RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TDRD10Q5VZ19 366 aaKnown RBP5.4□□□□□ -1.54
SCFD1-207ENST00000544052 SMG8Q8ND04 991 aaKnown RBP5.4□□□□□ -1.54
SCFD1-207ENST00000544052 BAHD1Q8TBE0 780 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-207ENST00000544052 ZNF507Q8TCN5 953 aa5.4□□□□□ -1.54
SCFD1-207ENST00000544052 GPATCH3Q96I76 525 aa5.4□□□□□ -1.54
SCFD1-207ENST00000544052 SLC6A18Q96N87 628 aa5.4□□□□□ -1.54
SCFD1-207ENST00000544052 ATXN3LQ9H3M9 355 aa5.4□□□□□ -1.54
SCFD1-207ENST00000544052 PHAXQ9H814 394 aaKnown RBP5.4□□□□□ -1.54
SCFD1-207ENST00000544052 ZMYM5Q9UJ78 669 aa5.4□□□□□ -1.54
SCFD1-207ENST00000544052 RNGTTO60942 597 aaKnown RBP5.39□□□□□ -1.55
SCFD1-207ENST00000544052 CDC45O75419 566 aa5.39□□□□□ -1.55
SCFD1-207ENST00000544052 UBOX5O94941 541 aa5.39□□□□□ -1.55
SCFD1-207ENST00000544052 TIAF1O95411 115 aa5.39□□□□□ -1.55
SCFD1-207ENST00000544052 HMGB1P09429 215 aaKnown RBP5.39□□□□□ -1.55
SCFD1-207ENST00000544052 ASPAP45381 313 aa5.39□□□□□ -1.55
SCFD1-207ENST00000544052 SSRP1Q08945 709 aaKnown RBP5.39□□□□□ -1.55
SCFD1-207ENST00000544052 SLC6A19Q695T7 634 aa5.39□□□□□ -1.55
SCFD1-207ENST00000544052 CDC37L1Q7L3B6 337 aa5.39□□□□□ -1.55
SCFD1-207ENST00000544052 DCAF11Q8TEB1 546 aa5.39□□□□□ -1.55
SCFD1-207ENST00000544052 ZNF214Q9UL59 606 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-207ENST00000544052 C9IYK1 514 aa5.39□□□□□ -1.55
SCFD1-207ENST00000544052 TP53P04637 393 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-207ENST00000544052 ELNP15502 786 aa5.39□□□□□ -1.55
SCFD1-207ENST00000544052 SLC7A5Q01650 507 aa5.39□□□□□ -1.55
SCFD1-207ENST00000544052 FDX2Q6P4F2 183 aa5.39□□□□□ -1.55
SCFD1-207ENST00000544052 EEPD1Q7L9B9 569 aa5.39□□□□□ -1.55
SCFD1-207ENST00000544052 PPFIBP1Q86W92 1011 aa5.39□□□□□ -1.55
SCFD1-207ENST00000544052 C2CD4AQ8NCU7 369 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-207ENST00000544052 ST13P5Q8NFI4 369 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-207ENST00000544052 MRPL18Q9H0U6 180 aaKnown RBP5.39□□□□□ -1.55
SCFD1-207ENST00000544052 RGS13O14921 159 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 SUSD5O60279 629 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 TKFCQ3LXA3 575 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 C2orf27AQ580R0 203 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 PLEKHG4Q58EX7 1191 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 APPBP2Q92624 585 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 ZNF512BQ96KM6 892 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-207ENST00000544052 PIDD1Q9HB75 910 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 LGR6Q9HBX8 967 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 SSU72Q9NP77 194 aaKnown RBP5.38□□□□□ -1.55
SCFD1-207ENST00000544052 TMEM260Q9NX78 707 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 RB1CC1Q8TDY2 1594 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 SPDYE3A6NKU9 549 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 F8W735 103 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-207ENST00000544052 CLSTN1O94985 981 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 SPATA31C1P0DKV0 1188 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 GBP1P32455 592 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 NCAPHQ15003 741 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 SLC10A6Q3KNW5 377 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 SMYD4Q8IYR2 804 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-207ENST00000544052 THAP3Q8WTV1 239 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-207ENST00000544052 CCDC74BQ96LY2 380 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 GSX1Q9H4S2 264 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-207ENST00000544052 PTCH2Q9Y6C5 1203 aa5.38□□□□□ -1.55
SCFD1-207ENST00000544052 PREPP48147 710 aa5.37□□□□□ -1.55
SCFD1-207ENST00000544052 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.37□□□□□ -1.55
SCFD1-207ENST00000544052 JMYQ8N9B5 988 aa5.37□□□□□ -1.55
SCFD1-207ENST00000544052 LGR4Q9BXB1 951 aa5.37□□□□□ -1.55
SCFD1-207ENST00000544052 SUCOQ9UBS9 1254 aaKnown RBP5.37□□□□□ -1.55
SCFD1-207ENST00000544052 FAM153BP0C7A2 387 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 RAB6AP20340 208 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 GATA4P43694 442 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 PMS1P54277 932 aaKnown RBP5.36□□□□□ -1.55
SCFD1-207ENST00000544052 DOC2BQ14184 412 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 AXDND1Q5T1B0 1012 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-207ENST00000544052 DCAF15Q66K64 600 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 HOMER1Q86YM7 354 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 TMEM130Q8N3G9 435 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 RIN3Q8TB24 985 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 CYB5D2Q8WUJ1 264 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 USP21Q9UK80 565 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 ADCY3O60266 1144 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 CST3P01034 146 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-207ENST00000544052 EPHX1P07099 455 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 CCNFP41002 786 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 CDPF1Q6NVV7 123 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 ARMCX6Q7L4S7 300 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 KCT2Q8NC54 265 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 PPP1R13LQ8WUF5 828 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 DHRS1Q96LJ7 313 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 SPATA9Q9BWV2 254 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 SEMA6BQ9H3T3 888 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 DAGLAQ9Y4D2 1042 aa5.36□□□□□ -1.55
SCFD1-207ENST00000544052 PPP1R12AO14974 1030 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-207ENST00000544052 DYNC1LI2O43237 492 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-207ENST00000544052 CBFA2T2O43439 604 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 CLEC3AO75596 197 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 CAP2P40123 477 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 GYS2P54840 703 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 SV2CQ496J9 727 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 PRRT3Q5FWE3 981 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 ANKRD34AQ69YU3 496 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 FILIP1Q7Z7B0 1213 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 KIAA0907Q7Z7F0 614 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-207ENST00000544052 FGD4Q96M96 766 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 HAUS7Q99871 368 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 FOXQ1Q9C009 403 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 SEMA6CQ9H3T2 930 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 AKTIPQ9H8T0 292 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 IFT57Q9NWB7 429 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms