000545367 RHBDL3P58872 404 aa10.63□□□□□ -0.71
NPIPB4-221ENST00000545367 MAP2K5Q13163 448 aa10.63□□□□□ -0.71
NPIPB4-221ENST00000545367 GJC2Q5T442 439 aaPredicted RBP10.63□□□□□ -0.71
NPIPB4-221ENST00000545367 MFSD14CQ5VZR4 134 aa10.63□□□□□ -0.71
NPIPB4-221ENST00000545367 ADAMTS19Q8TE59 1207 aa10.63□□□□□ -0.71
NPIPB4-221ENST00000545367 LPAR1Q92633 364 aa10.63□□□□□ -0.71
NPIPB4-221ENST00000545367 LRRC37A2A6NM11 1700 aa10.63□□□□□ -0.71
NPIPB4-221ENST00000545367 ZNFX1Q9P2E3 1918 aaKnown RBP10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 KBTBD13C9JR72 458 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 MSCO60682 206 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 DNAJB2P25686 324 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 CYP2C19P33261 490 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 RFX5P48382 616 aaPredicted RBP10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 BACE1P56817 501 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 MAP3K12Q12852 859 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 CAMK2BQ13554 666 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 GRIN2CQ14957 1233 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 ANO1Q5XXA6 986 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 ATG9AQ7Z3C6 839 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 SH3RF1Q7Z6J0 888 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 SLF2Q8IX21 1173 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 PPM1EQ8WY54 764 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 THEGQ9P2T0 379 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 RBPJLQ9UBG7 517 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 PIEZO1Q92508 2521 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 SMCHD1A6NHR9 2005 aa10.62□□□□□ -0.71
NPIPB4-221ENST00000545367 GDF11O95390 407 aa10.61□□□□□ -0.71
NPIPB4-221ENST00000545367 HOXA7P31268 230 aaPredicted RBP10.61□□□□□ -0.71
NPIPB4-221ENST00000545367 MECOMQ03112 1051 aa10.61□□□□□ -0.71
NPIPB4-221ENST00000545367 Q3C1V9 767 aa10.61□□□□□ -0.71
NPIPB4-221ENST00000545367 CCDC102BQ68D86 513 aa10.61□□□□□ -0.71
NPIPB4-221ENST00000545367 POTEEQ6S8J3 1075 aa10.61□□□□□ -0.71
NPIPB4-221ENST00000545367 TRPV1Q8NER1 839 aa10.61□□□□□ -0.71
NPIPB4-221ENST00000545367 ZNF384Q8TF68 577 aa10.61□□□□□ -0.71
NPIPB4-221ENST00000545367 UHRF1Q96T88 793 aaPredicted RBP10.61□□□□□ -0.71
NPIPB4-221ENST00000545367 PDS5AQ29RF7 1337 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms