RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 TMEM47Q9BQJ4 181 aa15.85■□□□□ 0.13
HCFC2-202ENST00000544223 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.85■□□□□ 0.13
HCFC2-202ENST00000544223 ELP1O95163 1332 aa15.85■□□□□ 0.13
HCFC2-202ENST00000544223 SHTN1A0MZ66 631 aa15.85■□□□□ 0.13
HCFC2-202ENST00000544223 DDTLA6NHG4 134 aaPredicted RBP15.85■□□□□ 0.13
HCFC2-202ENST00000544223 AKR1B1P15121 316 aa15.85■□□□□ 0.13
HCFC2-202ENST00000544223 NASPP49321 788 aaPredicted RBP15.85■□□□□ 0.13
HCFC2-202ENST00000544223 SF3A1Q15459 793 aaKnown RBP15.85■□□□□ 0.13
HCFC2-202ENST00000544223 SPECC1Q5M775 1068 aa15.85■□□□□ 0.13
HCFC2-202ENST00000544223 CCAR1Q8IX12 1150 aaKnown RBP15.85■□□□□ 0.13
HCFC2-202ENST00000544223 RCOR1Q9UKL0 485 aa15.85■□□□□ 0.13
HCFC2-202ENST00000544223 WNT7AO00755 349 aa15.84■□□□□ 0.13
HCFC2-202ENST00000544223 STK38Q15208 465 aa15.84■□□□□ 0.13
HCFC2-202ENST00000544223 CSPP1Q1MSJ5 1256 aa15.84■□□□□ 0.13
HCFC2-202ENST00000544223 STRIP1Q5VSL9 837 aa15.84■□□□□ 0.13
HCFC2-202ENST00000544223 USP17L2Q6R6M4 530 aa15.84■□□□□ 0.13
HCFC2-202ENST00000544223 TMTC3Q6ZXV5 915 aa15.84■□□□□ 0.13
HCFC2-202ENST00000544223 LARGE2Q8N3Y3 721 aa15.84■□□□□ 0.13
HCFC2-202ENST00000544223 CTCFLQ8NI51 663 aaPredicted RBP15.84■□□□□ 0.13
HCFC2-202ENST00000544223 RTN4Q9NQC3 1192 aaKnown RBP15.84■□□□□ 0.13
HCFC2-202ENST00000544223 DLEC1Q9Y238 1755 aa15.84■□□□□ 0.13
HCFC2-202ENST00000544223 MMP1P03956 469 aa15.84■□□□□ 0.13
HCFC2-202ENST00000544223 PLCG2P16885 1265 aa15.84■□□□□ 0.13
HCFC2-202ENST00000544223 ZSCAN29Q8IWY8 852 aaPredicted RBP15.84■□□□□ 0.13
HCFC2-202ENST00000544223 LRRC47Q8N1G4 583 aaKnown RBP15.84■□□□□ 0.13
HCFC2-202ENST00000544223 LINC00301Q8NCQ3 95 aa15.84■□□□□ 0.13
HCFC2-202ENST00000544223 PRMT6Q96LA8 375 aaPredicted RBP15.84■□□□□ 0.13
HCFC2-202ENST00000544223 CLIC6Q96NY7 704 aa15.84■□□□□ 0.13
HCFC2-202ENST00000544223 ROBO3Q96MS0 1386 aa15.83■□□□□ 0.12
HCFC2-202ENST00000544223 CNTNAP5Q8WYK1 1306 aa15.83■□□□□ 0.12
HCFC2-202ENST00000544223 CLRN2A0PK11 232 aa15.83■□□□□ 0.12
HCFC2-202ENST00000544223 ZBTB22O15209 634 aa15.83■□□□□ 0.12
HCFC2-202ENST00000544223 DEXIO95424 95 aa15.83■□□□□ 0.12
HCFC2-202ENST00000544223 PDIA4P13667 645 aaKnown RBP15.83■□□□□ 0.12
HCFC2-202ENST00000544223 ATP2B2Q01814 1243 aa15.83■□□□□ 0.12
HCFC2-202ENST00000544223 ZNF396Q96N95 335 aaPredicted RBP15.83■□□□□ 0.12
HCFC2-202ENST00000544223 VAT1LQ9HCJ6 419 aa15.83■□□□□ 0.12
HCFC2-202ENST00000544223 CCDC196A0A1B0GTZ2 297 aa15.83■□□□□ 0.12
HCFC2-202ENST00000544223 PSMD14O00487 310 aa15.83■□□□□ 0.12
HCFC2-202ENST00000544223 MPHOSPH10O00566 681 aaKnown RBP15.83■□□□□ 0.12
HCFC2-202ENST00000544223 RAD21O60216 631 aa15.83■□□□□ 0.12
HCFC2-202ENST00000544223 TOB1P50616 345 aaPredicted RBP15.83■□□□□ 0.12
HCFC2-202ENST00000544223 AKAP17AQ02040 695 aaKnown RBP15.83■□□□□ 0.12
HCFC2-202ENST00000544223 SH3BP5LQ7L8J4 393 aa15.83■□□□□ 0.12
HCFC2-202ENST00000544223 SYAP1Q96A49 352 aaPredicted RBP15.83■□□□□ 0.12
HCFC2-202ENST00000544223 OSBPL5Q9H0X9 879 aaPredicted RBP15.83■□□□□ 0.12
HCFC2-202ENST00000544223 FAM198AQ9UFP1 575 aa15.83■□□□□ 0.12
HCFC2-202ENST00000544223 MAD2L2Q9UI95 211 aa15.83■□□□□ 0.12
HCFC2-202ENST00000544223 NID2Q14112 1375 aa15.82■□□□□ 0.12
HCFC2-202ENST00000544223 FRMPD2Q68DX3 1309 aaPredicted RBP15.82■□□□□ 0.12
HCFC2-202ENST00000544223 PCP11498 1178 aaKnown RBP15.82■□□□□ 0.12
HCFC2-202ENST00000544223 GRIN1Q05586 938 aa15.82■□□□□ 0.12
HCFC2-202ENST00000544223 ANO1Q5XXA6 986 aa15.82■□□□□ 0.12
HCFC2-202ENST00000544223 CDAN1Q8IWY9 1227 aa15.82■□□□□ 0.12
HCFC2-202ENST00000544223 DNAJC18Q9H819 358 aa15.82■□□□□ 0.12
HCFC2-202ENST00000544223 CABP5Q9NP86 173 aa15.82■□□□□ 0.12
HCFC2-202ENST00000544223 FOCADQ5VW36 1801 aa15.82■□□□□ 0.12
HCFC2-202ENST00000544223 QSER1Q2KHR3 1735 aa15.82■□□□□ 0.12
HCFC2-202ENST00000544223 CYTH3O43739 400 aa15.82■□□□□ 0.12
HCFC2-202ENST00000544223 FSIP1Q8NA03 581 aa15.82■□□□□ 0.12
HCFC2-202ENST00000544223 UBA5Q9GZZ9 404 aa15.82■□□□□ 0.12
HCFC2-202ENST00000544223 TSPY26PQ9H489 355 aa15.82■□□□□ 0.12
HCFC2-202ENST00000544223 RTEL1Q9NZ71 1219 aa15.82■□□□□ 0.12
HCFC2-202ENST00000544223 ZNF646O15015 1829 aaPredicted RBP15.81■□□□□ 0.12
HCFC2-202ENST00000544223 STK36Q9NRP7 1315 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 CFAP100Q494V2 611 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 TYW1BQ6NUM6 668 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 HHIPL2Q6UWX4 724 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 HOMER1Q86YM7 354 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 NOSTRINQ8IVI9 506 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 RASGRP4Q8TDF6 673 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 MTA3Q9BTC8 594 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 PCDHB6Q9Y5E3 794 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 USP17L5A8MUK1 530 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 SPTLC2O15270 562 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 DDAH1O94760 285 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 U2AF2P26368 475 aaKnown RBP eCLIP15.81■□□□□ 0.12
HCFC2-202ENST00000544223 NDUFA8P51970 172 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 SNW1Q13573 536 aaKnown RBP15.81■□□□□ 0.12
HCFC2-202ENST00000544223 CCDC93Q567U6 631 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 ZDHHC15Q96MV8 337 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 NUP62CLQ9H1M0 184 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 SERPINB13Q9UIV8 391 aa15.81■□□□□ 0.12
HCFC2-202ENST00000544223 TCP10L2B9ZVM9 353 aa15.8■□□□□ 0.12
HCFC2-202ENST00000544223 SHMT1P34896 483 aa15.8■□□□□ 0.12
HCFC2-202ENST00000544223 BRAPQ7Z569 592 aa15.8■□□□□ 0.12
HCFC2-202ENST00000544223 RNF26Q9BY78 433 aaPredicted RBP15.8■□□□□ 0.12
HCFC2-202ENST00000544223 TNMDQ9H2S6 317 aa15.8■□□□□ 0.12
HCFC2-202ENST00000544223 GABPAQ06546 454 aa15.79■□□□□ 0.12
HCFC2-202ENST00000544223 DGKHQ86XP1 1220 aa15.79■□□□□ 0.12
HCFC2-202ENST00000544223 MAP3K14Q99558 947 aa15.79■□□□□ 0.12
HCFC2-202ENST00000544223 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.79■□□□□ 0.12
HCFC2-202ENST00000544223 PRPF3O43395 683 aaKnown RBP15.79■□□□□ 0.12
HCFC2-202ENST00000544223 GDF11O95390 407 aa15.79■□□□□ 0.12
HCFC2-202ENST00000544223 NPY5RQ15761 445 aa15.79■□□□□ 0.12
HCFC2-202ENST00000544223 CLIP2Q9UDT6 1046 aa15.79■□□□□ 0.12
HCFC2-202ENST00000544223 SUGT1Q9Y2Z0 365 aa15.79■□□□□ 0.12
HCFC2-202ENST00000544223 MYH8P13535 1937 aa15.79■□□□□ 0.12
HCFC2-202ENST00000544223 JAG1P78504 1218 aa15.78■□□□□ 0.12
HCFC2-202ENST00000544223 TMED8Q6PL24 325 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms