RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 USP17L19D6RCP7 530 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 USP17L20D6RJB6 530 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 CNMDO75829 334 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 PRKAR2AP13861 404 aaKnown RBP16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 PLCD1P51178 756 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 USP14P54578 494 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 GABPAQ06546 454 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 USP17L24Q0WX57 530 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 ABCB5Q2M3G0 1257 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 CERKLQ49MI3 558 aaPredicted RBP16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 LBX2Q6XYB7 198 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 GPR142Q7Z601 462 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 ACER1Q8TDN7 264 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 IL1RAPL2Q9NP60 686 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 RABGAP1Q9Y3P9 1069 aa16.87■□□□□ 0.29
SEMA4D-224ENST00000544513 TCRBV5S4A2TA0A5A2 114 aa16.86■□□□□ 0.29
SEMA4D-224ENST00000544513 PDE6AP16499 860 aa16.86■□□□□ 0.29
SEMA4D-224ENST00000544513 GUCY1A2P33402 732 aa16.86■□□□□ 0.29
SEMA4D-224ENST00000544513 PDE3AQ14432 1141 aa16.86■□□□□ 0.29
SEMA4D-224ENST00000544513 TTF1Q15361 905 aaPredicted RBP16.86■□□□□ 0.29
SEMA4D-224ENST00000544513 CATSPERGQ6ZRH7 1159 aa16.86■□□□□ 0.29
SEMA4D-224ENST00000544513 PLEKHH3Q7Z736 793 aa16.86■□□□□ 0.29
SEMA4D-224ENST00000544513 SIRT2Q8IXJ6 389 aa16.86■□□□□ 0.29
SEMA4D-224ENST00000544513 NBPF3Q9H094 633 aa16.86■□□□□ 0.29
SEMA4D-224ENST00000544513 MAGEB6P1A0A0J9YX57 407 aa16.85■□□□□ 0.29
SEMA4D-224ENST00000544513 VCAM1P19320 739 aa16.85■□□□□ 0.29
SEMA4D-224ENST00000544513 RGS2P41220 211 aa16.85■□□□□ 0.29
SEMA4D-224ENST00000544513 CACNB2Q08289 660 aaPredicted RBP16.85■□□□□ 0.29
SEMA4D-224ENST00000544513 RAB3GAP1Q15042 981 aa16.85■□□□□ 0.29
SEMA4D-224ENST00000544513 SLC9C2Q5TAH2 1124 aa16.85■□□□□ 0.29
SEMA4D-224ENST00000544513 RPAP2Q8IXW5 612 aaPredicted RBP16.85■□□□□ 0.29
SEMA4D-224ENST00000544513 PAGR1Q9BTK6 254 aa16.85■□□□□ 0.29
SEMA4D-224ENST00000544513 ZBTB40Q9NUA8 1239 aa16.85■□□□□ 0.29
SEMA4D-224ENST00000544513 MS4A1P11836 297 aa16.84■□□□□ 0.29
SEMA4D-224ENST00000544513 ZKSCAN1P17029 563 aaPredicted RBP16.84■□□□□ 0.29
SEMA4D-224ENST00000544513 ZYXQ15942 572 aaKnown RBP16.84■□□□□ 0.29
SEMA4D-224ENST00000544513 CCL14Q16627 93 aa16.84■□□□□ 0.29
SEMA4D-224ENST00000544513 LHX8Q68G74 356 aa16.84■□□□□ 0.29
SEMA4D-224ENST00000544513 KIF1BPQ96EK5 621 aa16.84■□□□□ 0.29
SEMA4D-224ENST00000544513 FEZ1Q99689 392 aa16.84■□□□□ 0.29
SEMA4D-224ENST00000544513 APBA2Q99767 749 aa16.84■□□□□ 0.29
SEMA4D-224ENST00000544513 GDF15Q99988 308 aa16.84■□□□□ 0.29
SEMA4D-224ENST00000544513 CRNKL1Q9BZJ0 848 aaKnown RBP16.84■□□□□ 0.29
SEMA4D-224ENST00000544513 STAP2Q9UGK3 403 aa16.84■□□□□ 0.29
SEMA4D-224ENST00000544513 LAMA2P24043 3122 aaKnown RBP16.84■□□□□ 0.29
SEMA4D-224ENST00000544513 COL6A1P12109 1028 aa16.83■□□□□ 0.28
SEMA4D-224ENST00000544513 BMP8BP34820 402 aa16.83■□□□□ 0.28
SEMA4D-224ENST00000544513 CCNA1P78396 465 aa16.83■□□□□ 0.28
SEMA4D-224ENST00000544513 EVX2Q03828 476 aa16.83■□□□□ 0.28
SEMA4D-224ENST00000544513 MAP2K5Q13163 448 aa16.83■□□□□ 0.28
SEMA4D-224ENST00000544513 DIEXFQ68CQ4 756 aaKnown RBP16.83■□□□□ 0.28
SEMA4D-224ENST00000544513 CCAR1Q8IX12 1150 aaKnown RBP16.83■□□□□ 0.28
SEMA4D-224ENST00000544513 CLASRPQ8N2M8 674 aaKnown RBP16.83■□□□□ 0.28
SEMA4D-224ENST00000544513 C11orf49Q9H6J7 331 aa16.83■□□□□ 0.28
SEMA4D-224ENST00000544513 ZNF532Q9HCE3 1301 aa16.83■□□□□ 0.28
SEMA4D-224ENST00000544513 CABP5Q9NP86 173 aa16.83■□□□□ 0.28
SEMA4D-224ENST00000544513 PFASO15067 1338 aa16.82■□□□□ 0.28
SEMA4D-224ENST00000544513 SLC15A5A6NIM6 579 aa16.82■□□□□ 0.28
SEMA4D-224ENST00000544513 GOLIM4O00461 696 aa16.82■□□□□ 0.28
SEMA4D-224ENST00000544513 IGHA2P01877 340 aa16.82■□□□□ 0.28
SEMA4D-224ENST00000544513 POLR3DP05423 398 aaPredicted RBP16.82■□□□□ 0.28
SEMA4D-224ENST00000544513 HOXC6P09630 235 aa16.82■□□□□ 0.28
SEMA4D-224ENST00000544513 SEPT2Q15019 361 aa16.82■□□□□ 0.28
SEMA4D-224ENST00000544513 C7orf61Q8IZ16 206 aa16.82■□□□□ 0.28
SEMA4D-224ENST00000544513 DCP1AQ9NPI6 582 aaPredicted RBP16.82■□□□□ 0.28
SEMA4D-224ENST00000544513 MCM9Q9NXL9 1143 aa16.82■□□□□ 0.28
SEMA4D-224ENST00000544513 BTBD7Q9P203 1132 aa16.82■□□□□ 0.28
SEMA4D-224ENST00000544513 A0A1W2PRG0 241 aa16.81■□□□□ 0.28
SEMA4D-224ENST00000544513 SPDYE16A6NNV3 312 aaPredicted RBP16.81■□□□□ 0.28
SEMA4D-224ENST00000544513 HMMRO75330 724 aa16.81■□□□□ 0.28
SEMA4D-224ENST00000544513 GLRX3O76003 335 aaKnown RBP16.81■□□□□ 0.28
SEMA4D-224ENST00000544513 IFIT2P09913 472 aaKnown RBP16.81■□□□□ 0.28
SEMA4D-224ENST00000544513 PTPREP23469 700 aa16.81■□□□□ 0.28
SEMA4D-224ENST00000544513 CCND3P30281 292 aaPredicted RBP16.81■□□□□ 0.28
SEMA4D-224ENST00000544513 LCORLQ8N3X6 602 aa16.81■□□□□ 0.28
SEMA4D-224ENST00000544513 EDC3Q96F86 508 aaKnown RBP16.81■□□□□ 0.28
SEMA4D-224ENST00000544513 RPAP3Q9H6T3 665 aaPredicted RBP16.81■□□□□ 0.28
SEMA4D-224ENST00000544513 DDX19BQ9UMR2 479 aa16.81■□□□□ 0.28
SEMA4D-224ENST00000544513 NAV1Q8NEY1 1877 aa16.81■□□□□ 0.28
SEMA4D-224ENST00000544513 SOX1O00570 391 aaPredicted RBP16.8■□□□□ 0.28
SEMA4D-224ENST00000544513 RAB11FIP3O75154 756 aa16.8■□□□□ 0.28
SEMA4D-224ENST00000544513 GRB14Q14449 540 aa16.8■□□□□ 0.28
SEMA4D-224ENST00000544513 SDR42E1Q8WUS8 393 aa16.8■□□□□ 0.28
SEMA4D-224ENST00000544513 DNAJC2Q99543 621 aaKnown RBP16.8■□□□□ 0.28
SEMA4D-224ENST00000544513 FLRT1Q9NZU1 646 aa16.8■□□□□ 0.28
SEMA4D-224ENST00000544513 RLFQ13129 1914 aa16.79■□□□□ 0.28
SEMA4D-224ENST00000544513 CYP2D6P10635 497 aa16.79■□□□□ 0.28
SEMA4D-224ENST00000544513 ATP5JP18859 108 aa16.79■□□□□ 0.28
SEMA4D-224ENST00000544513 SIAH1Q8IUQ4 282 aa16.79■□□□□ 0.28
SEMA4D-224ENST00000544513 PAG1Q9NWQ8 432 aa16.79■□□□□ 0.28
SEMA4D-224ENST00000544513 HOXC10Q9NYD6 342 aa16.79■□□□□ 0.28
SEMA4D-224ENST00000544513 ZMYND8Q9ULU4 1186 aaPredicted RBP16.79■□□□□ 0.28
SEMA4D-224ENST00000544513 COG6Q9Y2V7 657 aa16.79■□□□□ 0.28
SEMA4D-224ENST00000544513 APBB1O00213 710 aa16.78■□□□□ 0.28
SEMA4D-224ENST00000544513 ADD2P35612 726 aa16.78■□□□□ 0.28
SEMA4D-224ENST00000544513 COG2Q14746 738 aa16.78■□□□□ 0.28
SEMA4D-224ENST00000544513 KIAA1755Q5JYT7 1200 aa16.78■□□□□ 0.28
SEMA4D-224ENST00000544513 TMEM179Q6ZVK1 233 aa16.78■□□□□ 0.28
SEMA4D-224ENST00000544513 SLC44A5Q8NCS7 719 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms