RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 RGPD1P0DJD0 1748 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 GRIN2DO15399 1336 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 ZMYM6O95789 1325 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 ZNF213O14771 459 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 PAX7P23759 505 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 SLC39A6Q13433 755 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 NBPF14Q5TI25 921 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 LMBR1LQ6UX01 489 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 HDAC7Q8WUI4 952 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 SENP2Q9HC62 589 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 RIMBP3CA6NJZ7 1639 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 RIMBP3BA6NNM3 1639 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 RIMBP3Q9UFD9 1639 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 SPATA31D1Q6ZQQ2 1576 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 SETD1BQ9UPS6 1966 aaKnown RBP14.25□□□□□ -0.13
SMG8-202ENST00000543872 PDE2AO00408 941 aaPredicted RBP14.25□□□□□ -0.13
SMG8-202ENST00000543872 PPARAQ07869 468 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 CCDC70Q6NSX1 233 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 LRRC59Q96AG4 307 aaKnown RBP14.25□□□□□ -0.13
SMG8-202ENST00000543872 PSMB7Q99436 277 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 VEZTQ9HBM0 779 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 MYO1AQ9UBC5 1043 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 ITSN1Q15811 1721 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 PALLDQ8WX93 1383 aa14.25□□□□□ -0.13
SMG8-202ENST00000543872 CHUKO15111 745 aa14.24□□□□□ -0.13
SMG8-202ENST00000543872 MEFVO15553 781 aaPredicted RBP14.24□□□□□ -0.13
SMG8-202ENST00000543872 NDUFA10O95299 355 aa14.24□□□□□ -0.13
SMG8-202ENST00000543872 ERCC5P28715 1186 aaPredicted RBP14.24□□□□□ -0.13
SMG8-202ENST00000543872 SARNPP82979 210 aaKnown RBP14.24□□□□□ -0.13
SMG8-202ENST00000543872 CTNND2Q9UQB3 1225 aa14.24□□□□□ -0.13
SMG8-202ENST00000543872 MAPK8IP1Q9UQF2 711 aa14.24□□□□□ -0.13
SMG8-202ENST00000543872 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.24□□□□□ -0.13
SMG8-202ENST00000543872 SARSP49591 514 aaKnown RBP14.24□□□□□ -0.13
SMG8-202ENST00000543872 IFT88Q13099 833 aa14.24□□□□□ -0.13
SMG8-202ENST00000543872 C1orf141Q5JVX7 400 aa14.24□□□□□ -0.13
SMG8-202ENST00000543872 MB21D2Q8IYB1 491 aaPredicted RBP14.24□□□□□ -0.13
SMG8-202ENST00000543872 MIEF2Q96C03 454 aa14.24□□□□□ -0.13
SMG8-202ENST00000543872 FAXDC2Q96IV6 333 aa14.24□□□□□ -0.13
SMG8-202ENST00000543872 CTAGE1Q96RT6 745 aa14.24□□□□□ -0.13
SMG8-202ENST00000543872 DDX21Q9NR30 783 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMG8-202ENST00000543872 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.24□□□□□ -0.13
SMG8-202ENST00000543872 A0A087WZG4 1122 aa14.24□□□□□ -0.13
SMG8-202ENST00000543872 FAM237AA0A1B0GTK4 181 aa14.24□□□□□ -0.13
SMG8-202ENST00000543872 MACROD2A1Z1Q3 448 aa14.24□□□□□ -0.13
SMG8-202ENST00000543872 RFX5P48382 616 aaPredicted RBP14.24□□□□□ -0.13
SMG8-202ENST00000543872 FNTAP49354 379 aa14.24□□□□□ -0.13
SMG8-202ENST00000543872 ZBTB12Q9Y330 459 aaPredicted RBP14.24□□□□□ -0.13
SMG8-202ENST00000543872 REXO2Q9Y3B8 237 aaKnown RBP14.24□□□□□ -0.13
SMG8-202ENST00000543872 OPA1O60313 960 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 ATP2C2O75185 946 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 PBX1P40424 430 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 CDR1P51861 262 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 KRT31Q15323 416 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 TSR1Q2NL82 804 aaKnown RBP14.23□□□□□ -0.13
SMG8-202ENST00000543872 CCDC51Q96ER9 411 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 DMGDHQ9UI17 866 aaKnown RBP14.23□□□□□ -0.13
SMG8-202ENST00000543872 PCDHB6Q9Y5E3 794 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 TULP1O00294 542 aaPredicted RBP14.23□□□□□ -0.13
SMG8-202ENST00000543872 GUCY1A3Q02108 690 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 CKAP4Q07065 602 aaKnown RBP14.23□□□□□ -0.13
SMG8-202ENST00000543872 E2F5Q15329 346 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 SAFBQ15424 915 aaKnown RBP eCLIP14.23□□□□□ -0.13
SMG8-202ENST00000543872 SCLT1Q96NL6 688 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 KLC4Q9NSK0 619 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 FAM184BQ9ULE4 1060 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 UTYO14607 1347 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 CDKL5O76039 1030 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 IDEP14735 1019 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 SEC24CP53992 1094 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 INHBEP58166 350 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 UBXN1Q04323 297 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 CEP85LQ5SZL2 805 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 NKX2-3Q8TAU0 364 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 CSRNP2Q9H175 543 aa14.23□□□□□ -0.13
SMG8-202ENST00000543872 CEMIPQ8WUJ3 1361 aa14.22□□□□□ -0.13
SMG8-202ENST00000543872 GOLGA8KD6RF30 607 aa14.22□□□□□ -0.13
SMG8-202ENST00000543872 DIS3L2Q8IYB7 885 aaKnown RBP14.22□□□□□ -0.13
SMG8-202ENST00000543872 RBM28Q9NW13 759 aaKnown RBP14.22□□□□□ -0.13
SMG8-202ENST00000543872 A2ML1A8K2U0 1454 aa14.22□□□□□ -0.13
SMG8-202ENST00000543872 GOLGA8AA7E2F4 631 aa14.22□□□□□ -0.13
SMG8-202ENST00000543872 HSF2BPO75031 334 aa14.22□□□□□ -0.13
SMG8-202ENST00000543872 NR5A1Q13285 461 aa14.22□□□□□ -0.13
SMG8-202ENST00000543872 SF3B2Q13435 895 aaKnown RBP14.22□□□□□ -0.13
SMG8-202ENST00000543872 NOSTRINQ8IVI9 506 aa14.22□□□□□ -0.13
SMG8-202ENST00000543872 CMTR1Q8N1G2 835 aaKnown RBP14.22□□□□□ -0.13
SMG8-202ENST00000543872 TRIML1Q8N9V2 468 aa14.22□□□□□ -0.13
SMG8-202ENST00000543872 EPSTI1Q96J88 318 aa14.22□□□□□ -0.13
SMG8-202ENST00000543872 LRRC1Q9BTT6 524 aa14.22□□□□□ -0.13
SMG8-202ENST00000543872 FBXO2Q9UK22 296 aaPredicted RBP14.22□□□□□ -0.13
SMG8-202ENST00000543872 DUSP10Q9Y6W6 482 aa14.22□□□□□ -0.13
SMG8-202ENST00000543872 RNMTO43148 476 aaKnown RBP14.21□□□□□ -0.13
SMG8-202ENST00000543872 PTPREP23469 700 aa14.21□□□□□ -0.13
SMG8-202ENST00000543872 TOB1P50616 345 aaPredicted RBP14.21□□□□□ -0.13
SMG8-202ENST00000543872 CCDC40Q4G0X9 1142 aa14.21□□□□□ -0.13
SMG8-202ENST00000543872 IQCA1Q86XH1 822 aa14.21□□□□□ -0.13
SMG8-202ENST00000543872 TSEN2Q8NCE0 465 aaKnown RBP14.21□□□□□ -0.13
SMG8-202ENST00000543872 ZNF594Q96JF6 807 aaPredicted RBP14.21□□□□□ -0.13
SMG8-202ENST00000543872 CCDC114Q96M63 670 aa14.21□□□□□ -0.13
SMG8-202ENST00000543872 SMARCAL1Q9NZC9 954 aa14.21□□□□□ -0.13
SMG8-202ENST00000543872 TARSL2A2RTX5 802 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms