RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 EPB41L2O43491 1005 aaKnown RBP16.11■□□□□ 0.17
SP140-213ENST00000543928 KIF23Q02241 960 aaPredicted RBP16.11■□□□□ 0.17
SP140-213ENST00000543928 ICA1Q05084 483 aa16.11■□□□□ 0.17
SP140-213ENST00000543928 STOX1Q6ZVD7 989 aa16.11■□□□□ 0.17
SP140-213ENST00000543928 NKX2-3Q8TAU0 364 aa16.11■□□□□ 0.17
SP140-213ENST00000543928 ESR2Q92731 530 aa16.11■□□□□ 0.17
SP140-213ENST00000543928 WDR18Q9BV38 432 aa16.11■□□□□ 0.17
SP140-213ENST00000543928 USP26Q9BXU7 913 aa16.11■□□□□ 0.17
SP140-213ENST00000543928 KRT23Q9C075 422 aa16.11■□□□□ 0.17
SP140-213ENST00000543928 CNNM2Q9H8M5 875 aa16.11■□□□□ 0.17
SP140-213ENST00000543928 KANSL2Q9H9L4 492 aa16.11■□□□□ 0.17
SP140-213ENST00000543928 KCNH4Q9UQ05 1017 aa16.11■□□□□ 0.17
SP140-213ENST00000543928 GREB1LQ9C091 1923 aaPredicted RBP16.11■□□□□ 0.17
SP140-213ENST00000543928 PLIN4Q96Q06 1357 aa16.11■□□□□ 0.17
SP140-213ENST00000543928 IGKV6D-41A0A0C4DH26 115 aa16.1■□□□□ 0.17
SP140-213ENST00000543928 MANSC4A6NHS7 340 aaPredicted RBP16.1■□□□□ 0.17
SP140-213ENST00000543928 CXCL11O14625 94 aa16.1■□□□□ 0.17
SP140-213ENST00000543928 EIF5BO60841 1220 aaKnown RBP16.1■□□□□ 0.17
SP140-213ENST00000543928 KDM4AO75164 1064 aa16.1■□□□□ 0.17
SP140-213ENST00000543928 SEC24BO95487 1268 aa16.1■□□□□ 0.17
SP140-213ENST00000543928 HSPA4P34932 840 aa16.1■□□□□ 0.17
SP140-213ENST00000543928 GTF2A2P52657 109 aa16.1■□□□□ 0.17
SP140-213ENST00000543928 TRDNQ13061 729 aa16.1■□□□□ 0.17
SP140-213ENST00000543928 SNAPC2Q13487 334 aa16.1■□□□□ 0.17
SP140-213ENST00000543928 ACER1Q8TDN7 264 aa16.1■□□□□ 0.17
SP140-213ENST00000543928 MS4A4AQ96JQ5 239 aa16.1■□□□□ 0.17
SP140-213ENST00000543928 CCL15-CCL14A0A0B4J2E2 113 aa16.09■□□□□ 0.17
SP140-213ENST00000543928 USP17L10C9JJH3 530 aa16.09■□□□□ 0.17
SP140-213ENST00000543928 NMT2O60551 498 aa16.09■□□□□ 0.17
SP140-213ENST00000543928 EEF2P13639 858 aaKnown RBP16.09■□□□□ 0.17
SP140-213ENST00000543928 MAP2K2P36507 400 aa16.09■□□□□ 0.17
SP140-213ENST00000543928 NT5C2P49902 561 aa16.09■□□□□ 0.17
SP140-213ENST00000543928 ATP2B2Q01814 1243 aa16.09■□□□□ 0.17
SP140-213ENST00000543928 MTMR2Q13614 643 aa16.09■□□□□ 0.17
SP140-213ENST00000543928 CCL15Q16663 113 aa16.09■□□□□ 0.17
SP140-213ENST00000543928 RALYLQ86SE5 291 aaKnown RBP16.09■□□□□ 0.17
SP140-213ENST00000543928 SIAH1Q8IUQ4 282 aa16.09■□□□□ 0.17
SP140-213ENST00000543928 RASEFQ8IZ41 740 aa16.09■□□□□ 0.17
SP140-213ENST00000543928 CEP95Q96GE4 821 aa16.09■□□□□ 0.17
SP140-213ENST00000543928 FEZ1Q99689 392 aa16.09■□□□□ 0.17
SP140-213ENST00000543928 A0A0G2JLL6 359 aaPredicted RBP16.08■□□□□ 0.16
SP140-213ENST00000543928 A0A1W2PRG0 241 aa16.08■□□□□ 0.16
SP140-213ENST00000543928 CETPP11597 493 aa16.08■□□□□ 0.16
SP140-213ENST00000543928 ZKSCAN1P17029 563 aaPredicted RBP16.08■□□□□ 0.16
SP140-213ENST00000543928 BACE1P56817 501 aa16.08■□□□□ 0.16
SP140-213ENST00000543928 SREBF2Q12772 1141 aa16.08■□□□□ 0.16
SP140-213ENST00000543928 PRRT2Q7Z6L0 340 aaPredicted RBP16.08■□□□□ 0.16
SP140-213ENST00000543928 NCOA7Q8NI08 942 aa16.08■□□□□ 0.16
SP140-213ENST00000543928 BRI3BPQ8WY22 251 aa16.08■□□□□ 0.16
SP140-213ENST00000543928 ARHGEF10LQ9HCE6 1279 aa16.08■□□□□ 0.16
SP140-213ENST00000543928 IL17RBQ9NRM6 502 aa16.08■□□□□ 0.16
SP140-213ENST00000543928 MTMR4Q9NYA4 1195 aa16.08■□□□□ 0.16
SP140-213ENST00000543928 ZSWIM5Q9P217 1185 aa16.08■□□□□ 0.16
SP140-213ENST00000543928 THSD7BQ9C0I4 1608 aa16.08■□□□□ 0.16
SP140-213ENST00000543928 PTPRFP10586 1907 aa16.07■□□□□ 0.16
SP140-213ENST00000543928 CEP350Q5VT06 3117 aa16.07■□□□□ 0.16
SP140-213ENST00000543928 C19orf81C9J6K1 198 aa16.07■□□□□ 0.16
SP140-213ENST00000543928 MCCP23508 829 aa16.07■□□□□ 0.16
SP140-213ENST00000543928 HMGCS2P54868 508 aa16.07■□□□□ 0.16
SP140-213ENST00000543928 DGKZQ13574 1117 aa16.07■□□□□ 0.16
SP140-213ENST00000543928 ZYXQ15942 572 aaKnown RBP16.07■□□□□ 0.16
SP140-213ENST00000543928 TSGA10IPQ3SY00 556 aa16.07■□□□□ 0.16
SP140-213ENST00000543928 KCNB2Q92953 911 aa16.07■□□□□ 0.16
SP140-213ENST00000543928 ZKSCAN3Q9BRR0 538 aa16.07■□□□□ 0.16
SP140-213ENST00000543928 KIAA1683Q9H0B3 1180 aa16.07■□□□□ 0.16
SP140-213ENST00000543928 TCP11L1Q9NUJ3 509 aa16.07■□□□□ 0.16
SP140-213ENST00000543928 NYAP2Q9P242 653 aa16.07■□□□□ 0.16
SP140-213ENST00000543928 TESPA1A2RU30 521 aaPredicted RBP16.06■□□□□ 0.16
SP140-213ENST00000543928 TTLL1O95922 423 aa16.06■□□□□ 0.16
SP140-213ENST00000543928 TM4SF4P48230 202 aa16.06■□□□□ 0.16
SP140-213ENST00000543928 INHBEP58166 350 aa16.06■□□□□ 0.16
SP140-213ENST00000543928 MOGSQ13724 837 aa16.06■□□□□ 0.16
SP140-213ENST00000543928 SH3D19Q5HYK7 790 aa16.06■□□□□ 0.16
SP140-213ENST00000543928 USP17L2Q6R6M4 530 aa16.06■□□□□ 0.16
SP140-213ENST00000543928 GADL1Q6ZQY3 521 aa16.06■□□□□ 0.16
SP140-213ENST00000543928 CYB5R4Q7L1T6 521 aa16.06■□□□□ 0.16
SP140-213ENST00000543928 IQCA1Q86XH1 822 aa16.06■□□□□ 0.16
SP140-213ENST00000543928 REM2Q8IYK8 340 aaPredicted RBP16.06■□□□□ 0.16
SP140-213ENST00000543928 SH2D4AQ9H788 454 aa16.06■□□□□ 0.16
SP140-213ENST00000543928 CLIP2Q9UDT6 1046 aa16.06■□□□□ 0.16
SP140-213ENST00000543928 STX8Q9UNK0 236 aa16.06■□□□□ 0.16
SP140-213ENST00000543928 TMX2Q9Y320 296 aa16.06■□□□□ 0.16
SP140-213ENST00000543928 SNX14Q9Y5W7 946 aa16.06■□□□□ 0.16
SP140-213ENST00000543928 USP14P54578 494 aa16.05■□□□□ 0.16
SP140-213ENST00000543928 KRT32Q14532 448 aa16.05■□□□□ 0.16
SP140-213ENST00000543928 ADCK5Q3MIX3 580 aa16.05■□□□□ 0.16
SP140-213ENST00000543928 PPP4R3BQ5MIZ7 849 aa16.05■□□□□ 0.16
SP140-213ENST00000543928 FASTKD5Q7L8L6 764 aaKnown RBP16.05■□□□□ 0.16
SP140-213ENST00000543928 MB21D2Q8IYB1 491 aaPredicted RBP16.05■□□□□ 0.16
SP140-213ENST00000543928 NEK1Q96PY6 1258 aa16.05■□□□□ 0.16
SP140-213ENST00000543928 ZSCAN10Q96SZ4 725 aaPredicted RBP16.05■□□□□ 0.16
SP140-213ENST00000543928 PTPN18Q99952 460 aa16.05■□□□□ 0.16
SP140-213ENST00000543928 EMILIN3Q9NT22 766 aa16.05■□□□□ 0.16
SP140-213ENST00000543928 TMOD4Q9NZQ9 345 aa16.05■□□□□ 0.16
SP140-213ENST00000543928 MYH4Q9Y623 1939 aa16.04■□□□□ 0.16
SP140-213ENST00000543928 IGF2BP3O00425 579 aaKnown RBP eCLIP16.04■□□□□ 0.16
SP140-213ENST00000543928 NOVP48745 357 aa16.04■□□□□ 0.16
SP140-213ENST00000543928 COL9A3Q14050 684 aaPredicted RBP16.04■□□□□ 0.16
SP140-213ENST00000543928 CCDC178Q5BJE1 867 aa16.04■□□□□ 0.16
SP140-213ENST00000543928 CHST3Q7LGC8 479 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms