RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ZNF444Q8N0Y2 327 aaPredicted RBP17.91■□□□□ 0.46
CD9-210ENST00000543916 FAM43AQ8N2R8 423 aa17.91■□□□□ 0.46
CD9-210ENST00000543916 ACER1Q8TDN7 264 aa17.91■□□□□ 0.46
CD9-210ENST00000543916 STAG1Q8WVM7 1258 aa17.91■□□□□ 0.46
CD9-210ENST00000543916 ANO2Q9NQ90 1003 aa17.91■□□□□ 0.46
CD9-210ENST00000543916 RNF186Q9NXI6 227 aa17.91■□□□□ 0.46
CD9-210ENST00000543916 U3KPZ7 1027 aaPredicted RBP17.91■□□□□ 0.46
CD9-210ENST00000543916 IGKV6D-41A0A0C4DH26 115 aa17.9■□□□□ 0.46
CD9-210ENST00000543916 A0A1W2PRG0 241 aa17.9■□□□□ 0.46
CD9-210ENST00000543916 USP17L10C9JJH3 530 aa17.9■□□□□ 0.46
CD9-210ENST00000543916 TRPA1O75762 1119 aa17.9■□□□□ 0.46
CD9-210ENST00000543916 HMGCS2P54868 508 aa17.9■□□□□ 0.46
CD9-210ENST00000543916 BACE1P56817 501 aa17.9■□□□□ 0.46
CD9-210ENST00000543916 ICA1Q05084 483 aa17.9■□□□□ 0.46
CD9-210ENST00000543916 SH3D19Q5HYK7 790 aa17.9■□□□□ 0.46
CD9-210ENST00000543916 AKNAD1Q5T1N1 836 aa17.9■□□□□ 0.46
CD9-210ENST00000543916 GPAT2Q6NUI2 795 aa17.9■□□□□ 0.46
CD9-210ENST00000543916 GADL1Q6ZQY3 521 aa17.9■□□□□ 0.46
CD9-210ENST00000543916 KIAA1211Q6ZU35 1233 aa17.9■□□□□ 0.46
CD9-210ENST00000543916 SIAH1Q8IUQ4 282 aa17.9■□□□□ 0.46
CD9-210ENST00000543916 NKX2-3Q8TAU0 364 aa17.9■□□□□ 0.46
CD9-210ENST00000543916 RBM8AQ9Y5S9 174 aaKnown RBP17.9■□□□□ 0.46
CD9-210ENST00000543916 NEDD4P46934 1319 aa17.9■□□□□ 0.46
CD9-210ENST00000543916 FOXN1O15353 648 aa17.89■□□□□ 0.45
CD9-210ENST00000543916 CYP21A2P08686 494 aa17.89■□□□□ 0.45
CD9-210ENST00000543916 TFAP4Q01664 338 aa17.89■□□□□ 0.45
CD9-210ENST00000543916 ZYXQ15942 572 aaKnown RBP17.89■□□□□ 0.45
CD9-210ENST00000543916 RRP12Q5JTH9 1297 aaKnown RBP17.89■□□□□ 0.45
CD9-210ENST00000543916 NEDD1Q8NHV4 660 aa17.89■□□□□ 0.45
CD9-210ENST00000543916 FEZ1Q99689 392 aa17.89■□□□□ 0.45
CD9-210ENST00000543916 BEGAINQ9BUH8 593 aa17.89■□□□□ 0.45
CD9-210ENST00000543916 TOMM22Q9NS69 142 aa17.89■□□□□ 0.45
CD9-210ENST00000543916 SAGE1Q9NXZ1 904 aa17.89■□□□□ 0.45
CD9-210ENST00000543916 TSKSQ9UJT2 592 aa17.89■□□□□ 0.45
CD9-210ENST00000543916 TAF6LQ9Y6J9 622 aa17.89■□□□□ 0.45
CD9-210ENST00000543916 RANBP6O60518 1105 aaKnown RBP17.88■□□□□ 0.45
CD9-210ENST00000543916 TSPY3P0CV98 308 aa17.88■□□□□ 0.45
CD9-210ENST00000543916 TSPY8P0CW00 308 aa17.88■□□□□ 0.45
CD9-210ENST00000543916 EEF2P13639 858 aaKnown RBP17.88■□□□□ 0.45
CD9-210ENST00000543916 TREML2Q5T2D2 321 aa17.88■□□□□ 0.45
CD9-210ENST00000543916 MFSD6Q6ZSS7 791 aa17.88■□□□□ 0.45
CD9-210ENST00000543916 FASTKD5Q7L8L6 764 aaKnown RBP17.88■□□□□ 0.45
CD9-210ENST00000543916 ANKRD23Q86SG2 305 aa17.88■□□□□ 0.45
CD9-210ENST00000543916 PROCA1Q8NCQ7 364 aaPredicted RBP17.88■□□□□ 0.45
CD9-210ENST00000543916 KIAA1683Q9H0B3 1180 aa17.88■□□□□ 0.45
CD9-210ENST00000543916 KANSL2Q9H9L4 492 aa17.88■□□□□ 0.45
CD9-210ENST00000543916 EMILIN3Q9NT22 766 aa17.88■□□□□ 0.45
CD9-210ENST00000543916 TSPY2A6NKD2 308 aa17.87■□□□□ 0.45
CD9-210ENST00000543916 C19orf81C9J6K1 198 aa17.87■□□□□ 0.45
CD9-210ENST00000543916 PDHXO00330 501 aa17.87■□□□□ 0.45
CD9-210ENST00000543916 CA12O43570 354 aa17.87■□□□□ 0.45
CD9-210ENST00000543916 ALDH1A1P00352 501 aa17.87■□□□□ 0.45
CD9-210ENST00000543916 PCP11498 1178 aaKnown RBP17.87■□□□□ 0.45
CD9-210ENST00000543916 OTUD7BQ6GQQ9 843 aa17.87■□□□□ 0.45
CD9-210ENST00000543916 CEP95Q96GE4 821 aa17.87■□□□□ 0.45
CD9-210ENST00000543916 R3HDMLQ9H3Y0 253 aa17.87■□□□□ 0.45
CD9-210ENST00000543916 RNF41Q9H4P4 317 aaPredicted RBP17.87■□□□□ 0.45
CD9-210ENST00000543916 ARHGEF10LQ9HCE6 1279 aa17.87■□□□□ 0.45
CD9-210ENST00000543916 AGTPBP1Q9UPW5 1226 aa17.87■□□□□ 0.45
CD9-210ENST00000543916 NMT2O60551 498 aa17.86■□□□□ 0.45
CD9-210ENST00000543916 TBC1D8O95759 1140 aa17.86■□□□□ 0.45
CD9-210ENST00000543916 ATP2B2Q01814 1243 aa17.86■□□□□ 0.45
CD9-210ENST00000543916 USP17L2Q6R6M4 530 aa17.86■□□□□ 0.45
CD9-210ENST00000543916 C12orf42Q96LP6 360 aa17.86■□□□□ 0.45
CD9-210ENST00000543916 CFHR5Q9BXR6 569 aa17.86■□□□□ 0.45
CD9-210ENST00000543916 ZCCHC17Q9NP64 241 aaKnown RBP17.86■□□□□ 0.45
CD9-210ENST00000543916 IL17RBQ9NRM6 502 aa17.86■□□□□ 0.45
CD9-210ENST00000543916 MTMR4Q9NYA4 1195 aa17.86■□□□□ 0.45
CD9-210ENST00000543916 TMOD4Q9NZQ9 345 aa17.86■□□□□ 0.45
CD9-210ENST00000543916 TMX2Q9Y320 296 aa17.86■□□□□ 0.45
CD9-210ENST00000543916 B4E1Z4 1266 aa17.85■□□□□ 0.45
CD9-210ENST00000543916 HSPA8P11142 646 aaKnown RBP17.85■□□□□ 0.45
CD9-210ENST00000543916 CRHR2Q13324 411 aa17.85■□□□□ 0.45
CD9-210ENST00000543916 NECTIN1Q15223 517 aa17.85■□□□□ 0.45
CD9-210ENST00000543916 TAF1CQ15572 869 aaPredicted RBP17.85■□□□□ 0.45
CD9-210ENST00000543916 PARP14Q460N5 1801 aa17.85■□□□□ 0.45
CD9-210ENST00000543916 KIAA1755Q5JYT7 1200 aa17.85■□□□□ 0.45
CD9-210ENST00000543916 NYAP2Q9P242 653 aa17.85■□□□□ 0.45
CD9-210ENST00000543916 SLC27A2O14975 620 aa17.84■□□□□ 0.45
CD9-210ENST00000543916 USP14P54578 494 aa17.84■□□□□ 0.45
CD9-210ENST00000543916 STOX1Q6ZVD7 989 aa17.84■□□□□ 0.45
CD9-210ENST00000543916 ESR2Q92731 530 aa17.84■□□□□ 0.45
CD9-210ENST00000543916 SH2D4AQ9H788 454 aa17.84■□□□□ 0.45
CD9-210ENST00000543916 CLIP2Q9UDT6 1046 aa17.84■□□□□ 0.45
CD9-210ENST00000543916 E7EWF7 191 aa17.83■□□□□ 0.44
CD9-210ENST00000543916 KDM4AO75164 1064 aa17.83■□□□□ 0.44
CD9-210ENST00000543916 TTLL1O95922 423 aa17.83■□□□□ 0.44
CD9-210ENST00000543916 VCAM1P19320 739 aa17.83■□□□□ 0.44
CD9-210ENST00000543916 CREB3L3Q68CJ9 461 aa17.83■□□□□ 0.44
CD9-210ENST00000543916 VCPKMTQ9H867 229 aa17.83■□□□□ 0.44
CD9-210ENST00000543916 CNNM2Q9H8M5 875 aa17.83■□□□□ 0.44
CD9-210ENST00000543916 SLC45A1Q9Y2W3 748 aa17.83■□□□□ 0.44
CD9-210ENST00000543916 RLFQ13129 1914 aa17.82■□□□□ 0.44
CD9-210ENST00000543916 ADGRA2Q96PE1 1338 aa17.82■□□□□ 0.44
CD9-210ENST00000543916 CYP2C8P10632 490 aa17.82■□□□□ 0.44
CD9-210ENST00000543916 NOVP48745 357 aa17.82■□□□□ 0.44
CD9-210ENST00000543916 CTCFP49711 727 aaPredicted RBP17.82■□□□□ 0.44
CD9-210ENST00000543916 LRRC47Q8N1G4 583 aaKnown RBP17.82■□□□□ 0.44
CD9-210ENST00000543916 MKL1Q969V6 931 aa17.82■□□□□ 0.44
CD9-210ENST00000543916 KRT23Q9C075 422 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms