RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CFAP100Q494V2 611 aa23.01■■□□□ 1.27
COPS7A-218ENST00000543939 PNMA1Q8ND90 353 aa23.01■■□□□ 1.27
COPS7A-218ENST00000543939 PPP1R1BQ9UD71 204 aaPredicted RBP23.01■■□□□ 1.27
COPS7A-218ENST00000543939 SWAP70Q9UH65 585 aa23.01■■□□□ 1.27
COPS7A-218ENST00000543939 SERPINB13Q9UIV8 391 aa23.01■■□□□ 1.27
COPS7A-218ENST00000543939 ZNRF3Q9ULT6 936 aa23.01■■□□□ 1.27
COPS7A-218ENST00000543939 PLIN4Q96Q06 1357 aa23.01■■□□□ 1.27
COPS7A-218ENST00000543939 PRPF3O43395 683 aaKnown RBP23■■□□□ 1.27
COPS7A-218ENST00000543939 NIM1KQ8IY84 436 aa23■■□□□ 1.27
COPS7A-218ENST00000543939 FAM198AQ9UFP1 575 aa23■■□□□ 1.27
COPS7A-218ENST00000543939 PSDA5PKW4 1024 aaPredicted RBP22.99■■□□□ 1.27
COPS7A-218ENST00000543939 HLA-DOAP06340 250 aa22.99■■□□□ 1.27
COPS7A-218ENST00000543939 NOVP48745 357 aa22.99■■□□□ 1.27
COPS7A-218ENST00000543939 ZNF445P59923 1031 aa22.99■■□□□ 1.27
COPS7A-218ENST00000543939 ZFPM1Q8IX07 1006 aa22.99■■□□□ 1.27
COPS7A-218ENST00000543939 USP28Q96RU2 1077 aa22.99■■□□□ 1.27
COPS7A-218ENST00000543939 TMEM47Q9BQJ4 181 aa22.99■■□□□ 1.27
COPS7A-218ENST00000543939 EHD4Q9H223 541 aa22.99■■□□□ 1.27
COPS7A-218ENST00000543939 RCOR1Q9UKL0 485 aa22.99■■□□□ 1.27
COPS7A-218ENST00000543939 KIF5BP33176 963 aa22.99■■□□□ 1.27
COPS7A-218ENST00000543939 CACNB3P54284 484 aa22.99■■□□□ 1.27
COPS7A-218ENST00000543939 SRBD1Q8N5C6 995 aaKnown RBP22.99■■□□□ 1.27
COPS7A-218ENST00000543939 TAOK3Q9H2K8 898 aa22.99■■□□□ 1.27
COPS7A-218ENST00000543939 DHX36Q9H2U1 1008 aaKnown RBP22.99■■□□□ 1.27
COPS7A-218ENST00000543939 CNTNAP5Q8WYK1 1306 aa22.98■■□□□ 1.27
COPS7A-218ENST00000543939 GREB1LQ9C091 1923 aaPredicted RBP22.98■■□□□ 1.27
COPS7A-218ENST00000543939 AKAP17AQ02040 695 aaKnown RBP22.98■■□□□ 1.27
COPS7A-218ENST00000543939 GRM4Q14833 912 aa22.98■■□□□ 1.27
COPS7A-218ENST00000543939 PKN1Q16512 942 aa22.98■■□□□ 1.27
COPS7A-218ENST00000543939 MYSM1Q5VVJ2 828 aa22.98■■□□□ 1.27
COPS7A-218ENST00000543939 SYAP1Q96A49 352 aaPredicted RBP22.98■■□□□ 1.27
COPS7A-218ENST00000543939 PRMT6Q96LA8 375 aaPredicted RBP22.98■■□□□ 1.27
COPS7A-218ENST00000543939 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.98■■□□□ 1.27
COPS7A-218ENST00000543939 STX8Q9UNK0 236 aa22.98■■□□□ 1.27
COPS7A-218ENST00000543939 U2AF2P26368 475 aaKnown RBP eCLIP22.97■■□□□ 1.27
COPS7A-218ENST00000543939 SHMT1P34896 483 aa22.97■■□□□ 1.27
COPS7A-218ENST00000543939 FTOQ9C0B1 505 aaKnown RBP eCLIP22.97■■□□□ 1.27
COPS7A-218ENST00000543939 TDRD3Q9H7E2 651 aaKnown RBP22.97■■□□□ 1.27
COPS7A-218ENST00000543939 ISY1Q9ULR0 285 aaKnown RBP22.97■■□□□ 1.27
COPS7A-218ENST00000543939 GOLGA6L3A6NEY3 463 aa22.96■■□□□ 1.27
COPS7A-218ENST00000543939 MMP1P03956 469 aa22.96■■□□□ 1.27
COPS7A-218ENST00000543939 KLHL34Q8N239 644 aa22.96■■□□□ 1.27
COPS7A-218ENST00000543939 CEP95Q96GE4 821 aa22.96■■□□□ 1.27
COPS7A-218ENST00000543939 PGBD1Q96JS3 809 aa22.96■■□□□ 1.27
COPS7A-218ENST00000543939 RTEL1Q9NZ71 1219 aa22.96■■□□□ 1.27
COPS7A-218ENST00000543939 V9GY48 417 aaPredicted RBP22.96■■□□□ 1.27
COPS7A-218ENST00000543939 IGKV6D-41A0A0C4DH26 115 aa22.96■■□□□ 1.27
COPS7A-218ENST00000543939 NFKBIEO00221 500 aa22.96■■□□□ 1.27
COPS7A-218ENST00000543939 CEBPZQ03701 1054 aaKnown RBP22.96■■□□□ 1.27
COPS7A-218ENST00000543939 TCP10Q12799 353 aa22.96■■□□□ 1.27
COPS7A-218ENST00000543939 SH3BP5LQ7L8J4 393 aa22.96■■□□□ 1.27
COPS7A-218ENST00000543939 GAS2L3Q86XJ1 694 aa22.96■■□□□ 1.27
COPS7A-218ENST00000543939 HDAC9Q9UKV0 1011 aa22.96■■□□□ 1.27
COPS7A-218ENST00000543939 ARFGEF1Q9Y6D6 1849 aa22.95■■□□□ 1.26
COPS7A-218ENST00000543939 BAZ2BQ9UIF8 2168 aaKnown RBP22.95■■□□□ 1.26
COPS7A-218ENST00000543939 DDTLA6NHG4 134 aaPredicted RBP22.95■■□□□ 1.26
COPS7A-218ENST00000543939 ENTPD3O75355 529 aa22.95■■□□□ 1.26
COPS7A-218ENST00000543939 TOP1P11387 765 aaKnown RBP22.95■■□□□ 1.26
COPS7A-218ENST00000543939 AKR1B1P15121 316 aa22.95■■□□□ 1.26
COPS7A-218ENST00000543939 TPRNQ4KMQ1 711 aa22.95■■□□□ 1.26
COPS7A-218ENST00000543939 AGBL3Q8NEM8 1001 aa22.95■■□□□ 1.26
COPS7A-218ENST00000543939 TAOK2Q9UL54 1235 aa22.95■■□□□ 1.26
COPS7A-218ENST00000543939 COL2A1P02458 1487 aaPredicted RBP22.95■■□□□ 1.26
COPS7A-218ENST00000543939 SPDYE2BA6NHP3 402 aa22.94■■□□□ 1.26
COPS7A-218ENST00000543939 SPDYE6P0CI01 402 aa22.94■■□□□ 1.26
COPS7A-218ENST00000543939 CXCL9Q07325 125 aa22.94■■□□□ 1.26
COPS7A-218ENST00000543939 PI4KBQ9UBF8 816 aa22.94■■□□□ 1.26
COPS7A-218ENST00000543939 MAD2L2Q9UI95 211 aa22.94■■□□□ 1.26
COPS7A-218ENST00000543939 KCNJ14Q9UNX9 436 aa22.94■■□□□ 1.26
COPS7A-218ENST00000543939 BCS1LQ9Y276 419 aa22.94■■□□□ 1.26
COPS7A-218ENST00000543939 ZBTB12Q9Y330 459 aaPredicted RBP22.94■■□□□ 1.26
COPS7A-218ENST00000543939 GNAQP50148 359 aa22.94■■□□□ 1.26
COPS7A-218ENST00000543939 SAFBQ15424 915 aaKnown RBP eCLIP22.94■■□□□ 1.26
COPS7A-218ENST00000543939 STAG2Q8N3U4 1231 aa22.94■■□□□ 1.26
COPS7A-218ENST00000543939 SHISA4Q96DD7 197 aa22.94■■□□□ 1.26
COPS7A-218ENST00000543939 DNAJC18Q9H819 358 aa22.94■■□□□ 1.26
COPS7A-218ENST00000543939 POLR3EQ9NVU0 708 aa22.94■■□□□ 1.26
COPS7A-218ENST00000543939 MTMR4Q9NYA4 1195 aa22.94■■□□□ 1.26
COPS7A-218ENST00000543939 ATRNL1Q5VV63 1379 aa22.93■■□□□ 1.26
COPS7A-218ENST00000543939 LTBP3Q9NS15 1303 aa22.93■■□□□ 1.26
COPS7A-218ENST00000543939 hCG_1642624A0A1W2PR95 340 aa22.93■■□□□ 1.26
COPS7A-218ENST00000543939 GOLGA6L4A6NEF3 574 aa22.93■■□□□ 1.26
COPS7A-218ENST00000543939 OGFOD1Q8N543 542 aa22.93■■□□□ 1.26
COPS7A-218ENST00000543939 PALM3A6NDB9 673 aaPredicted RBP22.92■■□□□ 1.26
COPS7A-218ENST00000543939 XBP1P17861 261 aa22.92■■□□□ 1.26
COPS7A-218ENST00000543939 NASPP49321 788 aaPredicted RBP22.92■■□□□ 1.26
COPS7A-218ENST00000543939 GNL2Q13823 731 aaKnown RBP22.92■■□□□ 1.26
COPS7A-218ENST00000543939 CCDC183Q5T5S1 534 aa22.92■■□□□ 1.26
COPS7A-218ENST00000543939 DIS3L2Q8IYB7 885 aaKnown RBP22.92■■□□□ 1.26
COPS7A-218ENST00000543939 JDP2Q8WYK2 163 aa22.92■■□□□ 1.26
COPS7A-218ENST00000543939 CCDC17Q96LX7 622 aa22.92■■□□□ 1.26
COPS7A-218ENST00000543939 FOXP1Q9H334 677 aaPredicted RBP22.92■■□□□ 1.26
COPS7A-218ENST00000543939 CLIC4Q9Y696 253 aa22.92■■□□□ 1.26
COPS7A-218ENST00000543939 BTBD18B2RXH4 712 aa22.91■■□□□ 1.26
COPS7A-218ENST00000543939 YEATS4O95619 227 aa22.91■■□□□ 1.26
COPS7A-218ENST00000543939 DLGAP5Q15398 846 aa22.91■■□□□ 1.26
COPS7A-218ENST00000543939 L1TD1Q5T7N2 865 aaKnown RBP22.91■■□□□ 1.26
COPS7A-218ENST00000543939 CIAPIN1Q6FI81 312 aa22.91■■□□□ 1.26
COPS7A-218ENST00000543939 METTL16Q86W50 562 aaKnown RBP22.91■■□□□ 1.26
COPS7A-218ENST00000543939 FOXP4Q8IVH2 680 aaPredicted RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms